RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	PPP1R2P9	O14990	202 aa		10.38	□□□□□ -0.75
ABR-223	ENST00000573895	MT-ND4L	P03901	98 aa		10.38	□□□□□ -0.75
ABR-223	ENST00000573895	PFN1	P07737	140 aa	Known RBP	10.38	□□□□□ -0.75
ABR-223	ENST00000573895	RNASE4	P34096	147 aa	Known RBP	10.38	□□□□□ -0.75
ABR-223	ENST00000573895		Q6AWC8	147 aa		10.38	□□□□□ -0.75
ABR-223	ENST00000573895	CLRN3	Q8NCR9	226 aa		10.38	□□□□□ -0.75
ABR-223	ENST00000573895	C20orf144	Q9BQM9	153 aa		10.38	□□□□□ -0.75
ABR-223	ENST00000573895	OSTC	Q9NRP0	149 aa		10.38	□□□□□ -0.75
ABR-223	ENST00000573895	IGHV4-28	A0A0C4DH34	117 aa		10.37	□□□□□ -0.75
ABR-223	ENST00000573895	C7orf71	A4D174	169 aa		10.37	□□□□□ -0.75
ABR-223	ENST00000573895	C19orf71	A6NCJ1	209 aa		10.37	□□□□□ -0.75
ABR-223	ENST00000573895	CRIP1	P50238	77 aa		10.37	□□□□□ -0.75
ABR-223	ENST00000573895	ERVFC1-1	P60608	527 aa		10.37	□□□□□ -0.75
ABR-223	ENST00000573895	OR5I1	Q13606	314 aa		10.37	□□□□□ -0.75
ABR-223	ENST00000573895	RHEB	Q15382	184 aa		10.37	□□□□□ -0.75
ABR-223	ENST00000573895	SPINK13	Q1W4C9	94 aa		10.37	□□□□□ -0.75
ABR-223	ENST00000573895	C15orf54	Q8N8G6	183 aa		10.37	□□□□□ -0.75
ABR-223	ENST00000573895	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.37	□□□□□ -0.75
ABR-223	ENST00000573895	ANAPC16	Q96DE5	110 aa		10.37	□□□□□ -0.75
ABR-223	ENST00000573895	SFRP2	Q96HF1	295 aa		10.37	□□□□□ -0.75
ABR-223	ENST00000573895	NEU1	Q99519	415 aa		10.37	□□□□□ -0.75
ABR-223	ENST00000573895	XCL2	Q9UBD3	114 aa		10.37	□□□□□ -0.75
ABR-223	ENST00000573895		M0R2Z0	102 aa		10.36	□□□□□ -0.75
ABR-223	ENST00000573895	RBMY1A1	P0DJD3	496 aa	Known RBP	10.36	□□□□□ -0.75
ABR-223	ENST00000573895	RBMY1C	P0DJD4	496 aa		10.36	□□□□□ -0.75
ABR-223	ENST00000573895	ZNF80	P51504	273 aa	Predicted RBP	10.36	□□□□□ -0.75
ABR-223	ENST00000573895	RBMY1F	Q15415	496 aa	Known RBP	10.36	□□□□□ -0.75
ABR-223	ENST00000573895	IBA57	Q5T440	356 aa	Known RBP	10.36	□□□□□ -0.75
ABR-223	ENST00000573895	PRR27	Q6MZM9	219 aa		10.36	□□□□□ -0.75
ABR-223	ENST00000573895	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.36	□□□□□ -0.75
ABR-223	ENST00000573895	NUDT10	Q8NFP7	164 aa		10.36	□□□□□ -0.75
ABR-223	ENST00000573895	OR10G8	Q8NGN5	311 aa		10.36	□□□□□ -0.75
ABR-223	ENST00000573895	NUDT11	Q96G61	164 aa		10.36	□□□□□ -0.75
ABR-223	ENST00000573895	CTDSP1	Q9GZU7	261 aa		10.36	□□□□□ -0.75
ABR-223	ENST00000573895		A0A087WWC5	75 aa		10.35	□□□□□ -0.75
ABR-223	ENST00000573895	C7orf77	A4D0Y5	90 aa		10.35	□□□□□ -0.75
ABR-223	ENST00000573895	SMIM9	A6NGZ8	99 aa		10.35	□□□□□ -0.75
ABR-223	ENST00000573895	SH2D1A	O60880	128 aa		10.35	□□□□□ -0.75
ABR-223	ENST00000573895	ZNF324	O75467	553 aa	Predicted RBP	10.35	□□□□□ -0.75
ABR-223	ENST00000573895		P01737	135 aa		10.35	□□□□□ -0.75
ABR-223	ENST00000573895	GFI1B	Q5VTD9	330 aa		10.35	□□□□□ -0.75
ABR-223	ENST00000573895	TMEM256	Q8N2U0	113 aa		10.35	□□□□□ -0.75
ABR-223	ENST00000573895	TMEM242	Q9NWH2	141 aa		10.35	□□□□□ -0.75
ABR-223	ENST00000573895	XKRY2	A2RUG3	117 aa		10.34	□□□□□ -0.75
ABR-223	ENST00000573895		J3KRW8	73 aa		10.34	□□□□□ -0.75
ABR-223	ENST00000573895	DEFB4A	O15263	64 aa		10.34	□□□□□ -0.75
ABR-223	ENST00000573895	CRX	O43186	299 aa	Predicted RBP	10.34	□□□□□ -0.75
ABR-223	ENST00000573895	GATC	O43716	136 aa	Known RBP	10.34	□□□□□ -0.75
ABR-223	ENST00000573895	INS	P01308	110 aa		10.34	□□□□□ -0.75
ABR-223	ENST00000573895	FXYD7	P58549	80 aa		10.34	□□□□□ -0.75
ABR-223	ENST00000573895	NANOS2	P60321	138 aa	Known RBP	10.34	□□□□□ -0.75
ABR-223	ENST00000573895	RPS20	P60866	119 aa	Known RBP	10.34	□□□□□ -0.75
ABR-223	ENST00000573895	BTN1A1	Q13410	526 aa		10.34	□□□□□ -0.75
ABR-223	ENST00000573895	TRAV12-2	A0A075B6T6	113 aa		10.33	□□□□□ -0.76
ABR-223	ENST00000573895	TRAV12-3	A0A0B4J271	114 aa		10.33	□□□□□ -0.76
ABR-223	ENST00000573895	ORM1	P02763	201 aa		10.33	□□□□□ -0.76
ABR-223	ENST00000573895	TCTA	P57738	103 aa		10.33	□□□□□ -0.76
ABR-223	ENST00000573895	KIR3DS1	Q14943	382 aa		10.33	□□□□□ -0.76
ABR-223	ENST00000573895	RNF212	Q495C1	297 aa		10.33	□□□□□ -0.76
ABR-223	ENST00000573895	CT83	Q5H943	113 aa		10.33	□□□□□ -0.76
ABR-223	ENST00000573895	PRR9	Q5T870	116 aa		10.33	□□□□□ -0.76
ABR-223	ENST00000573895	LINC00476	Q8WZB0	136 aa		10.33	□□□□□ -0.76
ABR-223	ENST00000573895	KCNS1	Q96KK3	526 aa		10.33	□□□□□ -0.76
ABR-223	ENST00000573895	RNASE7	Q9H1E1	156 aa	Known RBP	10.33	□□□□□ -0.76
ABR-223	ENST00000573895	TMEM189	A5PLL7	270 aa		10.32	□□□□□ -0.76
ABR-223	ENST00000573895	ZNF705G	A8MUZ8	300 aa	Predicted RBP	10.32	□□□□□ -0.76
ABR-223	ENST00000573895		A8MWL6	223 aa		10.32	□□□□□ -0.76
ABR-223	ENST00000573895		H7BYZ3	331 aa		10.32	□□□□□ -0.76
ABR-223	ENST00000573895	LINC01559	Q495D7	138 aa		10.32	□□□□□ -0.76
ABR-223	ENST00000573895	FAM159A	Q6UWV7	190 aa		10.32	□□□□□ -0.76
ABR-223	ENST00000573895	PYGO2	Q9BRQ0	406 aa		10.32	□□□□□ -0.76
ABR-223	ENST00000573895	LINC00467	Q9BRT7	94 aa		10.32	□□□□□ -0.76
ABR-223	ENST00000573895	RPP21	Q9H633	154 aa	Known RBP	10.32	□□□□□ -0.76
ABR-223	ENST00000573895	RPS10P5	Q9NQ39	176 aa		10.32	□□□□□ -0.76
ABR-223	ENST00000573895	GOLT1B	Q9Y3E0	138 aa		10.32	□□□□□ -0.76
ABR-223	ENST00000573895	HYDIN	Q4G0P3	5121 aa		10.31	□□□□□ -0.76
ABR-223	ENST00000573895	FAM231B	A6NCW3	169 aa		10.31	□□□□□ -0.76
ABR-223	ENST00000573895	CXCL1	P09341	107 aa		10.31	□□□□□ -0.76
ABR-223	ENST00000573895	TDRG1	Q3Y452	100 aa		10.31	□□□□□ -0.76
ABR-223	ENST00000573895	OR2D3	Q8NGH3	330 aa		10.31	□□□□□ -0.76
ABR-223	ENST00000573895	IMMP2L	Q96T52	175 aa		10.31	□□□□□ -0.76
ABR-223	ENST00000573895		V9GYV3	84 aa		10.31	□□□□□ -0.76
ABR-223	ENST00000573895	IGHV1OR15-1	A0A075B7D0	117 aa		10.3	□□□□□ -0.76
ABR-223	ENST00000573895	LINC01587	Q99440	93 aa		10.3	□□□□□ -0.76
ABR-223	ENST00000573895	GFRA4	Q9GZZ7	299 aa		10.3	□□□□□ -0.76
ABR-223	ENST00000573895	IGKV3D-20	A0A0C4DH25	116 aa		10.29	□□□□□ -0.76
ABR-223	ENST00000573895	ANXA2R	Q3ZCQ2	193 aa		10.29	□□□□□ -0.76
ABR-223	ENST00000573895	DNLZ	Q5SXM8	178 aa		10.29	□□□□□ -0.76
ABR-223	ENST00000573895	C1orf158	Q8N1D5	194 aa		10.29	□□□□□ -0.76
ABR-223	ENST00000573895	TSKU	Q8WUA8	353 aa		10.29	□□□□□ -0.76
ABR-223	ENST00000573895	TMEM208	Q9BTX3	173 aa		10.29	□□□□□ -0.76
ABR-223	ENST00000573895	C11orf21	Q9P2W6	132 aa		10.29	□□□□□ -0.76
ABR-223	ENST00000573895	TRAV10	A0A0B4J240	114 aa		10.28	□□□□□ -0.76
ABR-223	ENST00000573895	TEX48	A0A1B0GUV7	120 aa		10.28	□□□□□ -0.76
ABR-223	ENST00000573895	FOXA3	P55318	350 aa	Predicted RBP	10.28	□□□□□ -0.76
ABR-223	ENST00000573895	ATRAID	Q6UW56	229 aa		10.28	□□□□□ -0.76
ABR-223	ENST00000573895		Q6ZQT7	251 aa		10.28	□□□□□ -0.76
ABR-223	ENST00000573895	IL36B	Q9NZH7	164 aa		10.28	□□□□□ -0.76
ABR-223	ENST00000573895	NAGK	Q9UJ70	344 aa		10.28	□□□□□ -0.76
ABR-223	ENST00000573895	TRGV11	A0A075B6L2	103 aa		10.27	□□□□□ -0.77

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