RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 SPANXA1Q9NS26 97 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 A0A0J9YX75 114 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 TMEM238C9JI98 176 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 C3orf84H3BNL1 204 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 LINC00158P58513 81 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 UBE2BP63146 152 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 Q8N2B8 174 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 CST9LQ9H4G1 147 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 TPSG1Q9NRR2 321 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 LINC00474Q9P2X8 69 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 AKAP6Q13023 2319 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 DEFA6Q01524 100 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 ANXA2RQ3ZCQ2 193 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 LBHQ53QV2 105 aaPredicted RBP4.82□□□□□ -1.64
SMAD4-212ENST00000591126 SPRNQ5BIV9 151 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 K7EQG2 157 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 APOHP02749 345 aaPredicted RBP4.82□□□□□ -1.64
SMAD4-212ENST00000591126 FAM231DQ6ZW35 169 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 DEFB125Q8N687 156 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 ZNF503Q96F45 646 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 ZC2HC1AQ96GY0 325 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 WWC2-AS2Q96NR7 200 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 CHCHD7Q9BUK0 85 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 IGKV1OR2-108A0A075B7D4 117 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 TMEM88Q6PEY1 159 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 TMEM242Q9NWH2 141 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 TRBV6-1A0A0K0K1D8 114 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 TRGC2P03986 189 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 ANKRD39Q53RE8 183 aa4.82□□□□□ -1.64
SMAD4-212ENST00000591126 SDHCQ99643 169 aaPredicted RBP4.82□□□□□ -1.64
SMAD4-212ENST00000591126 PCNX1Q96RV3 2341 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 ALPK2Q86TB3 2170 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 DSCAMO60469 2012 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 ZNF815PA8K554 130 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 WISP2O76076 250 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 HLA-DMBP28068 263 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 LYZL1Q6UWQ5 148 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 APRG1Q8IVJ8 170 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 RNF126Q9BV68 326 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 KLK15Q9H2R5 256 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 KLK9Q9UKQ9 250 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 MALRD1Q5VYJ5 2156 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 SRP19P09132 144 aaKnown RBP4.81□□□□□ -1.64
SMAD4-212ENST00000591126 KIAA1644Q3SXP7 199 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 PIK3CD-AS1Q5SR53 167 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 PKDREJQ9NTG1 2253 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 C14orf178Q8N769 122 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-212ENST00000591126 UBE2WQ96B02 151 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 GSN-AS1Q9NRJ2 163 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 DPM2O94777 84 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 LY6G6CO95867 125 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 IL15RAQ13261 267 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 LINC00518Q8N0U6 118 aa4.81□□□□□ -1.64
SMAD4-212ENST00000591126 LSM4Q9Y4Z0 139 aaKnown RBP4.81□□□□□ -1.64
SMAD4-212ENST00000591126 ANKHD1Q8IWZ3 2542 aaKnown RBP4.8□□□□□ -1.64
SMAD4-212ENST00000591126 MRGPRG-AS1Q2M3A8 158 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 FAM24BQ8N5W8 94 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 PROK1P58294 105 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 PRR20EP86478 221 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 PRR20CP86479 221 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 PRR20DP86480 221 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 PRR20BP86481 221 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 PRR20AP86496 221 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 BATFQ16520 125 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 TRAV8-4A0A0B4J246 113 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 IGLV1-51P01701 117 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 TIRAPP58753 221 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 CFHR3Q02985 330 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 FHL3Q13643 280 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 RSPO3Q9BXY4 272 aaPredicted RBP4.8□□□□□ -1.64
SMAD4-212ENST00000591126 FGF23Q9GZV9 251 aaPredicted RBP4.8□□□□□ -1.64
SMAD4-212ENST00000591126 CACNA1AO00555 2505 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 NCKAP5O14513 1909 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 LEPROTO15243 131 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 Q8N976 141 aa4.8□□□□□ -1.64
SMAD4-212ENST00000591126 A0A0J9YY99 117 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 NDUFA1O15239 70 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 IGKV1-17P01599 117 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 HIST1H4GQ99525 98 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 IGHV3-73A0A0B4J1V6 119 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 CRYGBP07316 175 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 RNF224P0DH78 156 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 HERV-K104P63124 156 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 LINC00322Q6ZN03 302 aaPredicted RBP4.79□□□□□ -1.64
SMAD4-212ENST00000591126 GTF2H5Q6ZYL4 71 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 FANCD2OSQ96PS1 177 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 CHAC1Q9BUX1 264 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 PRUNE2Q8WUY3 3088 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 NCOR2Q9Y618 2525 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 SIVA1O15304 175 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 AMN1Q8IY45 258 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 Q8TAT8 98 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 MPDZO75970 2070 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 NBASA2RRP1 2371 aa4.79□□□□□ -1.64
SMAD4-212ENST00000591126 TRBV7-3A0A075B6L6 115 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 Q6ZRM9 215 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 BOD1L2Q8IYS8 172 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 AGPAT4-IT1Q9H0P7 198 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 NDUFA12Q9UI09 145 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 F8WDY8 70 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms