RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 HERVK_113P63121 156 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 HOXA4Q00056 320 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 EDDM3AQ14507 147 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 PMVKQ15126 192 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 MRGPRG-AS1Q2M3A8 158 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 DEFB133Q30KQ1 61 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 ALKBH6Q3KRA9 238 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 ZNF826PQ6ZT77 177 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 DEFB132Q7Z7B7 95 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 LINC00643Q86TS7 51 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 MDP1Q86V88 176 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 KLF14Q8TD94 323 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 TMEM263Q8WUH6 116 aaKnown RBP3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 ASCL2Q99929 193 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 DNAH12Q6ZR08 3092 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 SRCAPQ6ZRS2 3230 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 TRAV17A0A0B4J275 112 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGHV1OR15-9A0A0B4J2B8 117 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 RBAKDNA6NC62 111 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 ZNF815PA8K554 130 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 C17orf100A8MU93 164 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 E7EUB6 86 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 H3BMM0 161 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 K7ENP7 123 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 K7ESF4 209 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 M0R381 172 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 NDUFA3O95167 84 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 TGFAP01135 160 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGLV2-23P01705 113 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGHV3-13P01766 116 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGHV3-9P01782 118 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGKV1-16P04430 117 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 RPL7P18124 248 aaKnown RBP3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 GLRXP35754 106 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 FXYD7P58549 80 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 HERVK_113P61574 105 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 HIST1H4AP62805 103 aaKnown RBP3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 VMA21Q3ZAQ7 101 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 C9orf153Q5TBE3 101 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 ZNF474Q6S9Z5 364 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 EXOC3-AS1Q8N2X6 119 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 C1orf162Q8NEQ5 155 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 UBE2WQ96B02 151 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 C2orf48Q96LS8 159 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 RNF5Q99942 180 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 FAM173AQ9BQD7 235 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 CHCHD5Q9BSY4 110 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 OBP2BQ9NPH6 170 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 PRR14LQ5THK1 2151 aa3.09□□□□□ -1.91
HMGB1P50-201ENST00000605814 ZGRF1Q86YA3 2104 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 SDHAF1A6NFY7 115 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 C11orf86A6NJI1 115 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 NDUFC2-KCTD14E9PQ53 114 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 SMKR1H3BMG3 65 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 H3BVH4 76 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 I3L2K1 104 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGKV3-15P01624 115 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGLV1-44P01699 117 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 ORM1P02763 201 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 CD59P13987 128 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 CRIP2P52943 208 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 DLX6P56179 175 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 TMEM258P61165 79 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 C3orf36Q3SXR2 165 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 GAGE2AQ6NT46 116 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 SCGB1D4Q6XE38 83 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 SLC25A45Q8N413 288 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 ZNF491Q8N8L2 437 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGFBPL1Q8WX77 278 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 DPH3Q96FX2 82 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 TMEM141Q96I45 108 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 DUX5Q96PT3 197 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 SCGB3A1Q96QR1 104 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 AMELXQ99217 191 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 SLC50A1Q9BRV3 221 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 SMIM2Q9BVW6 85 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 PLXNB1O43157 2135 aa3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 PRRC2AP48634 2157 aaKnown RBP3.08□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGHV4OR15-8A0A075B7B6 117 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 A0A087WW49 117 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGHV5-10-1A0A0J9YXX1 117 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 EPM2AB3EWF7 344 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 F5H768 121 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 H7C423 109 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 ATOX1O00244 68 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 OVOL1O14753 267 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 SCGB2A1O75556 95 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 PLAUP00749 431 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGKV1-17P01599 117 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 COX6CP09669 75 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 CNTFRP26992 372 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 RPL27AP46776 148 aaKnown RBP3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 EFNA4P52798 201 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 EMP1P54849 157 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 MFAP4P55083 255 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 ZNF56Q15929 161 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 GUSBP11Q6P575 273 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 C2orf82Q6UX34 121 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 TRPT1Q86TN4 253 aaKnown RBP3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 FAM216BQ8N7L0 139 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms