RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 SPANXN1Q5VSR9 72 aa17.17■□□□□ 0.34
SRRM1-222ENST00000596378 LINC00477Q96M19 166 aa17.17■□□□□ 0.34
SRRM1-222ENST00000596378 C18orf15Q96N68 181 aa17.17■□□□□ 0.34
SRRM1-222ENST00000596378 GOLT1BQ9Y3E0 138 aa17.17■□□□□ 0.34
SRRM1-222ENST00000596378 MXRA5Q9NR99 2828 aa17.17■□□□□ 0.34
SRRM1-222ENST00000596378 OVOL1O14753 267 aa17.16■□□□□ 0.34
SRRM1-222ENST00000596378 TCTAP57738 103 aa17.16■□□□□ 0.34
SRRM1-222ENST00000596378 PEF1Q9UBV8 284 aaKnown RBP17.16■□□□□ 0.34
SRRM1-222ENST00000596378 DOPEY2Q9Y3R5 2298 aa17.16■□□□□ 0.34
SRRM1-222ENST00000596378 COX6B1P14854 86 aa17.15■□□□□ 0.34
SRRM1-222ENST00000596378 IFI27L1Q96BM0 104 aa17.15■□□□□ 0.34
SRRM1-222ENST00000596378 LENEPQ9Y5L5 61 aa17.15■□□□□ 0.34
SRRM1-222ENST00000596378 DLEU1O43261 78 aa17.15■□□□□ 0.34
SRRM1-222ENST00000596378 SNAI2O43623 268 aa17.15■□□□□ 0.34
SRRM1-222ENST00000596378 PSMB8P28062 276 aa17.15■□□□□ 0.34
SRRM1-222ENST00000596378 LEPP41159 167 aa17.15■□□□□ 0.34
SRRM1-222ENST00000596378 PTPN13Q12923 2485 aa17.15■□□□□ 0.34
SRRM1-222ENST00000596378 NPSP0C0P6 89 aa17.14■□□□□ 0.33
SRRM1-222ENST00000596378 MPV17L2Q567V2 206 aa17.14■□□□□ 0.33
SRRM1-222ENST00000596378 MS4A6AQ9H2W1 248 aa17.14■□□□□ 0.33
SRRM1-222ENST00000596378 SMPXQ9UHP9 88 aa17.14■□□□□ 0.33
SRRM1-222ENST00000596378 ABCA12Q86UK0 2595 aa17.14■□□□□ 0.33
SRRM1-222ENST00000596378 RNF223E7ERA6 249 aa17.14■□□□□ 0.33
SRRM1-222ENST00000596378 RNASE4P34096 147 aaKnown RBP17.14■□□□□ 0.33
SRRM1-222ENST00000596378 KRTAP10-9P60411 292 aa17.14■□□□□ 0.33
SRRM1-222ENST00000596378 ANKRD39Q53RE8 183 aa17.13■□□□□ 0.33
SRRM1-222ENST00000596378 OR2K2Q8NGT1 345 aa17.13■□□□□ 0.33
SRRM1-222ENST00000596378 SMIM15Q7Z3B0 74 aa17.13■□□□□ 0.33
SRRM1-222ENST00000596378 LGALS9BQ3B8N2 356 aa17.12■□□□□ 0.33
SRRM1-222ENST00000596378 LGALS9CQ6DKI2 356 aa17.12■□□□□ 0.33
SRRM1-222ENST00000596378 TRAV21A0A0B4J279 112 aa17.12■□□□□ 0.33
SRRM1-222ENST00000596378 M0R381 172 aa17.12■□□□□ 0.33
SRRM1-222ENST00000596378 ANXA2RQ3ZCQ2 193 aa17.12■□□□□ 0.33
SRRM1-222ENST00000596378 NRACQ8N912 160 aa17.12■□□□□ 0.33
SRRM1-222ENST00000596378 NXT2Q9NPJ8 142 aaKnown RBP17.12■□□□□ 0.33
SRRM1-222ENST00000596378 IGHV4-4A0A075B6R2 117 aa17.11■□□□□ 0.33
SRRM1-222ENST00000596378 LINC01546A6NGU7 62 aa17.11■□□□□ 0.33
SRRM1-222ENST00000596378 WFDC12Q8WWY7 111 aa17.11■□□□□ 0.33
SRRM1-222ENST00000596378 FAM19A4Q96LR4 140 aa17.11■□□□□ 0.33
SRRM1-222ENST00000596378 DKK2Q9UBU2 259 aa17.1■□□□□ 0.33
SRRM1-222ENST00000596378 IGLV2-18A0A075B6J9 118 aa17.1■□□□□ 0.33
SRRM1-222ENST00000596378 NUDT3O95989 172 aa17.1■□□□□ 0.33
SRRM1-222ENST00000596378 FCER1GP30273 86 aa17.09■□□□□ 0.33
SRRM1-222ENST00000596378 GNRH2O43555 120 aa17.09■□□□□ 0.33
SRRM1-222ENST00000596378 COX8AP10176 69 aa17.09■□□□□ 0.33
SRRM1-222ENST00000596378 S100A4P26447 101 aaKnown RBP17.09■□□□□ 0.33
SRRM1-222ENST00000596378 ZNF843Q8N446 348 aa17.09■□□□□ 0.33
SRRM1-222ENST00000596378 Q8N8P6 123 aa17.09■□□□□ 0.33
SRRM1-222ENST00000596378 TMEM158Q8WZ71 300 aa17.09■□□□□ 0.33
SRRM1-222ENST00000596378 CR1P17927 2039 aa17.08■□□□□ 0.32
SRRM1-222ENST00000596378 TEX15Q9BXT5 2789 aa17.07■□□□□ 0.32
SRRM1-222ENST00000596378 DCANP1Q8TF63 244 aa17.07■□□□□ 0.32
SRRM1-222ENST00000596378 J3QLI3 93 aa17.07■□□□□ 0.32
SRRM1-222ENST00000596378 K7EMT4 169 aa17.07■□□□□ 0.32
SRRM1-222ENST00000596378 ASIPP42127 132 aa17.07■□□□□ 0.32
SRRM1-222ENST00000596378 GAGE1Q13065 139 aa17.07■□□□□ 0.32
SRRM1-222ENST00000596378 ZNF580Q9UK33 172 aa17.07■□□□□ 0.32
SRRM1-222ENST00000596378 C2orf91Q6ZV80 131 aa17.06■□□□□ 0.32
SRRM1-222ENST00000596378 ZNF469Q96JG9 3925 aaPredicted RBP17.06■□□□□ 0.32
SRRM1-222ENST00000596378 BVES-AS1Q5T3Y7 98 aa17.05■□□□□ 0.32
SRRM1-222ENST00000596378 NAV2Q8IVL1 2488 aa17.05■□□□□ 0.32
SRRM1-222ENST00000596378 IGHV4-31P0DP07 118 aa17.05■□□□□ 0.32
SRRM1-222ENST00000596378 C14orf178Q8N769 122 aaPredicted RBP17.05■□□□□ 0.32
SRRM1-222ENST00000596378 PHLDA3Q9Y5J5 127 aa17.05■□□□□ 0.32
SRRM1-222ENST00000596378 CD5LO43866 347 aa17.04■□□□□ 0.32
SRRM1-222ENST00000596378 FGF6P10767 208 aa17.04■□□□□ 0.32
SRRM1-222ENST00000596378 VPREB3Q9UKI3 123 aa17.04■□□□□ 0.32
SRRM1-222ENST00000596378 EPG5Q9HCE0 2579 aa17.04■□□□□ 0.32
SRRM1-222ENST00000596378 APRG1Q8IVJ8 170 aa17.04■□□□□ 0.32
SRRM1-222ENST00000596378 BEX4Q9NWD9 120 aaPredicted RBP17.04■□□□□ 0.32
SRRM1-222ENST00000596378 RNASE3P12724 160 aaKnown RBP17.03■□□□□ 0.32
SRRM1-222ENST00000596378 DUX5Q96PT3 197 aa17.03■□□□□ 0.32
SRRM1-222ENST00000596378 ZNF688P0C7X2 276 aa17.03■□□□□ 0.32
SRRM1-222ENST00000596378 COX11Q9Y6N1 276 aa17.03■□□□□ 0.32
SRRM1-222ENST00000596378 PRSS1P07477 247 aa17.02■□□□□ 0.32
SRRM1-222ENST00000596378 ERASQ7Z444 233 aa17.02■□□□□ 0.32
SRRM1-222ENST00000596378 MUC4Q99102 2169 aa17.02■□□□□ 0.31
SRRM1-222ENST00000596378 NBPF19A0A087WUL8 3843 aa17.02■□□□□ 0.31
SRRM1-222ENST00000596378 SMIM17P0DL12 118 aa17.02■□□□□ 0.31
SRRM1-222ENST00000596378 ID1P41134 155 aa17.02■□□□□ 0.31
SRRM1-222ENST00000596378 SYNJ2BPP57105 145 aa17.02■□□□□ 0.31
SRRM1-222ENST00000596378 HOXA3O43365 443 aaPredicted RBP17.01■□□□□ 0.31
SRRM1-222ENST00000596378 LAGE3Q14657 143 aa17.01■□□□□ 0.31
SRRM1-222ENST00000596378 ODF1Q14990 250 aa17.01■□□□□ 0.31
SRRM1-222ENST00000596378 FSHBP01225 129 aa17.01■□□□□ 0.31
SRRM1-222ENST00000596378 ZNF124Q15973 351 aa17.01■□□□□ 0.31
SRRM1-222ENST00000596378 PSMG4Q5JS54 123 aa17.01■□□□□ 0.31
SRRM1-222ENST00000596378 Q6YL49 198 aa17.01■□□□□ 0.31
SRRM1-222ENST00000596378 RPL39LQ96EH5 51 aaKnown RBP17.01■□□□□ 0.31
SRRM1-222ENST00000596378 MRAP2Q96G30 205 aa17.01■□□□□ 0.31
SRRM1-222ENST00000596378 FOXC2Q99958 501 aa17.01■□□□□ 0.31
SRRM1-222ENST00000596378 ZNF702PQ9H963 129 aa17.01■□□□□ 0.31
SRRM1-222ENST00000596378 PRSS47A8MTI9 375 aa17■□□□□ 0.31
SRRM1-222ENST00000596378 KLLNB2CW77 178 aa17■□□□□ 0.31
SRRM1-222ENST00000596378 IGKV3-20P01619 116 aa17■□□□□ 0.31
SRRM1-222ENST00000596378 MGPP08493 103 aa17■□□□□ 0.31
SRRM1-222ENST00000596378 DPF1Q92782 380 aa17■□□□□ 0.31
SRRM1-222ENST00000596378 IGHV4OR15-8A0A075B7B6 117 aa16.99■□□□□ 0.31
SRRM1-222ENST00000596378 A0A087WW49 117 aa16.99■□□□□ 0.31
SRRM1-222ENST00000596378 NMUP48645 174 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 570.7 ms