RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 Q6AWC8 147 aa9.3□□□□□ -0.92
SRSF1-204ENST00000581979 SNURFLB1AK76 121 aa9.29□□□□□ -0.92
SRSF1-204ENST00000581979 HLA-DRB4P13762 266 aa9.29□□□□□ -0.92
SRSF1-204ENST00000581979 TSPOP30536 169 aa9.29□□□□□ -0.92
SRSF1-204ENST00000581979 FOXA3P55318 350 aaPredicted RBP9.29□□□□□ -0.92
SRSF1-204ENST00000581979 RAB4BP61018 213 aa9.29□□□□□ -0.92
SRSF1-204ENST00000581979 ZNF124Q15973 351 aa9.29□□□□□ -0.92
SRSF1-204ENST00000581979 WDR73Q6P4I2 378 aa9.29□□□□□ -0.92
SRSF1-204ENST00000581979 APRG1Q8IVJ8 170 aa9.29□□□□□ -0.92
SRSF1-204ENST00000581979 FRZBQ92765 325 aa9.29□□□□□ -0.92
SRSF1-204ENST00000581979 BORCS7Q96B45 105 aa9.29□□□□□ -0.92
SRSF1-204ENST00000581979 NAGKQ9UJ70 344 aa9.29□□□□□ -0.92
SRSF1-204ENST00000581979 HLA-DRB4X5D2U9 266 aa9.29□□□□□ -0.92
SRSF1-204ENST00000581979 IGKV3D-20A0A0C4DH25 116 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 GRIFINA4D1Z8 144 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 KLLNB2CW77 178 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 OR11H12B2RN74 326 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 FRMD6-AS1P0C7T7 363 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 CMC4P56277 68 aaPredicted RBP9.28□□□□□ -0.92
SRSF1-204ENST00000581979 FABP9Q0Z7S8 132 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 KIR3DS1Q14943 382 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 ODF3L2Q3SX64 289 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 Q6ZQT7 251 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 ATP5L2Q7Z4Y8 100 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 C11orf21Q9P2W6 132 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 H3BMM0 161 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 M0R2Z0 102 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 CDKN1BP46527 198 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 SPINK13Q1W4C9 94 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 RASL11AQ6T310 242 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 FER1L6-AS1Q8NA97 138 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 GNB1LQ9BYB4 327 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 SORL1Q92673 2214 aa9.28□□□□□ -0.92
SRSF1-204ENST00000581979 C7orf71A4D174 169 aa9.27□□□□□ -0.93
SRSF1-204ENST00000581979 NHLRC4P0CG21 123 aaPredicted RBP9.27□□□□□ -0.93
SRSF1-204ENST00000581979 CAMPP49913 170 aa9.27□□□□□ -0.93
SRSF1-204ENST00000581979 HBBP68871 147 aa9.27□□□□□ -0.93
SRSF1-204ENST00000581979 LYZL1Q6UWQ5 148 aa9.27□□□□□ -0.93
SRSF1-204ENST00000581979 TMEM136Q6ZRR5 245 aa9.27□□□□□ -0.93
SRSF1-204ENST00000581979 MRPL18Q9H0U6 180 aaKnown RBP9.27□□□□□ -0.93
SRSF1-204ENST00000581979 TENM3Q9P273 2699 aa9.26□□□□□ -0.93
SRSF1-204ENST00000581979 TRAV12-2A0A075B6T6 113 aa9.26□□□□□ -0.93
SRSF1-204ENST00000581979 TRAV12-3A0A0B4J271 114 aa9.26□□□□□ -0.93
SRSF1-204ENST00000581979 A0A1B0GUT8 65 aa9.26□□□□□ -0.93
SRSF1-204ENST00000581979 A0A1B0GXF2 115 aa9.26□□□□□ -0.93
SRSF1-204ENST00000581979 MT-ND6P03923 174 aa9.26□□□□□ -0.93
SRSF1-204ENST00000581979 TRGC1P0CF51 173 aa9.26□□□□□ -0.93
SRSF1-204ENST00000581979 RIGQ13278 110 aa9.26□□□□□ -0.93
SRSF1-204ENST00000581979 MUC21Q5SSG8 566 aa9.26□□□□□ -0.93
SRSF1-204ENST00000581979 GFI1BQ5VTD9 330 aa9.26□□□□□ -0.93
SRSF1-204ENST00000581979 AMTNQ6UX39 209 aa9.26□□□□□ -0.93
SRSF1-204ENST00000581979 A8MTW9 85 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 HLA-DQA1P01909 254 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 S100A6P06703 90 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 ARMS2P0C7Q2 107 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 IGLC6P0CF74 106 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 FXYD7P58549 80 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 STHQ8IWL8 128 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 RBMY1BA6NDE4 496 aaKnown RBP9.25□□□□□ -0.93
SRSF1-204ENST00000581979 RBMY1EA6NEQ0 496 aaKnown RBP9.25□□□□□ -0.93
SRSF1-204ENST00000581979 PHOX2AO14813 284 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 CD7P09564 240 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 RBMY1DP0C7P1 496 aaKnown RBP9.25□□□□□ -0.93
SRSF1-204ENST00000581979 SSTP61278 116 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 ANXA2RQ3ZCQ2 193 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 FAM159AQ6UWV7 190 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 ZNF575Q86XF7 245 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 WWC2-AS2Q96NR7 200 aa9.25□□□□□ -0.93
SRSF1-204ENST00000581979 AGRNO00468 2067 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 A0A1B0GW15 77 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 HIST1H2BKO60814 126 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 S100A8P05109 93 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 HIST1H2BJP06899 126 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 HIST1H2BOP23527 126 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 HIST1H2BBP33778 126 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 CTRLP40313 264 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 HIST1H2BDP58876 126 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 HIST1H2BCP62807 126 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 HIST2H2BEQ16778 126 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.24□□□□□ -0.93
SRSF1-204ENST00000581979 HIST1H2BHQ93079 126 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 HIST1H2BNQ99877 126 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 HIST1H2BMQ99879 126 aa9.24□□□□□ -0.93
SRSF1-204ENST00000581979 MUC21A0A0G2JKD1 596 aa9.23□□□□□ -0.93
SRSF1-204ENST00000581979 MUC21A0A140T8X8 626 aa9.23□□□□□ -0.93
SRSF1-204ENST00000581979 F2Z2F3 143 aa9.23□□□□□ -0.93
SRSF1-204ENST00000581979 ZNF324O75467 553 aaPredicted RBP9.23□□□□□ -0.93
SRSF1-204ENST00000581979 APCSP02743 223 aa9.23□□□□□ -0.93
SRSF1-204ENST00000581979 S100A4P26447 101 aaKnown RBP9.23□□□□□ -0.93
SRSF1-204ENST00000581979 ASIPP42127 132 aa9.23□□□□□ -0.93
SRSF1-204ENST00000581979 KCNS1Q96KK3 526 aa9.23□□□□□ -0.93
SRSF1-204ENST00000581979 FAM110AQ9BQ89 295 aa9.23□□□□□ -0.93
SRSF1-204ENST00000581979 NDUFA6P56556 154 aa9.22□□□□□ -0.93
SRSF1-204ENST00000581979 CLUHP3Q96NS8 147 aa9.22□□□□□ -0.93
SRSF1-204ENST00000581979 SSBP4Q9BWG4 385 aaPredicted RBP9.22□□□□□ -0.93
SRSF1-204ENST00000581979 TIMM8BQ9Y5J9 83 aaPredicted RBP9.22□□□□□ -0.93
SRSF1-204ENST00000581979 U3KQK5 164 aa9.22□□□□□ -0.93
SRSF1-204ENST00000581979 H3BVH4 76 aa9.22□□□□□ -0.93
SRSF1-204ENST00000581979 GNRH2O43555 120 aa9.22□□□□□ -0.93
SRSF1-204ENST00000581979 TWIST1Q15672 202 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms