RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 CA1P00915 261 aaPredicted RBP8.85□□□□□ -0.99
GGA3-217ENST00000583667 IGLV1-51P01701 117 aa8.85□□□□□ -0.99
GGA3-217ENST00000583667 MT-ND6P03923 174 aa8.85□□□□□ -0.99
GGA3-217ENST00000583667 CD300EQ496F6 205 aaPredicted RBP8.85□□□□□ -0.99
GGA3-217ENST00000583667 WDR73Q6P4I2 378 aa8.85□□□□□ -0.99
GGA3-217ENST00000583667 WFDC3Q8IUB2 231 aa8.85□□□□□ -0.99
GGA3-217ENST00000583667 GTSF1Q8WW33 167 aa8.85□□□□□ -0.99
GGA3-217ENST00000583667 FAM110AQ9BQ89 295 aa8.85□□□□□ -0.99
GGA3-217ENST00000583667 TMA7Q9Y2S6 64 aaKnown RBP8.85□□□□□ -0.99
GGA3-217ENST00000583667 A0A1B0GW15 77 aa8.84□□□□□ -0.99
GGA3-217ENST00000583667 A0A1B0GXF2 115 aa8.84□□□□□ -0.99
GGA3-217ENST00000583667 TRGC2P03986 189 aa8.84□□□□□ -0.99
GGA3-217ENST00000583667 ZNF688P0C7X2 276 aa8.84□□□□□ -0.99
GGA3-217ENST00000583667 PSMG4Q5JS54 123 aa8.84□□□□□ -0.99
GGA3-217ENST00000583667 ACTL10Q5JWF8 245 aa8.84□□□□□ -0.99
GGA3-217ENST00000583667 EBLN2Q6P2I7 272 aa8.84□□□□□ -0.99
GGA3-217ENST00000583667 LINC00482Q8N8I6 264 aa8.84□□□□□ -0.99
GGA3-217ENST00000583667 GATD1Q8NB37 220 aa8.84□□□□□ -0.99
GGA3-217ENST00000583667 KIAA1109Q2LD37 5005 aa8.84□□□□□ -0.99
GGA3-217ENST00000583667 TRAV21A0A0B4J279 112 aa8.83□□□□□ -1
GGA3-217ENST00000583667 F6UB75 175 aa8.83□□□□□ -1
GGA3-217ENST00000583667 IGLC6P0CF74 106 aa8.83□□□□□ -1
GGA3-217ENST00000583667 LEPP41159 167 aa8.83□□□□□ -1
GGA3-217ENST00000583667 TFPI2P48307 235 aa8.83□□□□□ -1
GGA3-217ENST00000583667 DNLZQ5SXM8 178 aa8.83□□□□□ -1
GGA3-217ENST00000583667 ZNF705DP0CH99 300 aaPredicted RBP8.82□□□□□ -1
GGA3-217ENST00000583667 ZNF705BP0CI00 300 aaPredicted RBP8.82□□□□□ -1
GGA3-217ENST00000583667 PRB4P10163 310 aaPredicted RBP8.82□□□□□ -1
GGA3-217ENST00000583667 HLA-DRB4P13762 266 aa8.82□□□□□ -1
GGA3-217ENST00000583667 TSPOP30536 169 aa8.82□□□□□ -1
GGA3-217ENST00000583667 INSL3P51460 131 aa8.82□□□□□ -1
GGA3-217ENST00000583667 TCL1AP56279 114 aa8.82□□□□□ -1
GGA3-217ENST00000583667 AMTNQ6UX39 209 aa8.82□□□□□ -1
GGA3-217ENST00000583667 TMEM136Q6ZRR5 245 aa8.82□□□□□ -1
GGA3-217ENST00000583667 SSBP4Q9BWG4 385 aaPredicted RBP8.82□□□□□ -1
GGA3-217ENST00000583667 CNFNQ9BYD5 112 aa8.82□□□□□ -1
GGA3-217ENST00000583667 HLA-DRB4X5D2U9 266 aa8.82□□□□□ -1
GGA3-217ENST00000583667 IGKV3D-20A0A0C4DH25 116 aa8.81□□□□□ -1
GGA3-217ENST00000583667 F2Z2F3 143 aa8.81□□□□□ -1
GGA3-217ENST00000583667 H3BMM0 161 aa8.81□□□□□ -1
GGA3-217ENST00000583667 HLA-DQA1P01909 254 aa8.81□□□□□ -1
GGA3-217ENST00000583667 S100A8P05109 93 aa8.81□□□□□ -1
GGA3-217ENST00000583667 GPX1P07203 203 aa8.81□□□□□ -1
GGA3-217ENST00000583667 CTRLP40313 264 aa8.81□□□□□ -1
GGA3-217ENST00000583667 DEFB1P60022 68 aa8.81□□□□□ -1
GGA3-217ENST00000583667 GDF5OSQ5U4N7 250 aa8.81□□□□□ -1
GGA3-217ENST00000583667 FRZBQ92765 325 aa8.81□□□□□ -1
GGA3-217ENST00000583667 MAP6D1Q9H9H5 199 aa8.81□□□□□ -1
GGA3-217ENST00000583667 C11orf21Q9P2W6 132 aa8.81□□□□□ -1
GGA3-217ENST00000583667 TRAPPC1Q9Y5R8 145 aa8.81□□□□□ -1
GGA3-217ENST00000583667 SELENOKQ9Y6D0 94 aa8.81□□□□□ -1
GGA3-217ENST00000583667 PLECQ15149 4684 aaKnown RBP8.81□□□□□ -1
GGA3-217ENST00000583667 A0A1B0GUT8 65 aa8.8□□□□□ -1
GGA3-217ENST00000583667 HIST1H2BKO60814 126 aa8.8□□□□□ -1
GGA3-217ENST00000583667 ORM1P02763 201 aa8.8□□□□□ -1
GGA3-217ENST00000583667 HIST1H2BJP06899 126 aa8.8□□□□□ -1
GGA3-217ENST00000583667 HIST1H2BOP23527 126 aa8.8□□□□□ -1
GGA3-217ENST00000583667 HIST1H2BBP33778 126 aa8.8□□□□□ -1
GGA3-217ENST00000583667 HIST1H2BDP58876 126 aa8.8□□□□□ -1
GGA3-217ENST00000583667 DEFB131AP59861 70 aa8.8□□□□□ -1
GGA3-217ENST00000583667 HIST1H2BCP62807 126 aa8.8□□□□□ -1
GGA3-217ENST00000583667 RIGQ13278 110 aa8.8□□□□□ -1
GGA3-217ENST00000583667 HIST2H2BEQ16778 126 aa8.8□□□□□ -1
GGA3-217ENST00000583667 TDRG1Q3Y452 100 aa8.8□□□□□ -1
GGA3-217ENST00000583667 COA6Q5JTJ3 125 aaKnown RBP8.8□□□□□ -1
GGA3-217ENST00000583667 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.8□□□□□ -1
GGA3-217ENST00000583667 PRR9Q5T870 116 aa8.8□□□□□ -1
GGA3-217ENST00000583667 HIST1H2BHQ93079 126 aa8.8□□□□□ -1
GGA3-217ENST00000583667 HIST1H2BNQ99877 126 aa8.8□□□□□ -1
GGA3-217ENST00000583667 HIST1H2BMQ99879 126 aa8.8□□□□□ -1
GGA3-217ENST00000583667 IGHV4-4A0A075B6R2 117 aa8.79□□□□□ -1
GGA3-217ENST00000583667 C5orf52A6NGY3 159 aa8.79□□□□□ -1
GGA3-217ENST00000583667 SAP30O75446 220 aa8.79□□□□□ -1
GGA3-217ENST00000583667 ZNF324O75467 553 aaPredicted RBP8.79□□□□□ -1
GGA3-217ENST00000583667 PF4P02776 101 aa8.79□□□□□ -1
GGA3-217ENST00000583667 FRMD6-AS1P0C7T7 363 aa8.79□□□□□ -1
GGA3-217ENST00000583667 TRGC1P0CF51 173 aa8.79□□□□□ -1
GGA3-217ENST00000583667 MED14OSP0DP75 135 aa8.79□□□□□ -1
GGA3-217ENST00000583667 GZMBP10144 247 aa8.79□□□□□ -1
GGA3-217ENST00000583667 CDKN1BP46527 198 aa8.79□□□□□ -1
GGA3-217ENST00000583667 HBBP68871 147 aa8.79□□□□□ -1
GGA3-217ENST00000583667 FABP9Q0Z7S8 132 aa8.79□□□□□ -1
GGA3-217ENST00000583667 ZNF493Q6ZR52 646 aa8.79□□□□□ -1
GGA3-217ENST00000583667 PGLYRP4Q96LB8 373 aa8.79□□□□□ -1
GGA3-217ENST00000583667 RCHY1Q96PM5 261 aa8.79□□□□□ -1
GGA3-217ENST00000583667 LOC105371267A0A1B0GV96 52 aa8.78□□□□□ -1
GGA3-217ENST00000583667 SNURFLB1AK76 121 aa8.78□□□□□ -1
GGA3-217ENST00000583667 SNAI2O43623 268 aa8.78□□□□□ -1
GGA3-217ENST00000583667 OR5AL1P0C617 328 aa8.78□□□□□ -1
GGA3-217ENST00000583667 ODF3L2Q3SX64 289 aa8.78□□□□□ -1
GGA3-217ENST00000583667 MRPL54Q6P161 138 aaKnown RBP8.78□□□□□ -1
GGA3-217ENST00000583667 LYZL1Q6UWQ5 148 aa8.78□□□□□ -1
GGA3-217ENST00000583667 FER1L6-AS1Q8NA97 138 aa8.78□□□□□ -1
GGA3-217ENST00000583667 BORCS7Q96B45 105 aa8.78□□□□□ -1
GGA3-217ENST00000583667 KCNS1Q96KK3 526 aa8.78□□□□□ -1
GGA3-217ENST00000583667 MRPL18Q9H0U6 180 aaKnown RBP8.78□□□□□ -1
GGA3-217ENST00000583667 C7orf71A4D174 169 aa8.77□□□□□ -1.01
GGA3-217ENST00000583667 AMBPP02760 352 aa8.77□□□□□ -1.01
GGA3-217ENST00000583667 RNASE4P34096 147 aaKnown RBP8.77□□□□□ -1.01
GGA3-217ENST00000583667 C20orf144Q9BQM9 153 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms