RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 TRAV9-1A0A075B6T8 112 aa9.91□□□□□ -0.82
IRF3-225ENST00000600022 K7EQG2 157 aa9.91□□□□□ -0.82
IRF3-225ENST00000600022 DEFB131AP59861 70 aa9.91□□□□□ -0.82
IRF3-225ENST00000600022 ELOBQ15370 118 aa9.91□□□□□ -0.82
IRF3-225ENST00000600022 SMUG1Q53HV7 270 aa9.91□□□□□ -0.82
IRF3-225ENST00000600022 OR4B1Q8NGF8 309 aa9.91□□□□□ -0.82
IRF3-225ENST00000600022 LINC00477Q96M19 166 aa9.91□□□□□ -0.82
IRF3-225ENST00000600022 AGRNO00468 2067 aa9.91□□□□□ -0.82
IRF3-225ENST00000600022 DYNC1H1Q14204 4646 aaKnown RBP9.91□□□□□ -0.82
IRF3-225ENST00000600022 A0A1W2PPQ1 181 aa9.9□□□□□ -0.82
IRF3-225ENST00000600022 XKRY2A2RUG3 117 aa9.9□□□□□ -0.82
IRF3-225ENST00000600022 COLCA2A8K830 154 aa9.9□□□□□ -0.82
IRF3-225ENST00000600022 RAB5AP20339 215 aa9.9□□□□□ -0.82
IRF3-225ENST00000600022 FAM162BQ5T6X4 162 aa9.9□□□□□ -0.82
IRF3-225ENST00000600022 C9orf47Q6ZRZ4 202 aa9.9□□□□□ -0.82
IRF3-225ENST00000600022 Q8NAQ8 132 aa9.9□□□□□ -0.82
IRF3-225ENST00000600022 VGLL1Q99990 258 aa9.9□□□□□ -0.82
IRF3-225ENST00000600022 RPP21Q9H633 154 aaKnown RBP9.9□□□□□ -0.82
IRF3-225ENST00000600022 PPP1R14DQ9NXH3 145 aa9.9□□□□□ -0.82
IRF3-225ENST00000600022 TMA7Q9Y2S6 64 aaKnown RBP9.9□□□□□ -0.82
IRF3-225ENST00000600022 LENEPQ9Y5L5 61 aa9.9□□□□□ -0.82
IRF3-225ENST00000600022 TRBV24-1A0A075B6N3 115 aa9.89□□□□□ -0.83
IRF3-225ENST00000600022 A8MWL6 223 aa9.89□□□□□ -0.83
IRF3-225ENST00000600022 HIST1H1AQ02539 215 aaPredicted RBP9.89□□□□□ -0.83
IRF3-225ENST00000600022 CT83Q5H943 113 aa9.89□□□□□ -0.83
IRF3-225ENST00000600022 EBLN2Q6P2I7 272 aa9.89□□□□□ -0.83
IRF3-225ENST00000600022 NUDT10Q8NFP7 164 aa9.89□□□□□ -0.83
IRF3-225ENST00000600022 NUDT11Q96G61 164 aa9.89□□□□□ -0.83
IRF3-225ENST00000600022 ZC2HC1AQ96GY0 325 aa9.89□□□□□ -0.83
IRF3-225ENST00000600022 FAM210BQ96KR6 192 aa9.89□□□□□ -0.83
IRF3-225ENST00000600022 C20orf173Q96LM9 149 aa9.89□□□□□ -0.83
IRF3-225ENST00000600022 V9GYV3 84 aa9.89□□□□□ -0.83
IRF3-225ENST00000600022 IGHV4-28A0A0C4DH34 117 aa9.88□□□□□ -0.83
IRF3-225ENST00000600022 PRAC2D3DTV9 90 aa9.88□□□□□ -0.83
IRF3-225ENST00000600022 DUSP14O95147 198 aaKnown RBP9.88□□□□□ -0.83
IRF3-225ENST00000600022 PFN1P07737 140 aaKnown RBP9.88□□□□□ -0.83
IRF3-225ENST00000600022 ZNF688P0C7X2 276 aa9.88□□□□□ -0.83
IRF3-225ENST00000600022 CMC4P56277 68 aaPredicted RBP9.88□□□□□ -0.83
IRF3-225ENST00000600022 ERCC8Q13216 396 aa9.88□□□□□ -0.83
IRF3-225ENST00000600022 PSMG4Q5JS54 123 aa9.88□□□□□ -0.83
IRF3-225ENST00000600022 COX8CQ7Z4L0 72 aa9.88□□□□□ -0.83
IRF3-225ENST00000600022 OR8A1Q8NGG7 326 aa9.88□□□□□ -0.83
IRF3-225ENST00000600022 Q8TAT8 98 aa9.88□□□□□ -0.83
IRF3-225ENST00000600022 AGPAT4-IT1Q9H0P7 198 aa9.88□□□□□ -0.83
IRF3-225ENST00000600022 TGIF2-C20orf24A0A0A6YYL0 155 aa9.87□□□□□ -0.83
IRF3-225ENST00000600022 TRBV7-9A0A0J9YWB2 115 aa9.87□□□□□ -0.83
IRF3-225ENST00000600022 KNCNA6PVL3 124 aa9.87□□□□□ -0.83
IRF3-225ENST00000600022 C1orf196B1AJZ1 125 aa9.87□□□□□ -0.83
IRF3-225ENST00000600022 NPIPB6E9PJ23 425 aa9.87□□□□□ -0.83
IRF3-225ENST00000600022 RPS10P46783 165 aaKnown RBP9.87□□□□□ -0.83
IRF3-225ENST00000600022 RPS20P60866 119 aaKnown RBP9.87□□□□□ -0.83
IRF3-225ENST00000600022 Q6ZTC4 211 aa9.87□□□□□ -0.83
IRF3-225ENST00000600022 TSKUQ8WUA8 353 aa9.87□□□□□ -0.83
IRF3-225ENST00000600022 X6R8D5 127 aa9.87□□□□□ -0.83
IRF3-225ENST00000600022 A0A1B0GVY2 172 aa9.86□□□□□ -0.83
IRF3-225ENST00000600022 C19orf71A6NCJ1 209 aa9.86□□□□□ -0.83
IRF3-225ENST00000600022 FABP5P3A8MUU1 101 aa9.86□□□□□ -0.83
IRF3-225ENST00000600022 FAM3BP58499 235 aaPredicted RBP9.86□□□□□ -0.83
IRF3-225ENST00000600022 RAB5BP61020 215 aa9.86□□□□□ -0.83
IRF3-225ENST00000600022 COX19Q49B96 90 aa9.86□□□□□ -0.83
IRF3-225ENST00000600022 OR2D3Q8NGH3 330 aa9.86□□□□□ -0.83
IRF3-225ENST00000600022 C8orf49Q96NF6 230 aa9.86□□□□□ -0.83
IRF3-225ENST00000600022 YPEL4Q96NS1 127 aa9.86□□□□□ -0.83
IRF3-225ENST00000600022 GFRA4Q9GZZ7 299 aa9.86□□□□□ -0.83
IRF3-225ENST00000600022 NAT8BQ9UHF3 227 aa9.86□□□□□ -0.83
IRF3-225ENST00000600022 DNAH11Q96DT5 4516 aa9.85□□□□□ -0.83
IRF3-225ENST00000600022 SMIM27A0A1W2PRY6 76 aa9.85□□□□□ -0.83
IRF3-225ENST00000600022 TMEM189A5PLL7 270 aa9.85□□□□□ -0.83
IRF3-225ENST00000600022 FAM231BA6NCW3 169 aa9.85□□□□□ -0.83
IRF3-225ENST00000600022 CXCL1P09341 107 aa9.85□□□□□ -0.83
IRF3-225ENST00000600022 PRB4P10163 310 aaPredicted RBP9.85□□□□□ -0.83
IRF3-225ENST00000600022 Q6AWC8 147 aa9.85□□□□□ -0.83
IRF3-225ENST00000600022 TRPT1Q86TN4 253 aaKnown RBP9.85□□□□□ -0.83
IRF3-225ENST00000600022 BORCS7Q96B45 105 aa9.85□□□□□ -0.83
IRF3-225ENST00000600022 PYGO2Q9BRQ0 406 aa9.85□□□□□ -0.83
IRF3-225ENST00000600022 SAV1Q9H4B6 383 aaPredicted RBP9.85□□□□□ -0.83
IRF3-225ENST00000600022 CELA1Q9UNI1 258 aa9.85□□□□□ -0.83
IRF3-225ENST00000600022 ABCA13Q86UQ4 5058 aa9.85□□□□□ -0.83
IRF3-225ENST00000600022 IGHV4-4A0A075B6R2 117 aa9.84□□□□□ -0.83
IRF3-225ENST00000600022 SH2D1AO60880 128 aa9.84□□□□□ -0.83
IRF3-225ENST00000600022 TSPOP30536 169 aa9.84□□□□□ -0.83
IRF3-225ENST00000600022 LEPP41159 167 aa9.84□□□□□ -0.83
IRF3-225ENST00000600022 TCL1AP56279 114 aa9.84□□□□□ -0.83
IRF3-225ENST00000600022 FOXI2Q6ZQN5 318 aa9.84□□□□□ -0.83
IRF3-225ENST00000600022 STHQ8IWL8 128 aa9.84□□□□□ -0.83
IRF3-225ENST00000600022 CSNK1G2-AS1Q8NCQ2 148 aa9.84□□□□□ -0.83
IRF3-225ENST00000600022 M0R2N4 97 aa9.83□□□□□ -0.84
IRF3-225ENST00000600022 ORM1P02763 201 aa9.83□□□□□ -0.84
IRF3-225ENST00000600022 TYMSP04818 313 aa9.83□□□□□ -0.84
IRF3-225ENST00000600022 GPX1P07203 203 aa9.83□□□□□ -0.84
IRF3-225ENST00000600022 TCTAP57738 103 aa9.83□□□□□ -0.84
IRF3-225ENST00000600022 WDR73Q6P4I2 378 aa9.83□□□□□ -0.84
IRF3-225ENST00000600022 ODF3Q96PU9 254 aa9.83□□□□□ -0.84
IRF3-225ENST00000600022 A0A0J9YX75 114 aa9.82□□□□□ -0.84
IRF3-225ENST00000600022 HIGD1CA8MV81 97 aa9.82□□□□□ -0.84
IRF3-225ENST00000600022 RTL8CO15255 209 aa9.82□□□□□ -0.84
IRF3-225ENST00000600022 ZNF705DP0CH99 300 aaPredicted RBP9.82□□□□□ -0.84
IRF3-225ENST00000600022 ZNF705BP0CI00 300 aaPredicted RBP9.82□□□□□ -0.84
IRF3-225ENST00000600022 C12orf74Q32Q52 190 aa9.82□□□□□ -0.84
IRF3-225ENST00000600022 ACTL10Q5JWF8 245 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms