RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 KLK5Q9Y337 293 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 DCHS2Q6V1P9 2916 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 TRAV8-3A0A0A6YYJ7 113 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM223A0PJW6 202 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 C17orf51A8MQB3 221 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 A8MWL6 223 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 LYRM1O43325 122 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 APCSP02743 223 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 TRGV3P03979 118 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 P0C879 139 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 PAX6P26367 422 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 ZNF138P52744 262 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 ACOT6Q3I5F7 207 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 PIGYQ3MUY2 71 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 SNX29P2Q8IUI4 249 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 MAPK1IP1LQ8NDC0 245 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 ZNF680Q8NEM1 530 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 B9D2Q9BPU9 175 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 GGTLC1Q9BX51 225 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 FGF23Q9GZV9 251 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 FXYD6Q9H0Q3 95 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 HRASLSQ9HDD0 168 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 TNFRSF19Q9NS68 423 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 RABAC1Q9UI14 185 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 CACNA1CQ13936 2221 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 DNAH10Q8IVF4 4471 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 CSPG4Q6UVK1 2322 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 ABCA13Q86UQ4 5058 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 DYNC1H1Q14204 4646 aaKnown RBP1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 IGLV1-50A0A075B6I6 118 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 IGHV3OR15-7A0A075B7D8 119 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 C7orf66A4D0T2 115 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 OR2T8A6NH00 312 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 HMSDA8MTL9 139 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 A8MTW9 85 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 EPM2AB3EWF7 344 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 H0Y9J4 135 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 ISLRO14498 428 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 UBE2L6O14933 153 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 SYNGR2O43760 224 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 GNG7O60262 68 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 PPP1R17O96001 155 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 NPPCP23582 126 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 CSN1S1P47710 185 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 GTF2A1P52655 376 aaPredicted RBP1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 PIGPP57054 158 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 RRAS2P62070 204 aaPredicted RBP1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 KHDC3LQ587J8 217 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 CENPWQ5EE01 88 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 C6orf201Q7Z4U5 140 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 OR13C8Q8NGS7 320 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 C18orf15Q96N68 181 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 VSIRQ9H7M9 311 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 PLSCR3Q9NRY6 295 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 RFNGQ9Y644 331 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 MPDZO75970 2070 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 NUPR2A6NF83 97 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 CEBPZOSA8MTT3 80 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 PSPHP1O15172 72 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 PITX3O75364 302 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 IGLV2-23P01705 113 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 S100A8P05109 93 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 MIFP14174 115 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 ORM2P19652 201 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 OPRK1P41145 380 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 SULT1A1P50225 295 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 NKX2-5P52952 324 aaPredicted RBP1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 TPPP2P59282 170 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 PPP1R1AQ13522 171 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 FOXI2Q6ZQN5 318 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 IDO2Q6ZQW0 420 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 ZCCHC24Q8N2G6 241 aaKnown RBP1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 KCNS1Q96KK3 526 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 LINC00477Q96M19 166 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 BANF2Q9H503 90 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 COMMD3Q9UBI1 195 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 SPTBP11277 2137 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 IGHV3-49A0A0A0MS15 119 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 A0A1B0GV50 99 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 I3L521 148 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 BET1O15155 118 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 CRYZL1O95825 349 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 CA2P00918 260 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 IFNA17P01571 189 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 IGLV1-51P01701 117 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 OR10J4P0C629 311 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 CLDN12P56749 244 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 RHOBP62745 196 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 TNFRSF9Q07011 255 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 OTPQ5XKR4 325 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 EBLN2Q6P2I7 272 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 PRSS54Q6PEW0 395 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 BPIFA4PQ86YQ2 179 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 CEND1Q8N111 149 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 C15orf53Q8NAA6 179 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 OR10K1Q8NGX5 313 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 SFRP2Q96HF1 295 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 RPRMQ9NS64 109 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 TNFSF18Q9UNG2 199 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 PSG8Q9UQ74 426 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms