RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 IFITM10A6NMD0 228 aa5.29□□□□□ -1.56
SMG1-215ENST00000568239 F2Z2F3 143 aa5.29□□□□□ -1.56
SMG1-215ENST00000568239 CSN3P07498 182 aa5.29□□□□□ -1.56
SMG1-215ENST00000568239 CD300EQ496F6 205 aaPredicted RBP5.29□□□□□ -1.56
SMG1-215ENST00000568239 ZFAND2AQ8N6M9 145 aa5.29□□□□□ -1.56
SMG1-215ENST00000568239 OR10D4PQ8NGN7 298 aa5.29□□□□□ -1.56
SMG1-215ENST00000568239 NTF3P20783 257 aa5.29□□□□□ -1.56
SMG1-215ENST00000568239 PROK1P58294 105 aa5.29□□□□□ -1.56
SMG1-215ENST00000568239 DEFB131AP59861 70 aa5.29□□□□□ -1.56
SMG1-215ENST00000568239 LENEPQ9Y5L5 61 aa5.29□□□□□ -1.56
SMG1-215ENST00000568239 ATRQ13535 2644 aa5.29□□□□□ -1.56
SMG1-215ENST00000568239 TRAV12-2A0A075B6T6 113 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 TRAV21A0A0B4J279 112 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 M0R2Z0 102 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 NUPR1O60356 82 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 SERF1AO75920 110 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 NDUFA7O95182 113 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 S100A4P26447 101 aaKnown RBP5.28□□□□□ -1.56
SMG1-215ENST00000568239 IQCJQ1A5X6 159 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 KNCNA6PVL3 124 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 CRLF1O75462 422 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 S100A8P05109 93 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 ZNF124Q15973 351 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 DEFB114Q30KQ6 69 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 PACRGQ96M98 296 aaPredicted RBP5.28□□□□□ -1.56
SMG1-215ENST00000568239 C12orf57Q99622 126 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 HIST1H2BLQ99880 126 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 TRAV12-3A0A0B4J271 114 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 A0A0J9YX75 114 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 H3BVH4 76 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 SPRY2O43597 315 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 SAP30O75446 220 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 FXYD7P58549 80 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 FHL3Q13643 280 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 SPINK13Q1W4C9 94 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 COA6Q5JTJ3 125 aaKnown RBP5.28□□□□□ -1.56
SMG1-215ENST00000568239 SAMD10Q9BYL1 202 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 MSRB1Q9NZV6 116 aa5.28□□□□□ -1.56
SMG1-215ENST00000568239 AMBPP02760 352 aa5.27□□□□□ -1.57
SMG1-215ENST00000568239 ANXA2RQ3ZCQ2 193 aa5.27□□□□□ -1.57
SMG1-215ENST00000568239 SPANXN1Q5VSR9 72 aa5.27□□□□□ -1.57
SMG1-215ENST00000568239 ZNF575Q86XF7 245 aa5.27□□□□□ -1.57
SMG1-215ENST00000568239 TMEM18Q96B42 140 aa5.27□□□□□ -1.57
SMG1-215ENST00000568239 TP53TG3Q9ULZ0 132 aa5.27□□□□□ -1.57
SMG1-215ENST00000568239 IGLC6P0CF74 106 aa5.27□□□□□ -1.57
SMG1-215ENST00000568239 APRG1Q8IVJ8 170 aa5.27□□□□□ -1.57
SMG1-215ENST00000568239 AMN1Q8IY45 258 aa5.27□□□□□ -1.57
SMG1-215ENST00000568239 LINC00518Q8N0U6 118 aa5.27□□□□□ -1.57
SMG1-215ENST00000568239 OR10AG1Q8NH19 301 aa5.27□□□□□ -1.57
SMG1-215ENST00000568239 RCHY1Q96PM5 261 aa5.27□□□□□ -1.57
SMG1-215ENST00000568239 ALKBH7Q9BT30 221 aaPredicted RBP5.27□□□□□ -1.57
SMG1-215ENST00000568239 LOC102724200A0A096LPH7 203 aaPredicted RBP5.26□□□□□ -1.57
SMG1-215ENST00000568239 A0A1B0GW15 77 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 OR4C46A6NHA9 309 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 GNRH2O43555 120 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 PF4P02776 101 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 HTN1P15515 57 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 Q0VG73 95 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 OR10J3Q5JRS4 329 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 FAM159AQ6UWV7 190 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 FOXI2Q6ZQN5 318 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 C18orf32Q8TCD1 76 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 FAM19A4Q96LR4 140 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 M0R381 172 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 DUSP14O95147 198 aaKnown RBP5.26□□□□□ -1.57
SMG1-215ENST00000568239 PMCHP20382 165 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 CTRLP40313 264 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 LEPP41159 167 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 CDKN1BP46527 198 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 KRTAP10-3P60369 221 aa5.26□□□□□ -1.57
SMG1-215ENST00000568239 RNASEKQ6P5S7 137 aaKnown RBP5.26□□□□□ -1.57
SMG1-215ENST00000568239 PCP4L1A6NKN8 68 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 ASIPP42127 132 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 SPAG8Q99932 426 aaPredicted RBP5.25□□□□□ -1.57
SMG1-215ENST00000568239 MAP6D1Q9H9H5 199 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 PHLDA3Q9Y5J5 127 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 TRBV7-9A0A0J9YWB2 115 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 C7orf71A4D174 169 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 ADARB2-AS1A8MUL3 147 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 KLLNB2CW77 178 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 D6R8Y8 96 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 HSBP1O75506 76 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 CD7P09564 240 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 TSPOP30536 169 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 PCP4P48539 62 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 AMTP48728 403 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 LINC00310P59036 64 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 COTL1Q14019 142 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 FAM19A2Q8N3H0 131 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 EVI2AP22794 236 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 PYY3Q5JQD4 70 aa5.25□□□□□ -1.57
SMG1-215ENST00000568239 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.25□□□□□ -1.57
SMG1-215ENST00000568239 TENM1Q9UKZ4 2725 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 LOC389332A0A1B0GUA5 103 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 SMKR1H3BMG3 65 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 NCR2O95944 276 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 SMIM6P0DI80 62 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 CKS2P33552 79 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 FAM104BQ5XKR9 115 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 SMIM15Q7Z3B0 74 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms