RNA–Protein interactions for RNA: ENST00000593101.5

PRKCSH-219, Transcript of protein kinase C substrate 80K-H, human

TSL 4

Gene PRKCSH, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-219	ENST00000593101	ERVFC1-1	P60608	527 aa		11.24	□□□□□ -0.61
PRKCSH-219	ENST00000593101	NUDT10	Q8NFP7	164 aa		11.24	□□□□□ -0.61
PRKCSH-219	ENST00000593101	NUDT11	Q96G61	164 aa		11.24	□□□□□ -0.61
PRKCSH-219	ENST00000593101	C11orf21	Q9P2W6	132 aa		11.24	□□□□□ -0.61
PRKCSH-219	ENST00000593101		X6R8D5	127 aa		11.24	□□□□□ -0.61
PRKCSH-219	ENST00000593101	C19orf71	A6NCJ1	209 aa		11.23	□□□□□ -0.61
PRKCSH-219	ENST00000593101	GNRH2	O43555	120 aa		11.23	□□□□□ -0.61
PRKCSH-219	ENST00000593101	ADCYAP1	P18509	176 aa		11.23	□□□□□ -0.61
PRKCSH-219	ENST00000593101	AZU1	P20160	251 aa		11.23	□□□□□ -0.61
PRKCSH-219	ENST00000593101	TDRG1	Q3Y452	100 aa		11.23	□□□□□ -0.61
PRKCSH-219	ENST00000593101	IBA57	Q5T440	356 aa	Known RBP	11.23	□□□□□ -0.61
PRKCSH-219	ENST00000593101	ISOC2	Q96AB3	205 aa		11.23	□□□□□ -0.61
PRKCSH-219	ENST00000593101	RNASE7	Q9H1E1	156 aa	Known RBP	11.23	□□□□□ -0.61
PRKCSH-219	ENST00000593101	TP53TG3	Q9ULZ0	132 aa		11.23	□□□□□ -0.61
PRKCSH-219	ENST00000593101	TRGV11	A0A075B6L2	103 aa		11.22	□□□□□ -0.61
PRKCSH-219	ENST00000593101	TMSB15B	A0A087X1C1	80 aa		11.22	□□□□□ -0.61
PRKCSH-219	ENST00000593101	IGKV3D-20	A0A0C4DH25	116 aa		11.22	□□□□□ -0.61
PRKCSH-219	ENST00000593101	KRBOX1	C9JBD0	128 aa		11.22	□□□□□ -0.61
PRKCSH-219	ENST00000593101	GATC	O43716	136 aa	Known RBP	11.22	□□□□□ -0.61
PRKCSH-219	ENST00000593101	MIF	P14174	115 aa		11.22	□□□□□ -0.61
PRKCSH-219	ENST00000593101	PNRC1	Q12796	327 aa	Predicted RBP	11.22	□□□□□ -0.61
PRKCSH-219	ENST00000593101	LINC01559	Q495D7	138 aa		11.22	□□□□□ -0.61
PRKCSH-219	ENST00000593101	C10orf91	Q5T1B1	145 aa		11.22	□□□□□ -0.61
PRKCSH-219	ENST00000593101	C15orf54	Q8N8G6	183 aa		11.22	□□□□□ -0.61
PRKCSH-219	ENST00000593101	OR2D3	Q8NGH3	330 aa		11.22	□□□□□ -0.61
PRKCSH-219	ENST00000593101	RPL19	P84098	196 aa	Known RBP	11.21	□□□□□ -0.61
PRKCSH-219	ENST00000593101	ZNF493	Q6ZR52	646 aa		11.21	□□□□□ -0.61
PRKCSH-219	ENST00000593101	FAM231D	Q6ZW35	169 aa		11.21	□□□□□ -0.61
PRKCSH-219	ENST00000593101	OSTC	Q9NRP0	149 aa		11.21	□□□□□ -0.61
PRKCSH-219	ENST00000593101	XKRY2	A2RUG3	117 aa		11.2	□□□□□ -0.62
PRKCSH-219	ENST00000593101	GRIFIN	A4D1Z8	144 aa		11.2	□□□□□ -0.62
PRKCSH-219	ENST00000593101	TYMS	P04818	313 aa		11.2	□□□□□ -0.62
PRKCSH-219	ENST00000593101	S100A4	P26447	101 aa	Known RBP	11.2	□□□□□ -0.62
PRKCSH-219	ENST00000593101	RPS20	P60866	119 aa	Known RBP	11.2	□□□□□ -0.62
PRKCSH-219	ENST00000593101	OR10G8	Q8NGN5	311 aa		11.2	□□□□□ -0.62
PRKCSH-219	ENST00000593101	TMEM263	Q8WUH6	116 aa	Known RBP	11.2	□□□□□ -0.62
PRKCSH-219	ENST00000593101	C16orf74	Q96GX8	76 aa		11.2	□□□□□ -0.62
PRKCSH-219	ENST00000593101	SFRP2	Q96HF1	295 aa		11.2	□□□□□ -0.62
PRKCSH-219	ENST00000593101	RPP21	Q9H633	154 aa	Known RBP	11.2	□□□□□ -0.62
PRKCSH-219	ENST00000593101	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.2	□□□□□ -0.62
PRKCSH-219	ENST00000593101	IGHV4-28	A0A0C4DH34	117 aa		11.19	□□□□□ -0.62
PRKCSH-219	ENST00000593101	ASIP	P42127	132 aa		11.19	□□□□□ -0.62
PRKCSH-219	ENST00000593101	EMP1	P54849	157 aa		11.19	□□□□□ -0.62
PRKCSH-219	ENST00000593101	ZNF415	Q09FC8	603 aa		11.19	□□□□□ -0.62
PRKCSH-219	ENST00000593101	GSN-AS1	Q9NRJ2	163 aa		11.19	□□□□□ -0.62
PRKCSH-219	ENST00000593101	MDFIC	Q9P1T7	246 aa		11.19	□□□□□ -0.62
PRKCSH-219	ENST00000593101	IGHV3-16	A0A0C4DH30	117 aa		11.18	□□□□□ -0.62
PRKCSH-219	ENST00000593101	SNURFL	B1AK76	121 aa		11.18	□□□□□ -0.62
PRKCSH-219	ENST00000593101	DEFB4A	O15263	64 aa		11.18	□□□□□ -0.62
PRKCSH-219	ENST00000593101	APOC3	P02656	99 aa		11.18	□□□□□ -0.62
PRKCSH-219	ENST00000593101	MT-ND4L	P03901	98 aa		11.18	□□□□□ -0.62
PRKCSH-219	ENST00000593101		Q8NAQ8	132 aa		11.18	□□□□□ -0.62
PRKCSH-219	ENST00000593101	RNASE8	Q8TDE3	154 aa	Known RBP	11.18	□□□□□ -0.62
PRKCSH-219	ENST00000593101	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.18	□□□□□ -0.62
PRKCSH-219	ENST00000593101	PPP1R2P9	O14990	202 aa		11.17	□□□□□ -0.62
PRKCSH-219	ENST00000593101	GZMB	P10144	247 aa		11.17	□□□□□ -0.62
PRKCSH-219	ENST00000593101	MEGF8	Q7Z7M0	2845 aa		11.17	□□□□□ -0.62
PRKCSH-219	ENST00000593101		A8MWL6	223 aa		11.16	□□□□□ -0.62
PRKCSH-219	ENST00000593101	CXCL1	P09341	107 aa		11.16	□□□□□ -0.62
PRKCSH-219	ENST00000593101	RNF212	Q495C1	297 aa		11.16	□□□□□ -0.62
PRKCSH-219	ENST00000593101	DNLZ	Q5SXM8	178 aa		11.16	□□□□□ -0.62
PRKCSH-219	ENST00000593101	ZNF575	Q86XF7	245 aa		11.16	□□□□□ -0.62
PRKCSH-219	ENST00000593101	C11orf72	Q8NBR9	251 aa		11.16	□□□□□ -0.62
PRKCSH-219	ENST00000593101	SPX	Q9BT56	116 aa		11.16	□□□□□ -0.62
PRKCSH-219	ENST00000593101	NBEAL2	Q6ZNJ1	2754 aa		11.15	□□□□□ -0.62
PRKCSH-219	ENST00000593101		A0A0J9YWU9	116 aa		11.15	□□□□□ -0.62
PRKCSH-219	ENST00000593101	ARMS2	P0C7Q2	107 aa		11.15	□□□□□ -0.62
PRKCSH-219	ENST00000593101	TCL1A	P56279	114 aa		11.15	□□□□□ -0.62
PRKCSH-219	ENST00000593101	CT83	Q5H943	113 aa		11.15	□□□□□ -0.62
PRKCSH-219	ENST00000593101	SVBP	Q8N300	66 aa		11.15	□□□□□ -0.62
PRKCSH-219	ENST00000593101	CLRN3	Q8NCR9	226 aa		11.15	□□□□□ -0.62
PRKCSH-219	ENST00000593101	ANAPC16	Q96DE5	110 aa		11.15	□□□□□ -0.62
PRKCSH-219	ENST00000593101	NOP10	Q9NPE3	64 aa	Known RBP	11.15	□□□□□ -0.62
PRKCSH-219	ENST00000593101		V9GYV3	84 aa		11.15	□□□□□ -0.62
PRKCSH-219	ENST00000593101	DNAH9	Q9NYC9	4486 aa		11.15	□□□□□ -0.62
PRKCSH-219	ENST00000593101	PLAC8L1	A1L4L8	177 aa		11.14	□□□□□ -0.63
PRKCSH-219	ENST00000593101		H3BVH4	76 aa		11.14	□□□□□ -0.63
PRKCSH-219	ENST00000593101	RNASE3	P12724	160 aa	Known RBP	11.14	□□□□□ -0.63
PRKCSH-219	ENST00000593101	DAZ2	Q13117	558 aa	Known RBP	11.14	□□□□□ -0.63
PRKCSH-219	ENST00000593101	TPPP3	Q9BW30	176 aa		11.14	□□□□□ -0.63
PRKCSH-219	ENST00000593101	IL36B	Q9NZH7	164 aa		11.14	□□□□□ -0.63
PRKCSH-219	ENST00000593101		U3KQK5	164 aa		11.14	□□□□□ -0.63
PRKCSH-219	ENST00000593101		A0A1W2PPQ1	181 aa		11.13	□□□□□ -0.63
PRKCSH-219	ENST00000593101	SNAPIN	O95295	136 aa		11.13	□□□□□ -0.63
PRKCSH-219	ENST00000593101	SPART-AS1	P0CW21	52 aa		11.13	□□□□□ -0.63
PRKCSH-219	ENST00000593101	FER1L6-AS1	Q8NA97	138 aa		11.13	□□□□□ -0.63
PRKCSH-219	ENST00000593101	TSKU	Q8WUA8	353 aa		11.13	□□□□□ -0.63
PRKCSH-219	ENST00000593101	C9orf85	Q96MD7	179 aa		11.13	□□□□□ -0.63
PRKCSH-219	ENST00000593101	C11orf68	Q9H3H3	251 aa	Known RBP	11.13	□□□□□ -0.63
PRKCSH-219	ENST00000593101	PHLDA3	Q9Y5J5	127 aa		11.13	□□□□□ -0.63
PRKCSH-219	ENST00000593101	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.12	□□□□□ -0.63
PRKCSH-219	ENST00000593101	C7orf77	A4D0Y5	90 aa		11.12	□□□□□ -0.63
PRKCSH-219	ENST00000593101	CXorf65	A6NEN9	183 aa		11.12	□□□□□ -0.63
PRKCSH-219	ENST00000593101		M0R2P5	195 aa		11.12	□□□□□ -0.63
PRKCSH-219	ENST00000593101	MED14OS	P0DP75	135 aa		11.12	□□□□□ -0.63
PRKCSH-219	ENST00000593101	FAM222A	Q5U5X8	452 aa		11.12	□□□□□ -0.63
PRKCSH-219	ENST00000593101	CTDSP1	Q9GZU7	261 aa		11.12	□□□□□ -0.63
PRKCSH-219	ENST00000593101	RPS10P5	Q9NQ39	176 aa		11.12	□□□□□ -0.63
PRKCSH-219	ENST00000593101	TRGV1	A0A0A0MS02	117 aa		11.11	□□□□□ -0.63
PRKCSH-219	ENST00000593101	LYRM9	A8MSI8	78 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms