RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 PGPA6NDG6 321 aa10.63□□□□□ -0.71
GTF2F1-203ENST00000594213 EIF3GO75821 320 aaKnown RBP eCLIP10.63□□□□□ -0.71
GTF2F1-203ENST00000594213 TYMSP04818 313 aa10.63□□□□□ -0.71
GTF2F1-203ENST00000594213 H2BFSP57053 126 aa10.63□□□□□ -0.71
GTF2F1-203ENST00000594213 HAMPP81172 84 aa10.63□□□□□ -0.71
GTF2F1-203ENST00000594213 CYCSP99999 105 aaKnown RBP10.63□□□□□ -0.71
GTF2F1-203ENST00000594213 KHDC3LQ587J8 217 aa10.63□□□□□ -0.71
GTF2F1-203ENST00000594213 LINC00299Q6ZSB3 139 aa10.63□□□□□ -0.71
GTF2F1-203ENST00000594213 HYLS1Q96M11 299 aa10.63□□□□□ -0.71
GTF2F1-203ENST00000594213 NAGKQ9UJ70 344 aa10.63□□□□□ -0.71
GTF2F1-203ENST00000594213 IGLV5-52A0A0A0MRZ9 124 aa10.62□□□□□ -0.71
GTF2F1-203ENST00000594213 TRAV21A0A0B4J279 112 aa10.62□□□□□ -0.71
GTF2F1-203ENST00000594213 TAS2R45P59539 299 aa10.62□□□□□ -0.71
GTF2F1-203ENST00000594213 PPP1R1CQ8WVI7 109 aa10.62□□□□□ -0.71
GTF2F1-203ENST00000594213 FAM30AQ9NZY2 134 aa10.62□□□□□ -0.71
GTF2F1-203ENST00000594213 MBD2Q9UBB5 411 aa10.62□□□□□ -0.71
GTF2F1-203ENST00000594213 HSPB11Q9Y547 144 aa10.62□□□□□ -0.71
GTF2F1-203ENST00000594213 TRAV8-1A0A0A6YYK1 113 aa10.61□□□□□ -0.71
GTF2F1-203ENST00000594213 FAM229AH3BQW9 127 aa10.61□□□□□ -0.71
GTF2F1-203ENST00000594213 DPPA3Q6W0C5 159 aa10.61□□□□□ -0.71
GTF2F1-203ENST00000594213 GOLT1AQ6ZVE7 132 aa10.61□□□□□ -0.71
GTF2F1-203ENST00000594213 F6UZH7 168 aa10.6□□□□□ -0.71
GTF2F1-203ENST00000594213 RS1O15537 224 aa10.6□□□□□ -0.71
GTF2F1-203ENST00000594213 PFN1P07737 140 aaKnown RBP10.6□□□□□ -0.71
GTF2F1-203ENST00000594213 Q8N814 137 aa10.6□□□□□ -0.71
GTF2F1-203ENST00000594213 SLC25A29Q8N8R3 303 aa10.6□□□□□ -0.71
GTF2F1-203ENST00000594213 NHLRC2Q8NBF2 726 aa10.6□□□□□ -0.71
GTF2F1-203ENST00000594213 CMTM2Q8TAZ6 248 aa10.6□□□□□ -0.71
GTF2F1-203ENST00000594213 WFDC1Q9HC57 220 aa10.6□□□□□ -0.71
GTF2F1-203ENST00000594213 TREM1Q9NP99 234 aa10.6□□□□□ -0.71
GTF2F1-203ENST00000594213 C11orf21Q9P2W6 132 aa10.6□□□□□ -0.71
GTF2F1-203ENST00000594213 PSCAO43653 123 aa10.59□□□□□ -0.71
GTF2F1-203ENST00000594213 MPC2O95563 127 aa10.59□□□□□ -0.71
GTF2F1-203ENST00000594213 PPT1P50897 306 aa10.59□□□□□ -0.71
GTF2F1-203ENST00000594213 IFITM3Q01628 133 aa10.59□□□□□ -0.71
GTF2F1-203ENST00000594213 CFAP126Q5VTH2 177 aa10.59□□□□□ -0.71
GTF2F1-203ENST00000594213 PQLC2Q6ZP29 291 aa10.59□□□□□ -0.71
GTF2F1-203ENST00000594213 Q6ZSN1 163 aa10.59□□□□□ -0.71
GTF2F1-203ENST00000594213 KCNS1Q96KK3 526 aa10.59□□□□□ -0.71
GTF2F1-203ENST00000594213 SDF2L1Q9HCN8 221 aa10.59□□□□□ -0.71
GTF2F1-203ENST00000594213 BOLA1Q9Y3E2 137 aa10.59□□□□□ -0.71
GTF2F1-203ENST00000594213 TRBV6-4A0A1B0GX49 114 aa10.58□□□□□ -0.72
GTF2F1-203ENST00000594213 FBLL1A6NHQ2 334 aaKnown RBP10.58□□□□□ -0.72
GTF2F1-203ENST00000594213 CIDEAO60543 219 aa10.58□□□□□ -0.72
GTF2F1-203ENST00000594213 C1QBP02746 253 aa10.58□□□□□ -0.72
GTF2F1-203ENST00000594213 RPL12P30050 165 aaKnown RBP10.58□□□□□ -0.72
GTF2F1-203ENST00000594213 FAM74A1Q5RGS3 127 aa10.58□□□□□ -0.72
GTF2F1-203ENST00000594213 LELP1Q5T871 98 aa10.58□□□□□ -0.72
GTF2F1-203ENST00000594213 ENKURQ8TC29 256 aa10.58□□□□□ -0.72
GTF2F1-203ENST00000594213 SCGB1C1Q8TD33 95 aa10.58□□□□□ -0.72
GTF2F1-203ENST00000594213 ASB13Q8WXK3 278 aa10.58□□□□□ -0.72
GTF2F1-203ENST00000594213 PTH2Q96A98 100 aa10.58□□□□□ -0.72
GTF2F1-203ENST00000594213 SMIM3Q9BZL3 60 aa10.58□□□□□ -0.72
GTF2F1-203ENST00000594213 RPH3ALQ9UNE2 315 aa10.58□□□□□ -0.72
GTF2F1-203ENST00000594213 TRAV8-6A0A0B4J262 113 aa10.57□□□□□ -0.72
GTF2F1-203ENST00000594213 INMT-MINDY4F8WBC2 141 aa10.57□□□□□ -0.72
GTF2F1-203ENST00000594213 UPK1BO75841 260 aa10.57□□□□□ -0.72
GTF2F1-203ENST00000594213 ZNF80P51504 273 aaPredicted RBP10.57□□□□□ -0.72
GTF2F1-203ENST00000594213 GNG5P63218 68 aa10.57□□□□□ -0.72
GTF2F1-203ENST00000594213 ZNF876PQ49A33 203 aa10.57□□□□□ -0.72
GTF2F1-203ENST00000594213 S100ZQ8WXG8 99 aa10.57□□□□□ -0.72
GTF2F1-203ENST00000594213 C9orf85Q96MD7 179 aa10.57□□□□□ -0.72
GTF2F1-203ENST00000594213 PRADC1Q9BSG0 188 aa10.57□□□□□ -0.72
GTF2F1-203ENST00000594213 Q9HAA7 133 aa10.57□□□□□ -0.72
GTF2F1-203ENST00000594213 RAB2AP61019 212 aa10.56□□□□□ -0.72
GTF2F1-203ENST00000594213 WFDC2Q14508 124 aa10.56□□□□□ -0.72
GTF2F1-203ENST00000594213 RHOHQ15669 191 aa10.56□□□□□ -0.72
GTF2F1-203ENST00000594213 ACOT6Q3I5F7 207 aaPredicted RBP10.56□□□□□ -0.72
GTF2F1-203ENST00000594213 OR10J3Q5JRS4 329 aa10.56□□□□□ -0.72
GTF2F1-203ENST00000594213 MARVELD1Q9BSK0 173 aa10.56□□□□□ -0.72
GTF2F1-203ENST00000594213 IGHV3-30P01768 117 aa10.55□□□□□ -0.72
GTF2F1-203ENST00000594213 IGHV3-33P01772 117 aa10.55□□□□□ -0.72
GTF2F1-203ENST00000594213 IGHV3-30-3P0DP02 117 aa10.55□□□□□ -0.72
GTF2F1-203ENST00000594213 IGHV3-30-5P0DP03 117 aa10.55□□□□□ -0.72
GTF2F1-203ENST00000594213 LAGE3Q14657 143 aa10.55□□□□□ -0.72
GTF2F1-203ENST00000594213 Q6ZSA8 131 aa10.55□□□□□ -0.72
GTF2F1-203ENST00000594213 SUN5Q8TC36 379 aa10.55□□□□□ -0.72
GTF2F1-203ENST00000594213 SGK494Q96LW2 274 aa10.55□□□□□ -0.72
GTF2F1-203ENST00000594213 GTSF1LQ9H1H1 148 aa10.55□□□□□ -0.72
GTF2F1-203ENST00000594213 IGHV3-73A0A0B4J1V6 119 aa10.54□□□□□ -0.72
GTF2F1-203ENST00000594213 SERTM2A0A1B0GWG4 89 aa10.54□□□□□ -0.72
GTF2F1-203ENST00000594213 A0A1W2PPV4 95 aa10.54□□□□□ -0.72
GTF2F1-203ENST00000594213 PGPEP1LA6NFU8 196 aa10.54□□□□□ -0.72
GTF2F1-203ENST00000594213 IGLV2-11P01706 119 aa10.54□□□□□ -0.72
GTF2F1-203ENST00000594213 ATP6V0E2Q8NHE4 81 aa10.54□□□□□ -0.72
GTF2F1-203ENST00000594213 TAAR5O14804 337 aa10.53□□□□□ -0.72
GTF2F1-203ENST00000594213 HMGB3O15347 200 aaKnown RBP10.53□□□□□ -0.72
GTF2F1-203ENST00000594213 PET100P0DJ07 73 aa10.53□□□□□ -0.72
GTF2F1-203ENST00000594213 LINC00694P0DN24 101 aa10.53□□□□□ -0.72
GTF2F1-203ENST00000594213 RNASE3P12724 160 aaKnown RBP10.53□□□□□ -0.72
GTF2F1-203ENST00000594213 ZNF506Q5JVG8 444 aa10.53□□□□□ -0.72
GTF2F1-203ENST00000594213 Q8N3U1 123 aa10.53□□□□□ -0.72
GTF2F1-203ENST00000594213 OR10G9Q8NGN4 311 aa10.53□□□□□ -0.72
GTF2F1-203ENST00000594213 OR10G7Q8NGN6 311 aa10.53□□□□□ -0.72
GTF2F1-203ENST00000594213 LRP1Q07954 4544 aaKnown RBP10.53□□□□□ -0.72
GTF2F1-203ENST00000594213 TCRAP04437 139 aa10.52□□□□□ -0.73
GTF2F1-203ENST00000594213 STAG3L2P0CL84 134 aa10.52□□□□□ -0.73
GTF2F1-203ENST00000594213 STAG3L3P0CL85 134 aa10.52□□□□□ -0.73
GTF2F1-203ENST00000594213 ARL14EPLP0DKL9 152 aa10.52□□□□□ -0.73
GTF2F1-203ENST00000594213 MGST1P10620 155 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms