RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 PXMP4Q9Y6I8 212 aa6.36□□□□□ -1.39
HDGFL3-204ENST00000563790 PIGBOS1A0A0B4J2F0 54 aa6.35□□□□□ -1.39
HDGFL3-204ENST00000563790 AGPAT2O15120 278 aa6.35□□□□□ -1.39
HDGFL3-204ENST00000563790 ZNF253O75346 499 aa6.35□□□□□ -1.39
HDGFL3-204ENST00000563790 ANXA7P20073 488 aaKnown RBP6.35□□□□□ -1.39
HDGFL3-204ENST00000563790 PPT1P50897 306 aa6.35□□□□□ -1.39
HDGFL3-204ENST00000563790 IQCF2Q8IXL9 164 aa6.35□□□□□ -1.39
HDGFL3-204ENST00000563790 PSENENQ9NZ42 101 aa6.35□□□□□ -1.39
HDGFL3-204ENST00000563790 RABL2AQ9UBK7 228 aaPredicted RBP6.35□□□□□ -1.39
HDGFL3-204ENST00000563790 OR4E1P0C645 316 aa6.34□□□□□ -1.39
HDGFL3-204ENST00000563790 METTL15P1P0C7V9 234 aa6.34□□□□□ -1.39
HDGFL3-204ENST00000563790 Q6ZRP5 223 aa6.34□□□□□ -1.39
HDGFL3-204ENST00000563790 MRPL53Q96EL3 112 aaKnown RBP6.34□□□□□ -1.39
HDGFL3-204ENST00000563790 ZNF479Q96JC4 524 aa6.34□□□□□ -1.39
HDGFL3-204ENST00000563790 SLIRPQ9GZT3 109 aaKnown RBP6.34□□□□□ -1.39
HDGFL3-204ENST00000563790 CCDC59Q9P031 241 aaKnown RBP6.34□□□□□ -1.39
HDGFL3-204ENST00000563790 TRBV19A0A075B6N1 114 aa6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 GGTLC3B5MD39 225 aa6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 M0R2T5 61 aa6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 SSSCA1O60232 199 aa6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 PRSS1P07477 247 aa6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 SFTA3P0C7M3 94 aa6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 TMEM183BQ1AE95 376 aa6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 DAZ4Q86SG3 579 aaKnown RBP6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 ZNF546Q86UE3 836 aa6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 TMEM183AQ8IXX5 376 aa6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 C11orf1Q9H5F2 150 aa6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 DAZ3Q9NR90 486 aaKnown RBP6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 RSL24D1Q9UHA3 163 aaKnown RBP6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 V9GYH0 126 aa6.33□□□□□ -1.4
HDGFL3-204ENST00000563790 LOC100131303A0A0U1RQF7 123 aa6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 C9orf170A2RU37 121 aa6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 TSC22D2O75157 780 aa6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 MPDU1O75352 247 aa6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 TSPAN13O95857 204 aa6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 NMBP08949 121 aa6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 RNASE4P34096 147 aaKnown RBP6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 TAS2R30P59541 319 aa6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 GUK1Q16774 197 aa6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 C10orf113Q5VZT2 155 aa6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 S100A7AQ86SG5 101 aa6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 OR10G4Q8NGN3 311 aa6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 RASL10AQ92737 203 aa6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 SLC25A21Q9BQT8 299 aaPredicted RBP6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 RNF24Q9Y225 148 aa6.32□□□□□ -1.4
HDGFL3-204ENST00000563790 IGHV1OR15-1A0A075B7D0 117 aa6.31□□□□□ -1.4
HDGFL3-204ENST00000563790 C7orf66A4D0T2 115 aa6.31□□□□□ -1.4
HDGFL3-204ENST00000563790 GOSR2O14653 212 aa6.31□□□□□ -1.4
HDGFL3-204ENST00000563790 COX7A2P2O60397 106 aa6.31□□□□□ -1.4
HDGFL3-204ENST00000563790 MIC13Q5XKP0 118 aa6.31□□□□□ -1.4
HDGFL3-204ENST00000563790 INO80EQ8NBZ0 244 aaPredicted RBP6.31□□□□□ -1.4
HDGFL3-204ENST00000563790 OR10P1Q8NGE3 313 aa6.31□□□□□ -1.4
HDGFL3-204ENST00000563790 DNAJC30Q96LL9 226 aa6.31□□□□□ -1.4
HDGFL3-204ENST00000563790 LINC00477Q96M19 166 aa6.31□□□□□ -1.4
HDGFL3-204ENST00000563790 GGACTQ9BVM4 153 aa6.31□□□□□ -1.4
HDGFL3-204ENST00000563790 URGCP-MRPS24S4R325 110 aa6.31□□□□□ -1.4
HDGFL3-204ENST00000563790 IGKV2-40A0A087WW87 121 aaPredicted RBP6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 TRAV1-1A0A0B4J248 108 aa6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 TRGV4A0A0C4DH28 118 aa6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 IGKV2D-40P01614 121 aaPredicted RBP6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 UBE2MP61081 183 aaKnown RBP6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 VWC2Q2TAL6 325 aa6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 ATRAIDQ6UW56 229 aa6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 EXOC3-AS1Q8N2X6 119 aa6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 ARL6IP6Q8N6S5 226 aa6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 RAB2BQ8WUD1 216 aa6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 LINC00479Q96M42 142 aa6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 TMEM14CQ9P0S9 112 aa6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 ZNF492Q9P255 531 aa6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 WDR83OSQ9Y284 106 aa6.3□□□□□ -1.4
HDGFL3-204ENST00000563790 FABP12A6NFH5 140 aa6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 USP17L23D6RBM5 183 aa6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 MBPP02686 304 aaPredicted RBP6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 KRTAP2-3P0C7H8 128 aa6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 PYYP10082 97 aa6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 GATA1P15976 413 aaPredicted RBP6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 PDE6HQ13956 83 aa6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 NRARPQ7Z6K4 114 aa6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 MCFD2Q8NI22 146 aa6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 DEDD2Q8WXF8 326 aa6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 FAM167A-AS1Q96KT0 104 aa6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 KRTAP2-4Q9BYR9 128 aa6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 AP5S1Q9NUS5 200 aa6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 MGAT4CQ9UBM8 478 aa6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 FLVCR2Q9UPI3 526 aa6.29□□□□□ -1.4
HDGFL3-204ENST00000563790 TRBV7-9A0A0J9YWB2 115 aa6.28□□□□□ -1.4
HDGFL3-204ENST00000563790 GPX1P07203 203 aa6.28□□□□□ -1.4
HDGFL3-204ENST00000563790 HIST1H1EP10412 219 aaKnown RBP6.28□□□□□ -1.4
HDGFL3-204ENST00000563790 BTCP35070 178 aa6.28□□□□□ -1.4
HDGFL3-204ENST00000563790 FAUP35544 74 aaKnown RBP6.28□□□□□ -1.4
HDGFL3-204ENST00000563790 CAMLGP49069 296 aa6.28□□□□□ -1.4
HDGFL3-204ENST00000563790 C21orf62-AS1Q17RA5 79 aa6.28□□□□□ -1.4
HDGFL3-204ENST00000563790 TOMM5Q8N4H5 51 aa6.28□□□□□ -1.4
HDGFL3-204ENST00000563790 LYPD6BQ8NI32 183 aa6.28□□□□□ -1.4
HDGFL3-204ENST00000563790 LINC00846Q9NV44 126 aa6.28□□□□□ -1.4
HDGFL3-204ENST00000563790 PRELID1Q9Y255 219 aa6.28□□□□□ -1.4
HDGFL3-204ENST00000563790 IGHV3-64A0A075B6Q5 118 aa6.27□□□□□ -1.41
HDGFL3-204ENST00000563790 MUC21A0A0G2JKD1 596 aa6.27□□□□□ -1.41
HDGFL3-204ENST00000563790 NDUFB6O95139 128 aa6.27□□□□□ -1.41
HDGFL3-204ENST00000563790 RPL29P47914 159 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms