RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 IGKV1-13P0DP09 117 aa7.11□□□□□ -1.27
CDH1-205ENST00000562836 IGKV1-8A0A0C4DH67 115 aa7.1□□□□□ -1.27
CDH1-205ENST00000562836 E7EUB6 86 aa7.1□□□□□ -1.27
CDH1-205ENST00000562836 Q9H8V8 135 aa7.1□□□□□ -1.27
CDH1-205ENST00000562836 ADARB2-AS1A8MUL3 147 aa7.1□□□□□ -1.27
CDH1-205ENST00000562836 SH2D1AO60880 128 aa7.1□□□□□ -1.27
CDH1-205ENST00000562836 OVOL2Q9BRP0 275 aa7.1□□□□□ -1.27
CDH1-205ENST00000562836 LRRK1Q38SD2 2015 aa7.1□□□□□ -1.27
CDH1-205ENST00000562836 IGKV1-5P01602 117 aa7.09□□□□□ -1.27
CDH1-205ENST00000562836 IGHV3-33P01772 117 aa7.09□□□□□ -1.27
CDH1-205ENST00000562836 RPP21Q9H633 154 aaKnown RBP7.09□□□□□ -1.27
CDH1-205ENST00000562836 ZNF815PA8K554 130 aa7.09□□□□□ -1.27
CDH1-205ENST00000562836 IGKV1-39P01597 117 aa7.09□□□□□ -1.27
CDH1-205ENST00000562836 IGKV1D-39P04432 117 aa7.09□□□□□ -1.27
CDH1-205ENST00000562836 COX14Q96I36 57 aa7.09□□□□□ -1.27
CDH1-205ENST00000562836 IGHV1-45A0A0A0MS14 117 aa7.08□□□□□ -1.28
CDH1-205ENST00000562836 IGHV5-51A0A0C4DH38 117 aa7.08□□□□□ -1.28
CDH1-205ENST00000562836 D6R8Y8 96 aa7.08□□□□□ -1.28
CDH1-205ENST00000562836 ZNF497Q6ZNH5 498 aa7.08□□□□□ -1.28
CDH1-205ENST00000562836 CCL26Q9Y258 94 aa7.08□□□□□ -1.28
CDH1-205ENST00000562836 GHRHP01286 108 aa7.08□□□□□ -1.28
CDH1-205ENST00000562836 C6orf106Q9H6K1 298 aaPredicted RBP7.08□□□□□ -1.28
CDH1-205ENST00000562836 RNF186Q9NXI6 227 aa7.08□□□□□ -1.28
CDH1-205ENST00000562836 LY6G5CQ5SRR4 150 aa7.08□□□□□ -1.28
CDH1-205ENST00000562836 DYNLRB1Q9NP97 96 aa7.08□□□□□ -1.28
CDH1-205ENST00000562836 RAI1Q7Z5J4 1906 aaPredicted RBP7.08□□□□□ -1.28
CDH1-205ENST00000562836 INTS1Q8N201 2190 aaKnown RBP7.07□□□□□ -1.28
CDH1-205ENST00000562836 DSCAML1Q8TD84 2053 aa7.07□□□□□ -1.28
CDH1-205ENST00000562836 CDH23Q9H251 3354 aa7.07□□□□□ -1.28
CDH1-205ENST00000562836 A8MUN3 132 aa7.07□□□□□ -1.28
CDH1-205ENST00000562836 PSPNO60542 156 aa7.07□□□□□ -1.28
CDH1-205ENST00000562836 ZNF80P51504 273 aaPredicted RBP7.07□□□□□ -1.28
CDH1-205ENST00000562836 LINC00205P59089 165 aa7.07□□□□□ -1.28
CDH1-205ENST00000562836 MIR17HGQ75NE6 70 aa7.07□□□□□ -1.28
CDH1-205ENST00000562836 LINC00588Q9Y4M8 146 aa7.07□□□□□ -1.28
CDH1-205ENST00000562836 IGKV1-9A0A0C4DH69 117 aa7.07□□□□□ -1.28
CDH1-205ENST00000562836 TRBV27A0A0K0K1C4 114 aa7.07□□□□□ -1.28
CDH1-205ENST00000562836 NDUFB3O43676 98 aa7.07□□□□□ -1.28
CDH1-205ENST00000562836 MORN5Q5VZ52 161 aa7.07□□□□□ -1.28
CDH1-205ENST00000562836 LINC00322Q6ZN03 302 aaPredicted RBP7.07□□□□□ -1.28
CDH1-205ENST00000562836 STATHP02808 62 aa7.06□□□□□ -1.28
CDH1-205ENST00000562836 GP1BBP13224 206 aa7.06□□□□□ -1.28
CDH1-205ENST00000562836 SPINK9Q5DT21 86 aa7.06□□□□□ -1.28
CDH1-205ENST00000562836 TMEM167BQ9NRX6 74 aa7.06□□□□□ -1.28
CDH1-205ENST00000562836 F8WEM9 126 aa7.06□□□□□ -1.28
CDH1-205ENST00000562836 GFRA3O60609 400 aa7.06□□□□□ -1.28
CDH1-205ENST00000562836 CRIP3Q6Q6R5 217 aa7.06□□□□□ -1.28
CDH1-205ENST00000562836 LINC00114Q6XXX2 140 aa7.06□□□□□ -1.28
CDH1-205ENST00000562836 DYNAPQ8N1N2 210 aa7.06□□□□□ -1.28
CDH1-205ENST00000562836 Q6ZPA2 131 aa7.05□□□□□ -1.28
CDH1-205ENST00000562836 Q96M66 194 aa7.05□□□□□ -1.28
CDH1-205ENST00000562836 C7orf69Q9H7B7 122 aa7.05□□□□□ -1.28
CDH1-205ENST00000562836 FER1L5A0AVI2 2057 aa7.05□□□□□ -1.28
CDH1-205ENST00000562836 TRIAP1O43715 76 aa7.05□□□□□ -1.28
CDH1-205ENST00000562836 FAM216BQ8N7L0 139 aa7.05□□□□□ -1.28
CDH1-205ENST00000562836 TIMM21Q9BVV7 248 aa7.05□□□□□ -1.28
CDH1-205ENST00000562836 PI4KAP42356 2102 aa7.04□□□□□ -1.28
CDH1-205ENST00000562836 PRRC2BQ5JSZ5 2229 aaKnown RBP7.04□□□□□ -1.28
CDH1-205ENST00000562836 EIF4EBP3O60516 100 aaPredicted RBP7.04□□□□□ -1.28
CDH1-205ENST00000562836 IGHV3-30P01768 117 aa7.04□□□□□ -1.28
CDH1-205ENST00000562836 ARMS2P0C7Q2 107 aa7.04□□□□□ -1.28
CDH1-205ENST00000562836 IGHV3-30-5P0DP03 117 aa7.04□□□□□ -1.28
CDH1-205ENST00000562836 LYZL4Q96KX0 146 aa7.04□□□□□ -1.28
CDH1-205ENST00000562836 FREM1Q5H8C1 2179 aa7.04□□□□□ -1.28
CDH1-205ENST00000562836 TRAV8-3A0A0A6YYJ7 113 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 GUSBP11Q6P575 273 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 KLHL30-AS1Q8NEE0 82 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 DEFB127Q9H1M4 99 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 SNURFQ9Y675 71 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 IGKV1D-17A0A075B6S4 117 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 A0A1B0GUT8 65 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 M0R381 172 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 ZGRF1Q86YA3 2104 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 TMEM263Q8WUH6 116 aaKnown RBP7.03□□□□□ -1.28
CDH1-205ENST00000562836 CLEC2BQ92478 149 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 DCTN5Q9BTE1 182 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 A8MU10 97 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 VN1R4Q7Z5H5 301 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 RMI2Q96E14 147 aa7.03□□□□□ -1.28
CDH1-205ENST00000562836 PDE4DIPQ5VU43 2346 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 LYRM9A8MSI8 78 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 IGHV3-13P01766 116 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 SPTSSAQ969W0 71 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 TSACCQ96A04 125 aaPredicted RBP7.02□□□□□ -1.29
CDH1-205ENST00000562836 GFRA4Q9GZZ7 299 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 PIGBOS1A0A0B4J2F0 54 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 LST1O00453 97 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 UBE2L6O14933 153 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 NDUFS5O43920 106 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 PLNP26678 52 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 RIGQ13278 110 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 Q6ZS46 218 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 ORMDL3Q8N138 153 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 CCL17Q92583 94 aa7.02□□□□□ -1.29
CDH1-205ENST00000562836 TRAV23DV6A0A075B6W5 121 aa7.01□□□□□ -1.29
CDH1-205ENST00000562836 IGLV1-36A0A0B4J1U3 117 aa7.01□□□□□ -1.29
CDH1-205ENST00000562836 A0A0J9YY99 117 aa7.01□□□□□ -1.29
CDH1-205ENST00000562836 WISP1O95388 367 aa7.01□□□□□ -1.29
CDH1-205ENST00000562836 ZNF329Q86UD4 541 aa7.01□□□□□ -1.29
CDH1-205ENST00000562836 ZNF71Q9NQZ8 489 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms