RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 LOC100131303A0A0U1RQF7 123 aa14.05□□□□□ -0.16
HERC2-204ENST00000563945 PGPA6NDG6 321 aa14.05□□□□□ -0.16
HERC2-204ENST00000563945 TIRAPP58753 221 aa14.05□□□□□ -0.16
HERC2-204ENST00000563945 HAMPP81172 84 aa14.05□□□□□ -0.16
HERC2-204ENST00000563945 TDRG1Q3Y452 100 aa14.05□□□□□ -0.16
HERC2-204ENST00000563945 OR10J3Q5JRS4 329 aa14.05□□□□□ -0.16
HERC2-204ENST00000563945 SCGB1C1Q8TD33 95 aa14.05□□□□□ -0.16
HERC2-204ENST00000563945 Q9HAA7 133 aa14.05□□□□□ -0.16
HERC2-204ENST00000563945 SDF2L1Q9HCN8 221 aa14.05□□□□□ -0.16
HERC2-204ENST00000563945 OR5AC2Q9NZP5 309 aa14.05□□□□□ -0.16
HERC2-204ENST00000563945 KCNS1Q96KK3 526 aa14.04□□□□□ -0.16
HERC2-204ENST00000563945 PRADC1Q9BSG0 188 aa14.04□□□□□ -0.16
HERC2-204ENST00000563945 OTORQ9NRC9 128 aa14.04□□□□□ -0.16
HERC2-204ENST00000563945 FBLL1A6NHQ2 334 aaKnown RBP14.03□□□□□ -0.16
HERC2-204ENST00000563945 IBA57-AS1B1ANH7 110 aa14.03□□□□□ -0.16
HERC2-204ENST00000563945 J3QL48 77 aa14.03□□□□□ -0.16
HERC2-204ENST00000563945 GATA1P15976 413 aaPredicted RBP14.03□□□□□ -0.16
HERC2-204ENST00000563945 LINC01556Q5JQF7 62 aa14.03□□□□□ -0.16
HERC2-204ENST00000563945 MBD2Q9UBB5 411 aa14.03□□□□□ -0.16
HERC2-204ENST00000563945 SRRM2Q9UQ35 2752 aaKnown RBP14.03□□□□□ -0.16
HERC2-204ENST00000563945 TREM1Q9NP99 234 aa14.02□□□□□ -0.17
HERC2-204ENST00000563945 NDUFA13Q9P0J0 144 aa14.02□□□□□ -0.17
HERC2-204ENST00000563945 LRCOL1A6NCL2 159 aa14.01□□□□□ -0.17
HERC2-204ENST00000563945 CIDEAO60543 219 aa14.01□□□□□ -0.17
HERC2-204ENST00000563945 GOLT1AQ6ZVE7 132 aa14.01□□□□□ -0.17
HERC2-204ENST00000563945 Q8N814 137 aa14.01□□□□□ -0.17
HERC2-204ENST00000563945 ENKURQ8TC29 256 aa14.01□□□□□ -0.17
HERC2-204ENST00000563945 ASB13Q8WXK3 278 aa14.01□□□□□ -0.17
HERC2-204ENST00000563945 A0A1W2PPV4 95 aa14□□□□□ -0.17
HERC2-204ENST00000563945 F6UZH7 168 aa14□□□□□ -0.17
HERC2-204ENST00000563945 IGHV3-30P01768 117 aa14□□□□□ -0.17
HERC2-204ENST00000563945 IGHV3-33P01772 117 aa14□□□□□ -0.17
HERC2-204ENST00000563945 TYMSP04818 313 aa14□□□□□ -0.17
HERC2-204ENST00000563945 IGHV3-30-3P0DP02 117 aa14□□□□□ -0.17
HERC2-204ENST00000563945 IGHV3-30-5P0DP03 117 aa14□□□□□ -0.17
HERC2-204ENST00000563945 ZNF876PQ49A33 203 aa14□□□□□ -0.17
HERC2-204ENST00000563945 NDFIP1Q9BT67 221 aa14□□□□□ -0.17
HERC2-204ENST00000563945 TM2D2Q9BX73 214 aa14□□□□□ -0.17
HERC2-204ENST00000563945 H0YIZ8 118 aa13.99□□□□□ -0.17
HERC2-204ENST00000563945 RHOHQ15669 191 aa13.99□□□□□ -0.17
HERC2-204ENST00000563945 PET100P0DJ07 73 aa13.98□□□□□ -0.17
HERC2-204ENST00000563945 ACOT6Q3I5F7 207 aaPredicted RBP13.98□□□□□ -0.17
HERC2-204ENST00000563945 ARL6IP6Q8N6S5 226 aa13.98□□□□□ -0.17
HERC2-204ENST00000563945 SLC25A29Q8N8R3 303 aa13.98□□□□□ -0.17
HERC2-204ENST00000563945 SH3BGRL3Q9H299 93 aa13.98□□□□□ -0.17
HERC2-204ENST00000563945 ASAH1Q13510 395 aa13.97□□□□□ -0.17
HERC2-204ENST00000563945 LELP1Q5T871 98 aa13.97□□□□□ -0.17
HERC2-204ENST00000563945 PQLC2Q6ZP29 291 aa13.97□□□□□ -0.17
HERC2-204ENST00000563945 SMIM3Q9BZL3 60 aa13.97□□□□□ -0.17
HERC2-204ENST00000563945 HSPB11Q9Y547 144 aa13.97□□□□□ -0.17
HERC2-204ENST00000563945 VPS13BQ7Z7G8 4022 aa13.97□□□□□ -0.17
HERC2-204ENST00000563945 TRBV6-4A0A1B0GX49 114 aa13.96□□□□□ -0.17
HERC2-204ENST00000563945 EIF3GO75821 320 aaKnown RBP eCLIP13.96□□□□□ -0.17
HERC2-204ENST00000563945 ATP6V0E2Q8NHE4 81 aa13.96□□□□□ -0.17
HERC2-204ENST00000563945 PPP1R1CQ8WVI7 109 aa13.96□□□□□ -0.17
HERC2-204ENST00000563945 TRAV8-1A0A0A6YYK1 113 aa13.95□□□□□ -0.18
HERC2-204ENST00000563945 IGHV3-73A0A0B4J1V6 119 aa13.95□□□□□ -0.18
HERC2-204ENST00000563945 RS1O15537 224 aa13.95□□□□□ -0.18
HERC2-204ENST00000563945 C1QBP02746 253 aa13.95□□□□□ -0.18
HERC2-204ENST00000563945 PLA2G1BP04054 148 aaKnown RBP13.95□□□□□ -0.18
HERC2-204ENST00000563945 CFAP126Q5VTH2 177 aa13.95□□□□□ -0.18
HERC2-204ENST00000563945 K7EQM0 130 aa13.94□□□□□ -0.18
HERC2-204ENST00000563945 RPL12P30050 165 aaKnown RBP13.94□□□□□ -0.18
HERC2-204ENST00000563945 S100ZQ8WXG8 99 aa13.94□□□□□ -0.18
HERC2-204ENST00000563945 TVP23CQ96ET8 276 aa13.94□□□□□ -0.18
HERC2-204ENST00000563945 GTSF1LQ9H1H1 148 aa13.94□□□□□ -0.18
HERC2-204ENST00000563945 INMT-MINDY4F8WBC2 141 aa13.93□□□□□ -0.18
HERC2-204ENST00000563945 TAAR5O14804 337 aa13.93□□□□□ -0.18
HERC2-204ENST00000563945 GNG5P63218 68 aa13.93□□□□□ -0.18
HERC2-204ENST00000563945 LAGE3Q14657 143 aa13.93□□□□□ -0.18
HERC2-204ENST00000563945 SGK494Q96LW2 274 aa13.93□□□□□ -0.18
HERC2-204ENST00000563945 FAM30AQ9NZY2 134 aa13.93□□□□□ -0.18
HERC2-204ENST00000563945 MYCBP2O75592 4640 aa13.92□□□□□ -0.18
HERC2-204ENST00000563945 SERTM2A0A1B0GWG4 89 aa13.92□□□□□ -0.18
HERC2-204ENST00000563945 SSNA1O43805 119 aa13.92□□□□□ -0.18
HERC2-204ENST00000563945 MGST1P10620 155 aaKnown RBP13.92□□□□□ -0.18
HERC2-204ENST00000563945 TRAV8-3A0A0A6YYJ7 113 aa13.91□□□□□ -0.18
HERC2-204ENST00000563945 MPC2O95563 127 aa13.91□□□□□ -0.18
HERC2-204ENST00000563945 ZFP69Q49AA0 526 aa13.91□□□□□ -0.18
HERC2-204ENST00000563945 TOR2AQ5JU69 321 aa13.91□□□□□ -0.18
HERC2-204ENST00000563945 OR10G9Q8NGN4 311 aa13.91□□□□□ -0.18
HERC2-204ENST00000563945 OR10G7Q8NGN6 311 aa13.91□□□□□ -0.18
HERC2-204ENST00000563945 HMGB3O15347 200 aaKnown RBP13.9□□□□□ -0.18
HERC2-204ENST00000563945 H2BFSP57053 126 aa13.9□□□□□ -0.18
HERC2-204ENST00000563945 DPPA3Q6W0C5 159 aa13.9□□□□□ -0.18
HERC2-204ENST00000563945 LINC00299Q6ZSB3 139 aa13.9□□□□□ -0.18
HERC2-204ENST00000563945 GCGP01275 180 aa13.89□□□□□ -0.19
HERC2-204ENST00000563945 RAB2AP61019 212 aa13.89□□□□□ -0.19
HERC2-204ENST00000563945 PGPEP1LA6NFU8 196 aa13.88□□□□□ -0.19
HERC2-204ENST00000563945 SMUG1Q53HV7 270 aa13.88□□□□□ -0.19
HERC2-204ENST00000563945 ZNF506Q5JVG8 444 aa13.88□□□□□ -0.19
HERC2-204ENST00000563945 C5orf17Q8NAS9 161 aa13.88□□□□□ -0.19
HERC2-204ENST00000563945 PSG8Q9UQ74 426 aa13.88□□□□□ -0.19
HERC2-204ENST00000563945 COX11Q9Y6N1 276 aa13.88□□□□□ -0.19
HERC2-204ENST00000563945 GGTLC3B5MD39 225 aa13.87□□□□□ -0.19
HERC2-204ENST00000563945 S100A4P26447 101 aaKnown RBP13.87□□□□□ -0.19
HERC2-204ENST00000563945 LINC00528Q8N1L1 170 aa13.87□□□□□ -0.19
HERC2-204ENST00000563945 PTH2Q96A98 100 aa13.87□□□□□ -0.19
HERC2-204ENST00000563945 C9orf85Q96MD7 179 aa13.87□□□□□ -0.19
HERC2-204ENST00000563945 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms