RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 SPATA25Q9BR10 227 aa13.18□□□□□ -0.3
H3F3B-206ENST00000587560 CARHSP1Q9Y2V2 147 aaKnown RBP13.18□□□□□ -0.3
H3F3B-206ENST00000587560 SMIM9A6NGZ8 99 aa13.17□□□□□ -0.3
H3F3B-206ENST00000587560 PRM2P04554 102 aa13.17□□□□□ -0.3
H3F3B-206ENST00000587560 MGST1P10620 155 aaKnown RBP13.17□□□□□ -0.3
H3F3B-206ENST00000587560 LINC01587Q99440 93 aa13.17□□□□□ -0.3
H3F3B-206ENST00000587560 RYR1P21817 5038 aa13.17□□□□□ -0.3
H3F3B-206ENST00000587560 DNAH9Q9NYC9 4486 aa13.17□□□□□ -0.3
H3F3B-206ENST00000587560 PLAC8L1A1L4L8 177 aa13.16□□□□□ -0.3
H3F3B-206ENST00000587560 KRBOX1C9JBD0 128 aa13.16□□□□□ -0.3
H3F3B-206ENST00000587560 AZU1P20160 251 aa13.16□□□□□ -0.3
H3F3B-206ENST00000587560 DNLZQ5SXM8 178 aa13.16□□□□□ -0.3
H3F3B-206ENST00000587560 Q8NAQ8 132 aa13.16□□□□□ -0.3
H3F3B-206ENST00000587560 NUDT10Q8NFP7 164 aa13.16□□□□□ -0.3
H3F3B-206ENST00000587560 OR11H2Q8NH07 326 aa13.16□□□□□ -0.3
H3F3B-206ENST00000587560 NUDT11Q96G61 164 aa13.16□□□□□ -0.3
H3F3B-206ENST00000587560 TP53TG3Q9ULZ0 132 aa13.16□□□□□ -0.3
H3F3B-206ENST00000587560 ZNF705GA8MUZ8 300 aaPredicted RBP13.15□□□□□ -0.3
H3F3B-206ENST00000587560 F8W036 122 aa13.15□□□□□ -0.3
H3F3B-206ENST00000587560 MUC21Q5SSG8 566 aa13.15□□□□□ -0.3
H3F3B-206ENST00000587560 PRR27Q6MZM9 219 aa13.15□□□□□ -0.3
H3F3B-206ENST00000587560 C11orf72Q8NBR9 251 aa13.15□□□□□ -0.3
H3F3B-206ENST00000587560 RNASE8Q8TDE3 154 aaKnown RBP13.15□□□□□ -0.3
H3F3B-206ENST00000587560 TENM2Q9NT68 2774 aa13.15□□□□□ -0.3
H3F3B-206ENST00000587560 IGHV3OR16-12A0A075B7B8 117 aa13.14□□□□□ -0.31
H3F3B-206ENST00000587560 TYMSP04818 313 aa13.14□□□□□ -0.31
H3F3B-206ENST00000587560 CXCL1P09341 107 aa13.14□□□□□ -0.31
H3F3B-206ENST00000587560 NHLRC4P0CG21 123 aaPredicted RBP13.14□□□□□ -0.31
H3F3B-206ENST00000587560 PNRC1Q12796 327 aaPredicted RBP13.14□□□□□ -0.31
H3F3B-206ENST00000587560 IL17DQ8TAD2 202 aa13.14□□□□□ -0.31
H3F3B-206ENST00000587560 KCNS1Q96KK3 526 aa13.14□□□□□ -0.31
H3F3B-206ENST00000587560 TMEM208Q9BTX3 173 aa13.14□□□□□ -0.31
H3F3B-206ENST00000587560 RNASE7Q9H1E1 156 aaKnown RBP13.14□□□□□ -0.31
H3F3B-206ENST00000587560 OSTCQ9NRP0 149 aa13.14□□□□□ -0.31
H3F3B-206ENST00000587560 MIFP14174 115 aa13.13□□□□□ -0.31
H3F3B-206ENST00000587560 FAM159AQ6UWV7 190 aa13.13□□□□□ -0.31
H3F3B-206ENST00000587560 HUWE1Q7Z6Z7 4374 aaKnown RBP13.12□□□□□ -0.31
H3F3B-206ENST00000587560 IGHV3-16A0A0C4DH30 117 aa13.12□□□□□ -0.31
H3F3B-206ENST00000587560 GNRH2O43555 120 aa13.12□□□□□ -0.31
H3F3B-206ENST00000587560 RPL19P84098 196 aaKnown RBP13.12□□□□□ -0.31
H3F3B-206ENST00000587560 ADIRFQ15847 76 aa13.12□□□□□ -0.31
H3F3B-206ENST00000587560 RRN3P1Q2M238 152 aa13.12□□□□□ -0.31
H3F3B-206ENST00000587560 IBA57Q5T440 356 aaKnown RBP13.12□□□□□ -0.31
H3F3B-206ENST00000587560 ZNF493Q6ZR52 646 aa13.12□□□□□ -0.31
H3F3B-206ENST00000587560 TMEM263Q8WUH6 116 aaKnown RBP13.12□□□□□ -0.31
H3F3B-206ENST00000587560 DNAH1Q9P2D7 4330 aa13.12□□□□□ -0.31
H3F3B-206ENST00000587560 MUC4Q99102 2169 aa13.11□□□□□ -0.31
H3F3B-206ENST00000587560 IGHV4-28A0A0C4DH34 117 aa13.11□□□□□ -0.31
H3F3B-206ENST00000587560 B4DEV8 164 aa13.11□□□□□ -0.31
H3F3B-206ENST00000587560 P01737 135 aa13.11□□□□□ -0.31
H3F3B-206ENST00000587560 ORM1P02763 201 aa13.11□□□□□ -0.31
H3F3B-206ENST00000587560 RNASE3P12724 160 aaKnown RBP13.11□□□□□ -0.31
H3F3B-206ENST00000587560 CT83Q5H943 113 aa13.11□□□□□ -0.31
H3F3B-206ENST00000587560 SFRP2Q96HF1 295 aa13.11□□□□□ -0.31
H3F3B-206ENST00000587560 NAGKQ9UJ70 344 aa13.11□□□□□ -0.31
H3F3B-206ENST00000587560 V9GYV3 84 aa13.11□□□□□ -0.31
H3F3B-206ENST00000587560 HERC2O95714 4834 aa13.11□□□□□ -0.31
H3F3B-206ENST00000587560 TRGV11A0A075B6L2 103 aa13.1□□□□□ -0.31
H3F3B-206ENST00000587560 CBY3A6NI87 242 aa13.1□□□□□ -0.31
H3F3B-206ENST00000587560 M0R036 132 aa13.1□□□□□ -0.31
H3F3B-206ENST00000587560 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
H3F3B-206ENST00000587560 C16orf74Q96GX8 76 aa13.1□□□□□ -0.31
H3F3B-206ENST00000587560 C9orf85Q96MD7 179 aa13.1□□□□□ -0.31
H3F3B-206ENST00000587560 C11orf68Q9H3H3 251 aaKnown RBP13.1□□□□□ -0.31
H3F3B-206ENST00000587560 RPP21Q9H633 154 aaKnown RBP13.1□□□□□ -0.31
H3F3B-206ENST00000587560 MDFICQ9P1T7 246 aa13.1□□□□□ -0.31
H3F3B-206ENST00000587560 TMEM189A5PLL7 270 aa13.09□□□□□ -0.31
H3F3B-206ENST00000587560 TCL1AP56279 114 aa13.09□□□□□ -0.31
H3F3B-206ENST00000587560 ERVFC1-1P60608 527 aa13.09□□□□□ -0.31
H3F3B-206ENST00000587560 OR2D3Q8NGH3 330 aa13.09□□□□□ -0.31
H3F3B-206ENST00000587560 SSBP4Q9BWG4 385 aaPredicted RBP13.09□□□□□ -0.31
H3F3B-206ENST00000587560 ZMAT4Q9H898 229 aa13.09□□□□□ -0.31
H3F3B-206ENST00000587560 SCRT2Q9NQ03 307 aa13.09□□□□□ -0.31
H3F3B-206ENST00000587560 IGLC6P0CF74 106 aa13.08□□□□□ -0.32
H3F3B-206ENST00000587560 HTN1P15515 57 aa13.08□□□□□ -0.32
H3F3B-206ENST00000587560 OR10G8Q8NGN5 311 aa13.08□□□□□ -0.32
H3F3B-206ENST00000587560 GATCO43716 136 aaKnown RBP13.07□□□□□ -0.32
H3F3B-206ENST00000587560 MED14OSP0DP75 135 aa13.07□□□□□ -0.32
H3F3B-206ENST00000587560 RPS20P60866 119 aaKnown RBP13.07□□□□□ -0.32
H3F3B-206ENST00000587560 DAZ2Q13117 558 aaKnown RBP13.07□□□□□ -0.32
H3F3B-206ENST00000587560 GSN-AS1Q9NRJ2 163 aa13.07□□□□□ -0.32
H3F3B-206ENST00000587560 IL36BQ9NZH7 164 aa13.07□□□□□ -0.32
H3F3B-206ENST00000587560 TMSB15BA0A087X1C1 80 aa13.06□□□□□ -0.32
H3F3B-206ENST00000587560 GRIFINA4D1Z8 144 aa13.06□□□□□ -0.32
H3F3B-206ENST00000587560 SNAI2O43623 268 aa13.06□□□□□ -0.32
H3F3B-206ENST00000587560 FOXA3P55318 350 aaPredicted RBP13.06□□□□□ -0.32
H3F3B-206ENST00000587560 ZNF415Q09FC8 603 aa13.06□□□□□ -0.32
H3F3B-206ENST00000587560 RNF212Q495C1 297 aa13.06□□□□□ -0.32
H3F3B-206ENST00000587560 LINC00612Q8N6U2 182 aa13.06□□□□□ -0.32
H3F3B-206ENST00000587560 C15orf54Q8N8G6 183 aa13.06□□□□□ -0.32
H3F3B-206ENST00000587560 PTH2Q96A98 100 aa13.06□□□□□ -0.32
H3F3B-206ENST00000587560 WWC2-AS2Q96NR7 200 aa13.06□□□□□ -0.32
H3F3B-206ENST00000587560 OR5AL1P0C617 328 aa13.05□□□□□ -0.32
H3F3B-206ENST00000587560 GZMBP10144 247 aa13.05□□□□□ -0.32
H3F3B-206ENST00000587560 ASIPP42127 132 aa13.05□□□□□ -0.32
H3F3B-206ENST00000587560 CLRN3Q8NCR9 226 aa13.05□□□□□ -0.32
H3F3B-206ENST00000587560 GTSF1Q8WW33 167 aa13.05□□□□□ -0.32
H3F3B-206ENST00000587560 SPXQ9BT56 116 aa13.05□□□□□ -0.32
H3F3B-206ENST00000587560 STAB2Q8WWQ8 2551 aa13.04□□□□□ -0.32
H3F3B-206ENST00000587560 FAM231BA6NCW3 169 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms