RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 MSMBP08118 114 aa13.08□□□□□ -0.32
NEK3-206ENST00000611833 SMIM17P0DL12 118 aa13.08□□□□□ -0.32
NEK3-206ENST00000611833 S100A4P26447 101 aaKnown RBP13.08□□□□□ -0.32
NEK3-206ENST00000611833 DEFB1P60022 68 aa13.08□□□□□ -0.32
NEK3-206ENST00000611833 ZFAND2AQ8N6M9 145 aa13.08□□□□□ -0.32
NEK3-206ENST00000611833 PEF1Q9UBV8 284 aaKnown RBP13.08□□□□□ -0.32
NEK3-206ENST00000611833 SOCS3O14543 225 aa13.07□□□□□ -0.32
NEK3-206ENST00000611833 ATP5LO75964 103 aa13.07□□□□□ -0.32
NEK3-206ENST00000611833 BRI3O95415 125 aa13.07□□□□□ -0.32
NEK3-206ENST00000611833 LCNL1Q6ZST4 164 aa13.07□□□□□ -0.32
NEK3-206ENST00000611833 MYOZ3Q8TDC0 251 aa13.07□□□□□ -0.32
NEK3-206ENST00000611833 PRSS47A8MTI9 375 aa13.07□□□□□ -0.32
NEK3-206ENST00000611833 M0R381 172 aa13.07□□□□□ -0.32
NEK3-206ENST00000611833 IGKCP01834 107 aa13.07□□□□□ -0.32
NEK3-206ENST00000611833 HSD52Q0P140 79 aa13.07□□□□□ -0.32
NEK3-206ENST00000611833 PIEZO1Q92508 2521 aa13.06□□□□□ -0.32
NEK3-206ENST00000611833 A6NDN8 102 aa13.06□□□□□ -0.32
NEK3-206ENST00000611833 PSMG4Q5JS54 123 aa13.06□□□□□ -0.32
NEK3-206ENST00000611833 MRAP2Q96G30 205 aa13.06□□□□□ -0.32
NEK3-206ENST00000611833 ZMAT4Q9H898 229 aa13.06□□□□□ -0.32
NEK3-206ENST00000611833 CBY1Q9Y3M2 126 aa13.06□□□□□ -0.32
NEK3-206ENST00000611833 MAP1AP78559 2803 aaPredicted RBP13.06□□□□□ -0.32
NEK3-206ENST00000611833 A0A0G2JLM5 398 aa13.06□□□□□ -0.32
NEK3-206ENST00000611833 AVPP01185 164 aa13.06□□□□□ -0.32
NEK3-206ENST00000611833 SRSF1Q07955 248 aaKnown RBP eCLIP13.06□□□□□ -0.32
NEK3-206ENST00000611833 RHPN1-AS1Q9BWJ2 59 aa13.06□□□□□ -0.32
NEK3-206ENST00000611833 SMPXQ9UHP9 88 aa13.06□□□□□ -0.32
NEK3-206ENST00000611833 RNASE4P34096 147 aaKnown RBP13.05□□□□□ -0.32
NEK3-206ENST00000611833 ASIPP42127 132 aa13.05□□□□□ -0.32
NEK3-206ENST00000611833 HHLA3Q9XRX5 114 aa13.05□□□□□ -0.32
NEK3-206ENST00000611833 SPG11Q96JI7 2443 aa13.05□□□□□ -0.32
NEK3-206ENST00000611833 TRAV8-6A0A0B4J262 113 aa13.05□□□□□ -0.32
NEK3-206ENST00000611833 F6UB75 175 aa13.05□□□□□ -0.32
NEK3-206ENST00000611833 K7EP13 123 aa13.05□□□□□ -0.32
NEK3-206ENST00000611833 SPRY2O43597 315 aa13.05□□□□□ -0.32
NEK3-206ENST00000611833 DPM2O94777 84 aa13.05□□□□□ -0.32
NEK3-206ENST00000611833 TM4SF20Q53R12 229 aa13.05□□□□□ -0.32
NEK3-206ENST00000611833 ADAMTSL5Q6ZMM2 481 aa13.05□□□□□ -0.32
NEK3-206ENST00000611833 PHLDA3Q9Y5J5 127 aa13.05□□□□□ -0.32
NEK3-206ENST00000611833 FLNCQ14315 2725 aa13.04□□□□□ -0.32
NEK3-206ENST00000611833 ANXA2RQ3ZCQ2 193 aa13.04□□□□□ -0.32
NEK3-206ENST00000611833 RNASE8Q8TDE3 154 aaKnown RBP13.04□□□□□ -0.32
NEK3-206ENST00000611833 AP1S3Q96PC3 154 aa13.04□□□□□ -0.32
NEK3-206ENST00000611833 SELENOKQ9Y6D0 94 aa13.04□□□□□ -0.32
NEK3-206ENST00000611833 CACNA1AO00555 2505 aa13.04□□□□□ -0.32
NEK3-206ENST00000611833 TMEM8BA6NDV4 472 aa13.04□□□□□ -0.32
NEK3-206ENST00000611833 CRYBG3Q68DQ2 2970 aa13.03□□□□□ -0.32
NEK3-206ENST00000611833 IGKV2D-26A0A0A0MRZ7 120 aa13.03□□□□□ -0.32
NEK3-206ENST00000611833 GTSCR1Q86UQ5 136 aa13.03□□□□□ -0.32
NEK3-206ENST00000611833 NRGNQ92686 78 aa13.03□□□□□ -0.32
NEK3-206ENST00000611833 DAZ1Q9NQZ3 744 aaKnown RBP13.03□□□□□ -0.32
NEK3-206ENST00000611833 TMEM160Q9NX00 188 aa13.03□□□□□ -0.32
NEK3-206ENST00000611833 IGLV1-40P01703 118 aa13.02□□□□□ -0.32
NEK3-206ENST00000611833 SMIM2Q9BVW6 85 aa13.02□□□□□ -0.32
NEK3-206ENST00000611833 DOPEY1Q5JWR5 2465 aa13.02□□□□□ -0.32
NEK3-206ENST00000611833 IGSF10Q6WRI0 2623 aa13.02□□□□□ -0.32
NEK3-206ENST00000611833 CSMD2Q7Z408 3487 aa13.02□□□□□ -0.32
NEK3-206ENST00000611833 H3BRM9 83 aa13.02□□□□□ -0.33
NEK3-206ENST00000611833 SRD5A1P18405 259 aa13.02□□□□□ -0.33
NEK3-206ENST00000611833 ZC2HC1BQ5TFG8 222 aa13.02□□□□□ -0.33
NEK3-206ENST00000611833 C14orf178Q8N769 122 aaPredicted RBP13.02□□□□□ -0.33
NEK3-206ENST00000611833 FAM19A4Q96LR4 140 aa13.01□□□□□ -0.33
NEK3-206ENST00000611833 DPH3P1Q9H4G8 78 aa13.01□□□□□ -0.33
NEK3-206ENST00000611833 USP9XQ93008 2570 aaPredicted RBP13.01□□□□□ -0.33
NEK3-206ENST00000611833 B4DSR2 109 aa13.01□□□□□ -0.33
NEK3-206ENST00000611833 KIR3DS1Q14943 382 aa13.01□□□□□ -0.33
NEK3-206ENST00000611833 MRPL35Q9NZE8 188 aaKnown RBP13.01□□□□□ -0.33
NEK3-206ENST00000611833 GNRH2O43555 120 aa13□□□□□ -0.33
NEK3-206ENST00000611833 TTTY13Q9BZ97 58 aa13□□□□□ -0.33
NEK3-206ENST00000611833 UTP20O75691 2785 aaKnown RBP13□□□□□ -0.33
NEK3-206ENST00000611833 C9orf118A6NHY6 69 aa13□□□□□ -0.33
NEK3-206ENST00000611833 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13□□□□□ -0.33
NEK3-206ENST00000611833 MGPP08493 103 aa13□□□□□ -0.33
NEK3-206ENST00000611833 SUMO2P61956 95 aaKnown RBP13□□□□□ -0.33
NEK3-206ENST00000611833 CFHR3Q02985 330 aa13□□□□□ -0.33
NEK3-206ENST00000611833 TMEM95Q3KNT9 176 aa12.99□□□□□ -0.33
NEK3-206ENST00000611833 RASL10AQ92737 203 aa12.99□□□□□ -0.33
NEK3-206ENST00000611833 A0A087WX48 190 aa12.99□□□□□ -0.33
NEK3-206ENST00000611833 GAGE10A6NGK3 116 aa12.99□□□□□ -0.33
NEK3-206ENST00000611833 ORMDL2Q53FV1 153 aa12.99□□□□□ -0.33
NEK3-206ENST00000611833 TRBV7-9A0A0J9YWB2 115 aa12.98□□□□□ -0.33
NEK3-206ENST00000611833 H3BUT2 72 aa12.98□□□□□ -0.33
NEK3-206ENST00000611833 MED14OSP0DP75 135 aa12.98□□□□□ -0.33
NEK3-206ENST00000611833 EDN2P20800 178 aa12.98□□□□□ -0.33
NEK3-206ENST00000611833 ID1P41134 155 aa12.98□□□□□ -0.33
NEK3-206ENST00000611833 APRG1Q8IVJ8 170 aa12.98□□□□□ -0.33
NEK3-206ENST00000611833 RAB37Q96AX2 223 aa12.98□□□□□ -0.33
NEK3-206ENST00000611833 RPL39LQ96EH5 51 aaKnown RBP12.98□□□□□ -0.33
NEK3-206ENST00000611833 C20orf78Q9BR46 151 aa12.98□□□□□ -0.33
NEK3-206ENST00000611833 GCSHP23434 173 aa12.97□□□□□ -0.33
NEK3-206ENST00000611833 HIGD1BQ9P298 99 aa12.97□□□□□ -0.33
NEK3-206ENST00000611833 K7EMT4 169 aa12.96□□□□□ -0.33
NEK3-206ENST00000611833 RNASE3P12724 160 aaKnown RBP12.96□□□□□ -0.33
NEK3-206ENST00000611833 SCGB3A1Q96QR1 104 aa12.96□□□□□ -0.33
NEK3-206ENST00000611833 SPOCK3Q9BQ16 436 aa12.96□□□□□ -0.33
NEK3-206ENST00000611833 NAA38Q9BRA0 125 aaKnown RBP12.96□□□□□ -0.33
NEK3-206ENST00000611833 CHAC1Q9BUX1 264 aa12.96□□□□□ -0.33
NEK3-206ENST00000611833 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.96□□□□□ -0.335e-7■■■■□ 23.5
NEK3-206ENST00000611833 PLNP26678 52 aa12.96□□□□□ -0.34
NEK3-206ENST00000611833 GTF2H5Q6ZYL4 71 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms