RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 RBMY1EA6NEQ0 496 aaKnown RBP9.5□□□□□ -0.89
SPG7-209ENST00000564047 RBMY1DP0C7P1 496 aaKnown RBP9.5□□□□□ -0.89
SPG7-209ENST00000564047 TSPOP30536 169 aa9.5□□□□□ -0.89
SPG7-209ENST00000564047 LEPP41159 167 aa9.5□□□□□ -0.89
SPG7-209ENST00000564047 OR5I1Q13606 314 aa9.5□□□□□ -0.89
SPG7-209ENST00000564047 GNB1LQ9BYB4 327 aa9.5□□□□□ -0.89
SPG7-209ENST00000564047 NIT2Q9NQR4 276 aa9.5□□□□□ -0.89
SPG7-209ENST00000564047 DNAH3Q8TD57 4116 aa9.49□□□□□ -0.89
SPG7-209ENST00000564047 GATCO43716 136 aaKnown RBP9.49□□□□□ -0.89
SPG7-209ENST00000564047 MGST1P10620 155 aaKnown RBP9.49□□□□□ -0.89
SPG7-209ENST00000564047 NUTF2P61970 127 aaKnown RBP9.49□□□□□ -0.89
SPG7-209ENST00000564047 GFI1BQ5VTD9 330 aa9.49□□□□□ -0.89
SPG7-209ENST00000564047 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
SPG7-209ENST00000564047 ZFAND2AQ8N6M9 145 aa9.49□□□□□ -0.89
SPG7-209ENST00000564047 OR10D4PQ8NGN7 298 aa9.49□□□□□ -0.89
SPG7-209ENST00000564047 MRAPQ8TCY5 172 aa9.49□□□□□ -0.89
SPG7-209ENST00000564047 HIST1H2BLQ99880 126 aa9.49□□□□□ -0.89
SPG7-209ENST00000564047 ASCL2Q99929 193 aa9.49□□□□□ -0.89
SPG7-209ENST00000564047 NOTCH3Q9UM47 2321 aa9.49□□□□□ -0.89
SPG7-209ENST00000564047 KLLNB2CW77 178 aa9.48□□□□□ -0.89
SPG7-209ENST00000564047 AMBPP02760 352 aa9.48□□□□□ -0.89
SPG7-209ENST00000564047 CDKN1BP46527 198 aa9.48□□□□□ -0.89
SPG7-209ENST00000564047 CT83Q5H943 113 aa9.48□□□□□ -0.89
SPG7-209ENST00000564047 MORN3Q6PF18 240 aaPredicted RBP9.48□□□□□ -0.89
SPG7-209ENST00000564047 NHLRC2Q8NBF2 726 aa9.48□□□□□ -0.89
SPG7-209ENST00000564047 C8orf49Q96NF6 230 aa9.48□□□□□ -0.89
SPG7-209ENST00000564047 RNASE7Q9H1E1 156 aaKnown RBP9.48□□□□□ -0.89
SPG7-209ENST00000564047 LOC102724200A0A096LPH7 203 aaPredicted RBP9.47□□□□□ -0.89
SPG7-209ENST00000564047 PCP4L1A6NKN8 68 aa9.47□□□□□ -0.89
SPG7-209ENST00000564047 ZNF705GA8MUZ8 300 aaPredicted RBP9.47□□□□□ -0.89
SPG7-209ENST00000564047 A8MZ25 164 aa9.47□□□□□ -0.89
SPG7-209ENST00000564047 PRB2P02812 416 aaPredicted RBP9.47□□□□□ -0.89
SPG7-209ENST00000564047 GPX1P07203 203 aa9.47□□□□□ -0.89
SPG7-209ENST00000564047 IGHV4-30-4P0DP06 118 aa9.47□□□□□ -0.89
SPG7-209ENST00000564047 FABP4P15090 132 aa9.47□□□□□ -0.89
SPG7-209ENST00000564047 SPINK13Q1W4C9 94 aa9.47□□□□□ -0.89
SPG7-209ENST00000564047 PYY3Q5JQD4 70 aa9.47□□□□□ -0.89
SPG7-209ENST00000564047 TMEM18Q96B42 140 aa9.47□□□□□ -0.89
SPG7-209ENST00000564047 ZC2HC1AQ96GY0 325 aa9.47□□□□□ -0.89
SPG7-209ENST00000564047 PACRGQ96M98 296 aaPredicted RBP9.47□□□□□ -0.89
SPG7-209ENST00000564047 MRPL18Q9H0U6 180 aaKnown RBP9.47□□□□□ -0.89
SPG7-209ENST00000564047 M0R2Z0 102 aa9.46□□□□□ -0.9
SPG7-209ENST00000564047 HLA-DQA1P01909 254 aa9.46□□□□□ -0.9
SPG7-209ENST00000564047 RPL35AP18077 110 aaKnown RBP9.46□□□□□ -0.9
SPG7-209ENST00000564047 KIR2DL5BA0A0G2JN68 375 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 KIR2DL5BA0A0G2JPC4 375 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 C7orf71A4D174 169 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 SNURFLB1AK76 121 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 J3KRW8 73 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 CRXO43186 299 aaPredicted RBP9.45□□□□□ -0.9
SPG7-209ENST00000564047 ESDP10768 282 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 RNASE4P34096 147 aaKnown RBP9.45□□□□□ -0.9
SPG7-209ENST00000564047 CRIP1P50238 77 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 ZNF80P51504 273 aaPredicted RBP9.45□□□□□ -0.9
SPG7-209ENST00000564047 FXYD7P58549 80 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 KIR3DS1Q14943 382 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 PDZD11Q5EBL8 140 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 PRR9Q5T870 116 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 Q6AWC8 147 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 LINC00322Q6ZN03 302 aaPredicted RBP9.45□□□□□ -0.9
SPG7-209ENST00000564047 TMEM136Q6ZRR5 245 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 KIR2DL5AQ8N109 375 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 NUDT10Q8NFP7 164 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 KIR2DL5BQ8NHK3 375 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 TSKUQ8WUA8 353 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 NUDT11Q96G61 164 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 C1QTNF4Q9BXJ3 329 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 CSTL1Q9H114 145 aa9.45□□□□□ -0.9
SPG7-209ENST00000564047 SORL1Q92673 2214 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 TRAV12-2A0A075B6T6 113 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 TRAV21A0A0B4J279 112 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 C19orf71A6NCJ1 209 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 FAM231BA6NCW3 169 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 FABP5P3A8MUU1 101 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 APOC4P55056 127 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 Q0VG73 95 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 JOSD1Q15040 202 aaPredicted RBP9.44□□□□□ -0.9
SPG7-209ENST00000564047 FAM162BQ5T6X4 162 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 PRR27Q6MZM9 219 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 ATP5L2Q7Z4Y8 100 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 C20orf144Q9BQM9 153 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 GSN-AS1Q9NRJ2 163 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 NAT8BQ9UHF3 227 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 DNAH9Q9NYC9 4486 aa9.44□□□□□ -0.9
SPG7-209ENST00000564047 SH2D1AO60880 128 aa9.43□□□□□ -0.9
SPG7-209ENST00000564047 ZNF324O75467 553 aaPredicted RBP9.43□□□□□ -0.9
SPG7-209ENST00000564047 INSP01308 110 aa9.43□□□□□ -0.9
SPG7-209ENST00000564047 GIG44P09565 113 aaPredicted RBP9.43□□□□□ -0.9
SPG7-209ENST00000564047 DAZAP1Q96EP5 407 aaKnown RBP9.43□□□□□ -0.9
SPG7-209ENST00000564047 GFRA4Q9GZZ7 299 aa9.43□□□□□ -0.9
SPG7-209ENST00000564047 RPP21Q9H633 154 aaKnown RBP9.43□□□□□ -0.9
SPG7-209ENST00000564047 TRAV12-3A0A0B4J271 114 aa9.42□□□□□ -0.9
SPG7-209ENST00000564047 A8MWL6 223 aa9.42□□□□□ -0.9
SPG7-209ENST00000564047 CA1P00915 261 aaPredicted RBP9.42□□□□□ -0.9
SPG7-209ENST00000564047 OR10J3Q5JRS4 329 aa9.42□□□□□ -0.9
SPG7-209ENST00000564047 XCL2Q9UBD3 114 aa9.42□□□□□ -0.9
SPG7-209ENST00000564047 EPPK1P58107 5090 aaKnown RBP9.42□□□□□ -0.9
SPG7-209ENST00000564047 K7EIL1 84 aa9.41□□□□□ -0.9
SPG7-209ENST00000564047 TCL1AP56279 114 aa9.41□□□□□ -0.9
SPG7-209ENST00000564047 CSNK1G2-AS1Q8NCQ2 148 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms