RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 RNASE7Q9H1E1 156 aaKnown RBP5.93□□□□□ -1.46
TCF4-216ENST00000562680 PTPN13Q12923 2485 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 NAV3Q8IVL0 2385 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 IGHV7-4-1A0A0J9YVY3 117 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 TEX22C9J3V5 150 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 ZNF56Q15929 161 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 SLC25A2Q9BXI2 301 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 CRXO43186 299 aaPredicted RBP5.93□□□□□ -1.46
TCF4-216ENST00000562680 PTPRBP23467 1997 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 NDUFV3P56181 108 aaKnown RBP5.93□□□□□ -1.46
TCF4-216ENST00000562680 ZNF726P1Q15940 193 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 FAM231DQ6ZW35 169 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 LENEPQ9Y5L5 61 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 HIVEP3Q5T1R4 2406 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 IGKV2-40A0A087WW87 121 aaPredicted RBP5.92□□□□□ -1.46
TCF4-216ENST00000562680 M0R381 172 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 IGKV2D-40P01614 121 aaPredicted RBP5.92□□□□□ -1.46
TCF4-216ENST00000562680 ANKRD29Q8N6D5 301 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 FOXC2Q99958 501 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 SIGLEC8Q9NYZ4 499 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 LY6LH3BQJ8 138 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 CD7P09564 240 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 CFHR4Q92496 578 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 MBD6Q96DN6 1003 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 C11orf68Q9H3H3 251 aaKnown RBP5.92□□□□□ -1.46
TCF4-216ENST00000562680 NXT2Q9NPJ8 142 aaKnown RBP5.92□□□□□ -1.46
TCF4-216ENST00000562680 PFN1P07737 140 aaKnown RBP5.92□□□□□ -1.46
TCF4-216ENST00000562680 LINC01559Q495D7 138 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 BCL6BQ8N143 479 aaPredicted RBP5.92□□□□□ -1.46
TCF4-216ENST00000562680 C11orf44Q8N8P7 122 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 hDV102S1A0JD36 115 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 NDPQ00604 133 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 CYYR1Q96J86 154 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 UBE2E2Q96LR5 201 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 K7EMT4 169 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 IGKV1-17P01599 117 aa5.92□□□□□ -1.46
TCF4-216ENST00000562680 CHCHD1Q96BP2 118 aaKnown RBP5.92□□□□□ -1.46
TCF4-216ENST00000562680 CENPFP49454 3210 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 INSP01308 110 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 IGLL1P15814 213 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 FXYD5Q96DB9 178 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 PLA2G2AP14555 144 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 C3orf56Q8N813 242 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 IGHV4-31P0DP07 118 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 Q6ZUT4 128 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 ATP6V0E2Q8NHE4 81 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 C18orf32Q8TCD1 76 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 ZNF414Q96IQ9 312 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 GGTLC3B5MD39 225 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 RETNQ9HD89 108 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 CHD8Q9HCK8 2581 aa5.91□□□□□ -1.46
TCF4-216ENST00000562680 RBAKDNA6NC62 111 aa5.9□□□□□ -1.46
TCF4-216ENST00000562680 LGALS3P17931 250 aaKnown RBP5.9□□□□□ -1.46
TCF4-216ENST00000562680 BRWD1-AS2P59051 145 aa5.9□□□□□ -1.46
TCF4-216ENST00000562680 FAM74A4Q5TZK3 123 aa5.9□□□□□ -1.46
TCF4-216ENST00000562680 SH2D1AO60880 128 aa5.9□□□□□ -1.47
TCF4-216ENST00000562680 IGF1P05019 195 aa5.9□□□□□ -1.47
TCF4-216ENST00000562680 DNAH12Q6ZR08 3092 aa5.9□□□□□ -1.47
TCF4-216ENST00000562680 CRYGBP07316 175 aa5.9□□□□□ -1.47
TCF4-216ENST00000562680 CDSNQ15517 529 aa5.9□□□□□ -1.47
TCF4-216ENST00000562680 C19orf54Q5BKX5 351 aa5.9□□□□□ -1.47
TCF4-216ENST00000562680 CCDC168Q8NDH2 2452 aa5.9□□□□□ -1.47
TCF4-216ENST00000562680 CTSGP08311 255 aa5.9□□□□□ -1.47
TCF4-216ENST00000562680 PPIFP30405 207 aaKnown RBP5.9□□□□□ -1.47
TCF4-216ENST00000562680 FOXA3P55318 350 aaPredicted RBP5.9□□□□□ -1.47
TCF4-216ENST00000562680 RCHY1Q96PM5 261 aa5.9□□□□□ -1.47
TCF4-216ENST00000562680 SYS1-DBNDD2H3BUS1 97 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 H7C2G1 150 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 UBE2L6O14933 153 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 RS1O15537 224 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 RITA1Q96K30 269 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 BLCAPP62952 87 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 PRR31Q5SQ13 230 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 GPHB5Q86YW7 130 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 ARFGEF3Q5TH69 2177 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 FOXI1Q12951 378 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 IL17RELQ6ZVW7 336 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 HTTP42858 3142 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 TINCRA0A1B0GVN0 87 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 COX8AP10176 69 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 DEFB131AP59861 70 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 TMEM258P61165 79 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 BRK1Q8WUW1 75 aa5.89□□□□□ -1.47
TCF4-216ENST00000562680 WI2-2373I1.2A0A1W2PRP0 233 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 PRR25Q96S07 402 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 KLK15Q9H2R5 256 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 HOXD3P31249 432 aaPredicted RBP5.88□□□□□ -1.47
TCF4-216ENST00000562680 Q6YL49 198 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 TRGV2A0A075B6R0 118 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 TRAV13-1A0A0B4J241 112 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 APOHP02749 345 aaPredicted RBP5.88□□□□□ -1.47
TCF4-216ENST00000562680 ORMDL2Q53FV1 153 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 NEGR1Q7Z3B1 354 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 SH2D6Q7Z4S9 175 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 C15orf53Q8NAA6 179 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 FANCD2OSQ96PS1 177 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 UTRNP46939 3433 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 PPDPFQ9H3Y8 114 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 K7EN84 100 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 MT-ATP8P03928 68 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms