RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 NFE4Q86UQ8 179 aa10.58□□□□□ -0.72
TPM1-211ENST00000558314 OR10G9Q8NGN4 311 aa10.58□□□□□ -0.72
TPM1-211ENST00000558314 OR10G7Q8NGN6 311 aa10.58□□□□□ -0.72
TPM1-211ENST00000558314 RASL10AQ92737 203 aa10.58□□□□□ -0.72
TPM1-211ENST00000558314 SDF2L1Q9HCN8 221 aa10.58□□□□□ -0.72
TPM1-211ENST00000558314 LENEPQ9Y5L5 61 aa10.58□□□□□ -0.72
TPM1-211ENST00000558314 TRAV4A0A0B4J268 109 aa10.57□□□□□ -0.72
TPM1-211ENST00000558314 M0R2P5 195 aa10.57□□□□□ -0.72
TPM1-211ENST00000558314 ORM1P02763 201 aa10.57□□□□□ -0.72
TPM1-211ENST00000558314 TYMSP04818 313 aa10.57□□□□□ -0.72
TPM1-211ENST00000558314 PPT1P50897 306 aa10.57□□□□□ -0.72
TPM1-211ENST00000558314 PQLC2Q6ZP29 291 aa10.57□□□□□ -0.72
TPM1-211ENST00000558314 HSD17B11Q8NBQ5 300 aa10.57□□□□□ -0.72
TPM1-211ENST00000558314 TXNDC17Q9BRA2 123 aa10.57□□□□□ -0.72
TPM1-211ENST00000558314 MSRB1Q9NZV6 116 aa10.57□□□□□ -0.72
TPM1-211ENST00000558314 ARL14EPLP0DKL9 152 aa10.56□□□□□ -0.72
TPM1-211ENST00000558314 TMED6Q8WW62 240 aa10.56□□□□□ -0.72
TPM1-211ENST00000558314 TVP23CQ96ET8 276 aa10.56□□□□□ -0.72
TPM1-211ENST00000558314 NDFIP1Q9BT67 221 aa10.56□□□□□ -0.72
TPM1-211ENST00000558314 PGPEP1Q9NXJ5 209 aa10.56□□□□□ -0.72
TPM1-211ENST00000558314 IGHV3-73A0A0B4J1V6 119 aa10.55□□□□□ -0.72
TPM1-211ENST00000558314 CRYGDP07320 174 aa10.55□□□□□ -0.72
TPM1-211ENST00000558314 CDC34P49427 236 aaPredicted RBP10.55□□□□□ -0.72
TPM1-211ENST00000558314 IQCF2Q8IXL9 164 aa10.55□□□□□ -0.72
TPM1-211ENST00000558314 ASB13Q8WXK3 278 aa10.55□□□□□ -0.72
TPM1-211ENST00000558314 A0A087WTM6 91 aa10.54□□□□□ -0.72
TPM1-211ENST00000558314 APOBP04114 4563 aaKnown RBP10.54□□□□□ -0.72
TPM1-211ENST00000558314 ALG5Q9Y673 324 aa10.54□□□□□ -0.72
TPM1-211ENST00000558314 PSCAO43653 123 aa10.53□□□□□ -0.72
TPM1-211ENST00000558314 RGS21Q2M5E4 152 aa10.53□□□□□ -0.72
TPM1-211ENST00000558314 TDRG1Q3Y452 100 aa10.53□□□□□ -0.72
TPM1-211ENST00000558314 KCNS1Q96KK3 526 aa10.53□□□□□ -0.72
TPM1-211ENST00000558314 FBLL1A6NHQ2 334 aaKnown RBP10.52□□□□□ -0.73
TPM1-211ENST00000558314 EPM2AB3EWF7 344 aa10.52□□□□□ -0.73
TPM1-211ENST00000558314 ZNF876PQ49A33 203 aa10.52□□□□□ -0.73
TPM1-211ENST00000558314 PRNTQ86SH4 94 aa10.52□□□□□ -0.73
TPM1-211ENST00000558314 TMEM75Q8N9X5 138 aa10.52□□□□□ -0.73
TPM1-211ENST00000558314 K7EQM0 130 aa10.51□□□□□ -0.73
TPM1-211ENST00000558314 GCGP01275 180 aa10.51□□□□□ -0.73
TPM1-211ENST00000558314 GATA1P15976 413 aaPredicted RBP10.51□□□□□ -0.73
TPM1-211ENST00000558314 GCHFRP30047 84 aa10.51□□□□□ -0.73
TPM1-211ENST00000558314 ZNF80P51504 273 aaPredicted RBP10.51□□□□□ -0.73
TPM1-211ENST00000558314 OR10J3Q5JRS4 329 aa10.51□□□□□ -0.73
TPM1-211ENST00000558314 CDPF1Q6NVV7 123 aa10.51□□□□□ -0.73
TPM1-211ENST00000558314 RAB24Q969Q5 203 aa10.51□□□□□ -0.73
TPM1-211ENST00000558314 Q9HAA7 133 aa10.51□□□□□ -0.73
TPM1-211ENST00000558314 PSG8Q9UQ74 426 aa10.51□□□□□ -0.73
TPM1-211ENST00000558314 IGHV3-30P01768 117 aa10.5□□□□□ -0.73
TPM1-211ENST00000558314 IGHV3-33P01772 117 aa10.5□□□□□ -0.73
TPM1-211ENST00000558314 TCRAP04437 139 aa10.5□□□□□ -0.73
TPM1-211ENST00000558314 IGHV3-30-3P0DP02 117 aa10.5□□□□□ -0.73
TPM1-211ENST00000558314 IGHV3-30-5P0DP03 117 aa10.5□□□□□ -0.73
TPM1-211ENST00000558314 KRTAP10-1P60331 282 aa10.5□□□□□ -0.73
TPM1-211ENST00000558314 SUMO1P63165 101 aaKnown RBP10.5□□□□□ -0.73
TPM1-211ENST00000558314 ZFP69Q49AA0 526 aa10.5□□□□□ -0.73
TPM1-211ENST00000558314 C10orf126Q8N4M7 172 aa10.5□□□□□ -0.73
TPM1-211ENST00000558314 C5orf17Q8NAS9 161 aa10.5□□□□□ -0.73
TPM1-211ENST00000558314 PRADC1Q9BSG0 188 aa10.5□□□□□ -0.73
TPM1-211ENST00000558314 MED28Q9H204 178 aa10.5□□□□□ -0.73
TPM1-211ENST00000558314 C11orf21Q9P2W6 132 aa10.5□□□□□ -0.73
TPM1-211ENST00000558314 TRAV8-6A0A0B4J262 113 aa10.49□□□□□ -0.73
TPM1-211ENST00000558314 IGHV3-38A0A0C4DH36 116 aa10.49□□□□□ -0.73
TPM1-211ENST00000558314 TAAR5O14804 337 aa10.49□□□□□ -0.73
TPM1-211ENST00000558314 STAG3L2P0CL84 134 aa10.49□□□□□ -0.73
TPM1-211ENST00000558314 STAG3L3P0CL85 134 aa10.49□□□□□ -0.73
TPM1-211ENST00000558314 ATP6V0CP27449 155 aa10.49□□□□□ -0.73
TPM1-211ENST00000558314 HAMPP81172 84 aa10.49□□□□□ -0.73
TPM1-211ENST00000558314 DPPA3Q6W0C5 159 aa10.49□□□□□ -0.73
TPM1-211ENST00000558314 SH2D6Q7Z4S9 175 aa10.49□□□□□ -0.73
TPM1-211ENST00000558314 SLC25A29Q8N8R3 303 aa10.49□□□□□ -0.73
TPM1-211ENST00000558314 SH3BGRL3Q9H299 93 aa10.49□□□□□ -0.73
TPM1-211ENST00000558314 SERTM2A0A1B0GWG4 89 aa10.48□□□□□ -0.73
TPM1-211ENST00000558314 PFN1P07737 140 aaKnown RBP10.48□□□□□ -0.73
TPM1-211ENST00000558314 FLI1Q01543 452 aaPredicted RBP10.48□□□□□ -0.73
TPM1-211ENST00000558314 SMUG1Q53HV7 270 aa10.48□□□□□ -0.73
TPM1-211ENST00000558314 CFAP126Q5VTH2 177 aa10.48□□□□□ -0.73
TPM1-211ENST00000558314 ACTR3CQ9C0K3 210 aaPredicted RBP10.48□□□□□ -0.73
TPM1-211ENST00000558314 TRAV34A0A0B4J273 112 aa10.47□□□□□ -0.73
TPM1-211ENST00000558314 RS1O15537 224 aa10.47□□□□□ -0.73
TPM1-211ENST00000558314 MBP02144 154 aa10.47□□□□□ -0.73
TPM1-211ENST00000558314 SMR3BP02814 79 aaPredicted RBP10.47□□□□□ -0.73
TPM1-211ENST00000558314 GCSHP23434 173 aa10.47□□□□□ -0.73
TPM1-211ENST00000558314 RHOHQ15669 191 aa10.47□□□□□ -0.73
TPM1-211ENST00000558314 ARL6IP6Q8N6S5 226 aa10.47□□□□□ -0.73
TPM1-211ENST00000558314 OR2G3Q8NGZ4 309 aa10.47□□□□□ -0.73
TPM1-211ENST00000558314 EPDR1Q9UM22 224 aa10.47□□□□□ -0.73
TPM1-211ENST00000558314 IGLV5-52A0A0A0MRZ9 124 aa10.46□□□□□ -0.73
TPM1-211ENST00000558314 PGPEP1LA6NFU8 196 aa10.46□□□□□ -0.73
TPM1-211ENST00000558314 GGTLC3B5MD39 225 aa10.46□□□□□ -0.73
TPM1-211ENST00000558314 K7EP13 123 aa10.46□□□□□ -0.73
TPM1-211ENST00000558314 CXorf1O96002 111 aa10.46□□□□□ -0.73
TPM1-211ENST00000558314 IFNA7P01567 189 aa10.46□□□□□ -0.73
TPM1-211ENST00000558314 INAFM2P0DMQ5 153 aa10.46□□□□□ -0.73
TPM1-211ENST00000558314 S100A4P26447 101 aaKnown RBP10.46□□□□□ -0.73
TPM1-211ENST00000558314 XGP55808 180 aa10.46□□□□□ -0.73
TPM1-211ENST00000558314 UBE2G2P60604 165 aa10.46□□□□□ -0.73
TPM1-211ENST00000558314 ZNF506Q5JVG8 444 aa10.46□□□□□ -0.73
TPM1-211ENST00000558314 CYB561D1Q8N8Q1 229 aa10.46□□□□□ -0.73
TPM1-211ENST00000558314 FRZBQ92765 325 aa10.46□□□□□ -0.73
TPM1-211ENST00000558314 LINC00479Q96M42 142 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms