RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 CD33P20138 364 aa6.98□□□□□ -1.29
SS18-220ENST00000582092 EDN2P20800 178 aa6.98□□□□□ -1.29
SS18-220ENST00000582092 ASIPP42127 132 aa6.98□□□□□ -1.29
SS18-220ENST00000582092 CACNG7P62955 275 aa6.98□□□□□ -1.29
SS18-220ENST00000582092 NSUN5P1Q3KNT7 163 aa6.98□□□□□ -1.29
SS18-220ENST00000582092 SPANXN1Q5VSR9 72 aa6.98□□□□□ -1.29
SS18-220ENST00000582092 GFI1BQ5VTD9 330 aa6.98□□□□□ -1.29
SS18-220ENST00000582092 FAM159AQ6UWV7 190 aa6.98□□□□□ -1.29
SS18-220ENST00000582092 RAX2Q96IS3 184 aa6.98□□□□□ -1.29
SS18-220ENST00000582092 KCNS1Q96KK3 526 aa6.98□□□□□ -1.29
SS18-220ENST00000582092 PACRGQ96M98 296 aaPredicted RBP6.98□□□□□ -1.29
SS18-220ENST00000582092 TIMM8BQ9Y5J9 83 aaPredicted RBP6.98□□□□□ -1.29
SS18-220ENST00000582092 TRAV25A0A0B4J276 109 aa6.97□□□□□ -1.29
SS18-220ENST00000582092 IGKV3-20P01619 116 aa6.97□□□□□ -1.29
SS18-220ENST00000582092 CSN3P07498 182 aa6.97□□□□□ -1.29
SS18-220ENST00000582092 SMIM6P0DI80 62 aa6.97□□□□□ -1.29
SS18-220ENST00000582092 SLAQ13239 276 aa6.97□□□□□ -1.29
SS18-220ENST00000582092 FOXI2Q6ZQN5 318 aa6.97□□□□□ -1.29
SS18-220ENST00000582092 C12orf57Q99622 126 aa6.97□□□□□ -1.29
SS18-220ENST00000582092 LOC102724200A0A096LPH7 203 aaPredicted RBP6.96□□□□□ -1.3
SS18-220ENST00000582092 MUC21A0A0G2JKD1 596 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 A0A0J9YX75 114 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 MUC21A0A140T8X8 626 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 HSBP1O75506 76 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 PF4P02776 101 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 NTF3P20783 257 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 CTRLP40313 264 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 DEFB131AP59861 70 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 KRTAP10-3P60369 221 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 DEFB114Q30KQ6 69 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 MUC21Q5SSG8 566 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 NDUFA11Q86Y39 141 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 LINC00518Q8N0U6 118 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 ODF3Q96PU9 254 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 SPAG8Q99932 426 aaPredicted RBP6.96□□□□□ -1.3
SS18-220ENST00000582092 PHLDA3Q9Y5J5 127 aa6.96□□□□□ -1.3
SS18-220ENST00000582092 NBEAL1Q6ZS30 2694 aa6.95□□□□□ -1.3
SS18-220ENST00000582092 C7orf71A4D174 169 aa6.95□□□□□ -1.3
SS18-220ENST00000582092 SAP30O75446 220 aa6.95□□□□□ -1.3
SS18-220ENST00000582092 SERF1AO75920 110 aa6.95□□□□□ -1.3
SS18-220ENST00000582092 IGLC6P0CF74 106 aa6.95□□□□□ -1.3
SS18-220ENST00000582092 DEFB1P60022 68 aa6.95□□□□□ -1.3
SS18-220ENST00000582092 S100A12P80511 92 aa6.95□□□□□ -1.3
SS18-220ENST00000582092 GDF5OSQ5U4N7 250 aa6.95□□□□□ -1.3
SS18-220ENST00000582092 RNASEKQ6P5S7 137 aaKnown RBP6.95□□□□□ -1.3
SS18-220ENST00000582092 TMEM256Q8N2U0 113 aa6.95□□□□□ -1.3
SS18-220ENST00000582092 ZFAND2AQ8N6M9 145 aa6.95□□□□□ -1.3
SS18-220ENST00000582092 PRSS3P2Q8NHM4 247 aa6.95□□□□□ -1.3
SS18-220ENST00000582092 HIST1H2BLQ99880 126 aa6.95□□□□□ -1.3
SS18-220ENST00000582092 ALKBH7Q9BT30 221 aaPredicted RBP6.95□□□□□ -1.3
SS18-220ENST00000582092 MGAM2Q2M2H8 2515 aa6.95□□□□□ -1.3
SS18-220ENST00000582092 TRAV12-3A0A0B4J271 114 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 IGKV3D-20A0A0C4DH25 116 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 AMBPP02760 352 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 SMIM17P0DL12 118 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 PMCHP20382 165 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 CKS2P33552 79 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 CDKN1BP46527 198 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 AMTP48728 403 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 ANXA2RQ3ZCQ2 193 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 CD300EQ496F6 205 aaPredicted RBP6.94□□□□□ -1.3
SS18-220ENST00000582092 FAM104BQ5XKR9 115 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 ZNF493Q6ZR52 646 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 FA2HQ7L5A8 372 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 TMEM61Q8N0U2 210 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 ORMDL3Q8N138 153 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 C18orf32Q8TCD1 76 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 TMEM191AQ9H0A3 160 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 NIT2Q9NQR4 276 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 DNHD1Q96M86 4753 aa6.94□□□□□ -1.3
SS18-220ENST00000582092 KNCNA6PVL3 124 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 H3BVH4 76 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 SCGB1D1O95968 90 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 PPBPP02775 128 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 OR5AL1P0C617 328 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 MED14OSP0DP75 135 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 FHL3Q13643 280 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 IQCJQ1A5X6 159 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 HIST2H2BDQ6DRA6 164 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 NIT1Q86X76 327 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 STHQ8IWL8 128 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 GATD1Q8NB37 220 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 FAM19A4Q96LR4 140 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 PRELID3AQ96N28 172 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 SIGLEC8Q9NYZ4 499 aa6.93□□□□□ -1.3
SS18-220ENST00000582092 KLLNB2CW77 178 aa6.92□□□□□ -1.3
SS18-220ENST00000582092 OR11H12B2RN74 326 aa6.92□□□□□ -1.3
SS18-220ENST00000582092 M0R2Z0 102 aa6.92□□□□□ -1.3
SS18-220ENST00000582092 CD7P09564 240 aa6.92□□□□□ -1.3
SS18-220ENST00000582092 LINC00614P0C842 121 aa6.92□□□□□ -1.3
SS18-220ENST00000582092 ESDP10768 282 aa6.92□□□□□ -1.3
SS18-220ENST00000582092 NUTF2P61970 127 aaKnown RBP6.92□□□□□ -1.3
SS18-220ENST00000582092 DEFA6Q01524 100 aa6.92□□□□□ -1.3
SS18-220ENST00000582092 SPINK13Q1W4C9 94 aa6.92□□□□□ -1.3
SS18-220ENST00000582092 PRR9Q5T870 116 aa6.92□□□□□ -1.3
SS18-220ENST00000582092 ADAMTSL5Q6ZMM2 481 aa6.92□□□□□ -1.3
SS18-220ENST00000582092 SYT8Q8NBV8 401 aa6.92□□□□□ -1.3
SS18-220ENST00000582092 OR2K2Q8NGT1 345 aa6.92□□□□□ -1.3
SS18-220ENST00000582092 CHCHD1Q96BP2 118 aaKnown RBP6.92□□□□□ -1.3
SS18-220ENST00000582092 C11orf21Q9P2W6 132 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms