RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 ZNF546Q86UE3 836 aa4.89□□□□□ -1.63
CDK5RAP3-221ENST00000581662 RAB2BQ8WUD1 216 aa4.89□□□□□ -1.63
CDK5RAP3-221ENST00000581662 MRPL32Q9BYC8 188 aaKnown RBP4.89□□□□□ -1.63
CDK5RAP3-221ENST00000581662 TMEM14CQ9P0S9 112 aa4.89□□□□□ -1.63
CDK5RAP3-221ENST00000581662 ZNF492Q9P255 531 aa4.89□□□□□ -1.63
CDK5RAP3-221ENST00000581662 PXMP4Q9Y6I8 212 aa4.89□□□□□ -1.63
CDK5RAP3-221ENST00000581662 IBA57-AS1B1ANH7 110 aa4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 ANXA7P20073 488 aaKnown RBP4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 TAS2R30P59541 319 aa4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 TDRG1Q3Y452 100 aa4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 LINC01556Q5JQF7 62 aa4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 Q6AWC8 147 aa4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 NRARPQ7Z6K4 114 aa4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 BPIFA4PQ86YQ2 179 aa4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 NRACQ8N912 160 aa4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 ZNF680Q8NEM1 530 aa4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 OR10P1Q8NGE3 313 aa4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 RASL10AQ92737 203 aa4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 FXYD5Q96DB9 178 aa4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 SLC25A21Q9BQT8 299 aaPredicted RBP4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 MRPS26Q9BYN8 205 aaKnown RBP4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 RSL24D1Q9UHA3 163 aaKnown RBP4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 MUC17Q685J3 4493 aa4.88□□□□□ -1.63
CDK5RAP3-221ENST00000581662 TRGV2A0A075B6R0 118 aa4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 IGHV1OR15-1A0A075B7D0 117 aa4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 FAM24AA6NFZ4 105 aa4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 ANXA3P12429 323 aa4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 GATA1P15976 413 aaPredicted RBP4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 RNASE4P34096 147 aaKnown RBP4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 TMBIM6P55061 237 aa4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 TIRAPP58753 221 aa4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 SSTP61278 116 aa4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 SUMO2P61956 95 aaKnown RBP4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 S100A12P80511 92 aa4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 C10orf113Q5VZT2 155 aa4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 NEGR1Q7Z3B1 354 aa4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 MITD1Q8WV92 249 aa4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 HHLA3Q9XRX5 114 aa4.87□□□□□ -1.63
CDK5RAP3-221ENST00000581662 IGHV3-16A0A0C4DH30 117 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 FABP12A6NFH5 140 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 LECT2O14960 151 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 PLA2G10O15496 165 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 MPDU1O75352 247 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 EIF3GO75821 320 aaKnown RBP eCLIP4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 NMBP08949 121 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 RPL29P47914 159 aaKnown RBP4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 ZNF266Q14584 549 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 MRPL23Q16540 153 aaKnown RBP4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 MUC21Q5SSG8 566 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 WDR73Q6P4I2 378 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 MIR17HGQ75NE6 70 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 CCDC28AQ8IWP9 274 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 TOMM5Q8N4H5 51 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 SCGB3A2Q96PL1 93 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 BCL7BQ9BQE9 202 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 GGACTQ9BVM4 153 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 SLC39A9Q9NUM3 307 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 MGAT4CQ9UBM8 478 aa4.86□□□□□ -1.63
CDK5RAP3-221ENST00000581662 A0A087WWL8 130 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 UBE2L5PA0A1B0GUS4 154 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 E5RGE8 158 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 COX7A2P2O60397 106 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 CST7O76096 145 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 HIST1H1EP10412 219 aaKnown RBP4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 CAMLGP49069 296 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 CAV2P51636 162 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 ZNF415Q09FC8 603 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 PDE6HQ13956 83 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 ZNF846Q147U1 533 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 IAH1Q2TAA2 248 aaPredicted RBP4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 UFSP1Q6NVU6 142 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 SLC51BQ86UW2 128 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 MCFD2Q8NI22 146 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 ENKURQ8TC29 256 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 BLNKQ8WV28 456 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 DEDD2Q8WXF8 326 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 LINC00477Q96M19 166 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 Q9HAA7 133 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 USH2AO75445 5202 aa4.85□□□□□ -1.63
CDK5RAP3-221ENST00000581662 TRAV4A0A0B4J268 109 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 IGHV3-38A0A0C4DH36 116 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 A0A0D9SG52 128 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 TRBV7-9A0A0J9YWB2 115 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 RBFOX3A6NFN3 312 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 GOSR2O14653 212 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 GNRH2O43555 120 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 SCGB1D2O95969 90 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 TYMSP04818 313 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 ZNF80P51504 273 aaPredicted RBP4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 RPP30P78346 268 aaKnown RBP4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 RAB32Q13637 225 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 GUK1Q16774 197 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 FAM122CQ6P4D5 195 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 TMEM252Q8N6L7 170 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 SEC22CQ9BRL7 303 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 NPCDR1Q9BY65 106 aa4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 LYRM2Q9NU23 88 aaPredicted RBP4.84□□□□□ -1.63
CDK5RAP3-221ENST00000581662 OR10J4P0C629 311 aa4.83□□□□□ -1.64
CDK5RAP3-221ENST00000581662 SRIP30626 198 aa4.83□□□□□ -1.64
CDK5RAP3-221ENST00000581662 PYDC2Q56P42 97 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms