RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 GATCO43716 136 aaKnown RBP17.59■□□□□ 0.41
ATPAF1-213ENST00000574428 CA1P00915 261 aaPredicted RBP17.59■□□□□ 0.41
ATPAF1-213ENST00000574428 GIG44P09565 113 aaPredicted RBP17.59■□□□□ 0.41
ATPAF1-213ENST00000574428 RBMY1A1P0DJD3 496 aaKnown RBP17.59■□□□□ 0.41
ATPAF1-213ENST00000574428 RBMY1CP0DJD4 496 aa17.59■□□□□ 0.41
ATPAF1-213ENST00000574428 RBMY1FQ15415 496 aaKnown RBP17.59■□□□□ 0.41
ATPAF1-213ENST00000574428 RPP21Q9H633 154 aaKnown RBP17.59■□□□□ 0.41
ATPAF1-213ENST00000574428 NAGKQ9UJ70 344 aa17.59■□□□□ 0.41
ATPAF1-213ENST00000574428 DNHD1Q96M86 4753 aa17.59■□□□□ 0.41
ATPAF1-213ENST00000574428 NBEAL1Q6ZS30 2694 aa17.59■□□□□ 0.41
ATPAF1-213ENST00000574428 ZNF324O75467 553 aaPredicted RBP17.58■□□□□ 0.41
ATPAF1-213ENST00000574428 ORM1P02763 201 aa17.58■□□□□ 0.41
ATPAF1-213ENST00000574428 FRZBQ92765 325 aa17.58■□□□□ 0.41
ATPAF1-213ENST00000574428 DNAH3Q8TD57 4116 aa17.58■□□□□ 0.41
ATPAF1-213ENST00000574428 TMSB15BA0A087X1C1 80 aa17.58■□□□□ 0.4
ATPAF1-213ENST00000574428 INSP01308 110 aa17.58■□□□□ 0.4
ATPAF1-213ENST00000574428 AMBPP02760 352 aa17.58■□□□□ 0.4
ATPAF1-213ENST00000574428 PRB2P02812 416 aaPredicted RBP17.58■□□□□ 0.4
ATPAF1-213ENST00000574428 S100A6P06703 90 aa17.58■□□□□ 0.4
ATPAF1-213ENST00000574428 MUC21Q5SSG8 566 aa17.58■□□□□ 0.4
ATPAF1-213ENST00000574428 KPRPQ5T749 579 aaPredicted RBP17.58■□□□□ 0.4
ATPAF1-213ENST00000574428 MORN3Q6PF18 240 aaPredicted RBP17.58■□□□□ 0.4
ATPAF1-213ENST00000574428 OR2D3Q8NGH3 330 aa17.58■□□□□ 0.4
ATPAF1-213ENST00000574428 LOC102724200A0A096LPH7 203 aaPredicted RBP17.57■□□□□ 0.4
ATPAF1-213ENST00000574428 HIST1H2BKO60814 126 aa17.57■□□□□ 0.4
ATPAF1-213ENST00000574428 HIST1H2BJP06899 126 aa17.57■□□□□ 0.4
ATPAF1-213ENST00000574428 HIST1H2BOP23527 126 aa17.57■□□□□ 0.4
ATPAF1-213ENST00000574428 HIST1H2BBP33778 126 aa17.57■□□□□ 0.4
ATPAF1-213ENST00000574428 HIST1H2BDP58876 126 aa17.57■□□□□ 0.4
ATPAF1-213ENST00000574428 SNRPEP62304 92 aaKnown RBP17.57■□□□□ 0.4
ATPAF1-213ENST00000574428 HIST1H2BCP62807 126 aa17.57■□□□□ 0.4
ATPAF1-213ENST00000574428 HIST2H2BEQ16778 126 aa17.57■□□□□ 0.4
ATPAF1-213ENST00000574428 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.57■□□□□ 0.4
ATPAF1-213ENST00000574428 HIST1H2BHQ93079 126 aa17.57■□□□□ 0.4
ATPAF1-213ENST00000574428 HIST1H2BNQ99877 126 aa17.57■□□□□ 0.4
ATPAF1-213ENST00000574428 HIST1H2BMQ99879 126 aa17.57■□□□□ 0.4
ATPAF1-213ENST00000574428 IGKV3D-20A0A0C4DH25 116 aa17.56■□□□□ 0.4
ATPAF1-213ENST00000574428 SMIM27A0A1W2PRY6 76 aa17.56■□□□□ 0.4
ATPAF1-213ENST00000574428 TMEM189A5PLL7 270 aa17.56■□□□□ 0.4
ATPAF1-213ENST00000574428 C5orf52A6NGY3 159 aa17.56■□□□□ 0.4
ATPAF1-213ENST00000574428 TRGC1P0CF51 173 aa17.56■□□□□ 0.4
ATPAF1-213ENST00000574428 CSTL1Q9H114 145 aa17.56■□□□□ 0.4
ATPAF1-213ENST00000574428 GZMBP10144 247 aa17.55■□□□□ 0.4
ATPAF1-213ENST00000574428 TCL1AP56279 114 aa17.55■□□□□ 0.4
ATPAF1-213ENST00000574428 LINC01559Q495D7 138 aa17.55■□□□□ 0.4
ATPAF1-213ENST00000574428 ANXA2RQ3ZCQ2 193 aa17.53■□□□□ 0.4
ATPAF1-213ENST00000574428 ZNF575Q86XF7 245 aa17.53■□□□□ 0.4
ATPAF1-213ENST00000574428 C1QTNF4Q9BXJ3 329 aa17.53■□□□□ 0.4
ATPAF1-213ENST00000574428 GRIFINA4D1Z8 144 aa17.52■□□□□ 0.4
ATPAF1-213ENST00000574428 CT83Q5H943 113 aa17.52■□□□□ 0.4
ATPAF1-213ENST00000574428 FAM159AQ6UWV7 190 aa17.52■□□□□ 0.4
ATPAF1-213ENST00000574428 C1orf158Q8N1D5 194 aa17.51■□□□□ 0.39
ATPAF1-213ENST00000574428 IGHV3OR16-12A0A075B7B8 117 aa17.51■□□□□ 0.39
ATPAF1-213ENST00000574428 UBE2CO00762 179 aa17.51■□□□□ 0.39
ATPAF1-213ENST00000574428 APOC4P55056 127 aa17.51■□□□□ 0.39
ATPAF1-213ENST00000574428 NDUFA6P56556 154 aa17.51■□□□□ 0.39
ATPAF1-213ENST00000574428 FABP9Q0Z7S8 132 aa17.51■□□□□ 0.39
ATPAF1-213ENST00000574428 CSNK1G2-AS1Q8NCQ2 148 aa17.51■□□□□ 0.39
ATPAF1-213ENST00000574428 C20orf144Q9BQM9 153 aa17.51■□□□□ 0.39
ATPAF1-213ENST00000574428 TMEM208Q9BTX3 173 aa17.51■□□□□ 0.39
ATPAF1-213ENST00000574428 KIR2DL5BA0A0G2JN68 375 aa17.5■□□□□ 0.39
ATPAF1-213ENST00000574428 KIR2DL5BA0A0G2JPC4 375 aa17.5■□□□□ 0.39
ATPAF1-213ENST00000574428 A8MWL6 223 aa17.5■□□□□ 0.39
ATPAF1-213ENST00000574428 HTN1P15515 57 aa17.5■□□□□ 0.39
ATPAF1-213ENST00000574428 KIR2DL5AQ8N109 375 aa17.5■□□□□ 0.39
ATPAF1-213ENST00000574428 KIR2DL5BQ8NHK3 375 aa17.5■□□□□ 0.39
ATPAF1-213ENST00000574428 TSKUQ8WUA8 353 aa17.5■□□□□ 0.39
ATPAF1-213ENST00000574428 LINC01587Q99440 93 aa17.5■□□□□ 0.39
ATPAF1-213ENST00000574428 TRAPPC1Q9Y5R8 145 aa17.5■□□□□ 0.39
ATPAF1-213ENST00000574428 IGHV1OR15-1A0A075B7D0 117 aa17.49■□□□□ 0.39
ATPAF1-213ENST00000574428 A8MZ25 164 aa17.49■□□□□ 0.39
ATPAF1-213ENST00000574428 SPINK4O60575 86 aa17.49■□□□□ 0.39
ATPAF1-213ENST00000574428 PRM2P04554 102 aa17.49■□□□□ 0.39
ATPAF1-213ENST00000574428 FRMD6-AS1P0C7T7 363 aa17.49■□□□□ 0.39
ATPAF1-213ENST00000574428 GTSF1Q8WW33 167 aa17.49■□□□□ 0.39
ATPAF1-213ENST00000574428 TP53TG3Q9ULZ0 132 aa17.49■□□□□ 0.39
ATPAF1-213ENST00000574428 GNRH2O43555 120 aa17.48■□□□□ 0.39
ATPAF1-213ENST00000574428 RPS20P60866 119 aaKnown RBP17.48■□□□□ 0.39
ATPAF1-213ENST00000574428 NEU1Q99519 415 aa17.48■□□□□ 0.39
ATPAF1-213ENST00000574428 XKRY2A2RUG3 117 aa17.48■□□□□ 0.39
ATPAF1-213ENST00000574428 K7EIL1 84 aa17.48■□□□□ 0.39
ATPAF1-213ENST00000574428 TDRG1Q3Y452 100 aa17.48■□□□□ 0.39
ATPAF1-213ENST00000574428 GOLT1BQ9Y3E0 138 aa17.48■□□□□ 0.39
ATPAF1-213ENST00000574428 KCNS1Q96KK3 526 aa17.47■□□□□ 0.39
ATPAF1-213ENST00000574428 TPPP3Q9BW30 176 aa17.47■□□□□ 0.39
ATPAF1-213ENST00000574428 TMEM256Q8N2U0 113 aa17.46■□□□□ 0.39
ATPAF1-213ENST00000574428 NUP35Q8NFH5 326 aa17.46■□□□□ 0.39
ATPAF1-213ENST00000574428 NAT8BQ9UHF3 227 aa17.46■□□□□ 0.39
ATPAF1-213ENST00000574428 CBY3A6NI87 242 aa17.45■□□□□ 0.38
ATPAF1-213ENST00000574428 MRPL54Q6P161 138 aaKnown RBP17.45■□□□□ 0.38
ATPAF1-213ENST00000574428 HIGD1CA8MV81 97 aa17.45■□□□□ 0.38
ATPAF1-213ENST00000574428 DEFB135Q30KP9 77 aa17.45■□□□□ 0.38
ATPAF1-213ENST00000574428 GFRA4Q9GZZ7 299 aa17.45■□□□□ 0.38
ATPAF1-213ENST00000574428 HOXA5P20719 270 aa17.44■□□□□ 0.38
ATPAF1-213ENST00000574428 TIMM8BQ9Y5J9 83 aaPredicted RBP17.44■□□□□ 0.38
ATPAF1-213ENST00000574428 SNURFLB1AK76 121 aa17.43■□□□□ 0.38
ATPAF1-213ENST00000574428 ASIPP42127 132 aa17.43■□□□□ 0.38
ATPAF1-213ENST00000574428 ZNF705AQ6ZN79 300 aaPredicted RBP17.43■□□□□ 0.38
ATPAF1-213ENST00000574428 PGLYRP4Q96LB8 373 aa17.43■□□□□ 0.38
ATPAF1-213ENST00000574428 GNB1LQ9BYB4 327 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms