RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 OBSL1O75147 1896 aa11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 VOPP1Q96AW1 172 aa11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 FAM110AQ9BQ89 295 aa11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 ATP5EP56381 51 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P12-202ENST00000559989 UPK3BQ9BT76 320 aa11.04□□□□□ -0.64
CSPG4P12-202ENST00000559989 UBE2E1P51965 193 aa11.04□□□□□ -0.64
CSPG4P12-202ENST00000559989 Q6ZS49 121 aa11.04□□□□□ -0.64
CSPG4P12-202ENST00000559989 DIRC1Q969H9 104 aa11.04□□□□□ -0.64
CSPG4P12-202ENST00000559989 KLF2Q9Y5W3 355 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P12-202ENST00000559989 Q6ZUT4 128 aa11.04□□□□□ -0.64
CSPG4P12-202ENST00000559989 LCTP09848 1927 aa11.04□□□□□ -0.64
CSPG4P12-202ENST00000559989 IGKV1-27A0A075B6S5 117 aa11.03□□□□□ -0.64
CSPG4P12-202ENST00000559989 LGALS9O00182 355 aa11.03□□□□□ -0.64
CSPG4P12-202ENST00000559989 NCR3O14931 201 aa11.03□□□□□ -0.64
CSPG4P12-202ENST00000559989 CYYR1Q96J86 154 aa11.03□□□□□ -0.64
CSPG4P12-202ENST00000559989 CCL18P55774 89 aa11.03□□□□□ -0.64
CSPG4P12-202ENST00000559989 ZC2HC1AQ96GY0 325 aa11.03□□□□□ -0.64
CSPG4P12-202ENST00000559989 HOXB4P17483 251 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P12-202ENST00000559989 BRCA1P38398 1863 aaKnown RBP11.03□□□□□ -0.64
CSPG4P12-202ENST00000559989 MSMBP08118 114 aa11.03□□□□□ -0.64
CSPG4P12-202ENST00000559989 EIF4EBP2Q13542 120 aaPredicted RBP11.02□□□□□ -0.64
CSPG4P12-202ENST00000559989 LY6DQ14210 128 aa11.02□□□□□ -0.64
CSPG4P12-202ENST00000559989 C5orf38Q86SI9 138 aa11.02□□□□□ -0.65
CSPG4P12-202ENST00000559989 NDUFA4L2Q9NRX3 87 aa11.02□□□□□ -0.65
CSPG4P12-202ENST00000559989 A0A0J9YY99 117 aa11.02□□□□□ -0.65
CSPG4P12-202ENST00000559989 FAM236DA0A1B0GTK5 79 aa11.02□□□□□ -0.65
CSPG4P12-202ENST00000559989 FAM236CP0DP71 79 aa11.02□□□□□ -0.65
CSPG4P12-202ENST00000559989 COLQQ9Y215 455 aaPredicted RBP11.02□□□□□ -0.65
CSPG4P12-202ENST00000559989 IGHV1-69DA0A0B4J2H0 117 aa11.02□□□□□ -0.65
CSPG4P12-202ENST00000559989 TRBV10-2A0A0K0K1G8 114 aa11.02□□□□□ -0.65
CSPG4P12-202ENST00000559989 MLANAQ16655 118 aa11.02□□□□□ -0.65
CSPG4P12-202ENST00000559989 SERP1Q9Y6X1 66 aa11.01□□□□□ -0.65
CSPG4P12-202ENST00000559989 IGKV1-16P04430 117 aa11.01□□□□□ -0.65
CSPG4P12-202ENST00000559989 IGLC1P0CG04 106 aa11.01□□□□□ -0.65
CSPG4P12-202ENST00000559989 ADCYAP1P18509 176 aa11.01□□□□□ -0.65
CSPG4P12-202ENST00000559989 RUSC1-AS1Q66K80 236 aa11.01□□□□□ -0.65
CSPG4P12-202ENST00000559989 TM2D2Q9BX73 214 aa11.01□□□□□ -0.65
CSPG4P12-202ENST00000559989 RNF152Q8N8N0 203 aa11.01□□□□□ -0.65
CSPG4P12-202ENST00000559989 GNLYP22749 145 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 C16orf74Q96GX8 76 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 BPESC1Q9GZL8 116 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 K7EQD1 137 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 NDUFA1O15239 70 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 Q71RC1 249 aaPredicted RBP11□□□□□ -0.65
CSPG4P12-202ENST00000559989 A0A0G2JNJ9 132 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 IGHV1-69P01742 117 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 FANCD2OSQ96PS1 177 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 Q9UFV3 132 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 IGLV3-12A0A075B6K2 115 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 IGHV7-4-1A0A0J9YVY3 117 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 SPACA3Q8IXA5 215 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 ATP6V0E2Q8NHE4 81 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 RBAKDNA6NC62 111 aa11□□□□□ -0.65
CSPG4P12-202ENST00000559989 GREB1LQ9C091 1923 aaPredicted RBP11□□□□□ -0.65
CSPG4P12-202ENST00000559989 LYPD2Q6UXB3 125 aa10.99□□□□□ -0.65
CSPG4P12-202ENST00000559989 ZNF833PQ6ZTB9 187 aa10.99□□□□□ -0.65
CSPG4P12-202ENST00000559989 IGKV1D-17A0A075B6S4 117 aa10.99□□□□□ -0.65
CSPG4P12-202ENST00000559989 J3QLI3 93 aa10.99□□□□□ -0.65
CSPG4P12-202ENST00000559989 FOXI1Q12951 378 aa10.99□□□□□ -0.65
CSPG4P12-202ENST00000559989 TRAV23DV6A0A075B6W5 121 aa10.99□□□□□ -0.65
CSPG4P12-202ENST00000559989 BPY2O14599 106 aa10.99□□□□□ -0.65
CSPG4P12-202ENST00000559989 GGNQ86UU5 652 aa10.98□□□□□ -0.65
CSPG4P12-202ENST00000559989 IGHV2-70DA0A0C4DH43 119 aa10.98□□□□□ -0.65
CSPG4P12-202ENST00000559989 K7EM74 188 aa10.98□□□□□ -0.65
CSPG4P12-202ENST00000559989 A6NED7 52 aa10.98□□□□□ -0.65
CSPG4P12-202ENST00000559989 COL8A2P25067 703 aa10.98□□□□□ -0.65
CSPG4P12-202ENST00000559989 NRXN2Q9P2S2 1712 aa10.98□□□□□ -0.65
CSPG4P12-202ENST00000559989 PCP2Q8IVA1 136 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 LYPD3O95274 346 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 KIR2DL5BQ8NHK3 375 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 GYPEP15421 78 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 PNRC2Q9NPJ4 139 aaKnown RBP10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 A0A0G2JMZ2 1700 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 LRRC37A2A6NM11 1700 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 LRRC37AA6NMS7 1700 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 PINLYPA6NC86 204 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 PRR20EP86478 221 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 PRR20CP86479 221 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 PRR20DP86480 221 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 PRR20BP86481 221 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 PRR20AP86496 221 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 MLST8Q9BVC4 326 aa10.97□□□□□ -0.65
CSPG4P12-202ENST00000559989 A4D1N5 150 aa10.96□□□□□ -0.65
CSPG4P12-202ENST00000559989 WDR86Q86TI4 376 aa10.96□□□□□ -0.65
CSPG4P12-202ENST00000559989 FGF23Q9GZV9 251 aaPredicted RBP10.96□□□□□ -0.65
CSPG4P12-202ENST00000559989 G3V4G9 280 aa10.96□□□□□ -0.65
CSPG4P12-202ENST00000559989 WI2-2373I1.2A0A1W2PRP0 233 aa10.96□□□□□ -0.65
CSPG4P12-202ENST00000559989 RNF223E7ERA6 249 aa10.96□□□□□ -0.65
CSPG4P12-202ENST00000559989 H3BT86 120 aa10.96□□□□□ -0.65
CSPG4P12-202ENST00000559989 UQCRQO14949 82 aa10.96□□□□□ -0.65
CSPG4P12-202ENST00000559989 NDUFC1O43677 76 aa10.96□□□□□ -0.65
CSPG4P12-202ENST00000559989 A0A087WV48 116 aa10.96□□□□□ -0.66
CSPG4P12-202ENST00000559989 LINC00643Q86TS7 51 aa10.96□□□□□ -0.66
CSPG4P12-202ENST00000559989 ARHGAP21Q5T5U3 1957 aa10.96□□□□□ -0.66
CSPG4P12-202ENST00000559989 ZNF747Q9BV97 191 aa10.95□□□□□ -0.66
CSPG4P12-202ENST00000559989 C20orf173Q96LM9 149 aa10.95□□□□□ -0.66
CSPG4P12-202ENST00000559989 LINC00205P59089 165 aa10.95□□□□□ -0.66
CSPG4P12-202ENST00000559989 SDK2Q58EX2 2172 aa10.95□□□□□ -0.66
CSPG4P12-202ENST00000559989 A0A0G2JRQ6 117 aa10.95□□□□□ -0.66
CSPG4P12-202ENST00000559989 H3BUA1 57 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms