RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
PCNX4-213ENST00000556907 DAZAP1Q96EP5 407 aaKnown RBP11.94□□□□□ -0.5
PCNX4-213ENST00000556907 TRAV21A0A0B4J279 112 aa11.93□□□□□ -0.5
PCNX4-213ENST00000556907 FABP5P3A8MUU1 101 aa11.93□□□□□ -0.5
PCNX4-213ENST00000556907 M0R2Z0 102 aa11.93□□□□□ -0.5
PCNX4-213ENST00000556907 LINC01559Q495D7 138 aa11.93□□□□□ -0.5
PCNX4-213ENST00000556907 GFI1BQ5VTD9 330 aa11.93□□□□□ -0.5
PCNX4-213ENST00000556907 OR11H2Q8NH07 326 aa11.93□□□□□ -0.5
PCNX4-213ENST00000556907 C20orf144Q9BQM9 153 aa11.93□□□□□ -0.5
PCNX4-213ENST00000556907 RETNQ9HD89 108 aa11.93□□□□□ -0.5
PCNX4-213ENST00000556907 GOLT1BQ9Y3E0 138 aa11.93□□□□□ -0.5
PCNX4-213ENST00000556907 SMIM9A6NGZ8 99 aa11.92□□□□□ -0.5
PCNX4-213ENST00000556907 ZNF705GA8MUZ8 300 aaPredicted RBP11.92□□□□□ -0.5
PCNX4-213ENST00000556907 J3KRW8 73 aa11.92□□□□□ -0.5
PCNX4-213ENST00000556907 KIR3DS1Q14943 382 aa11.92□□□□□ -0.5
PCNX4-213ENST00000556907 NEU1Q99519 415 aa11.92□□□□□ -0.5
PCNX4-213ENST00000556907 HUWE1Q7Z6Z7 4374 aaKnown RBP11.92□□□□□ -0.5
PCNX4-213ENST00000556907 CXorf65A6NEN9 183 aa11.91□□□□□ -0.5
PCNX4-213ENST00000556907 CRXO43186 299 aaPredicted RBP11.91□□□□□ -0.5
PCNX4-213ENST00000556907 SCO1O75880 301 aa11.91□□□□□ -0.5
PCNX4-213ENST00000556907 INSP01308 110 aa11.91□□□□□ -0.5
PCNX4-213ENST00000556907 CXCL1P09341 107 aa11.91□□□□□ -0.5
PCNX4-213ENST00000556907 MIFP14174 115 aa11.91□□□□□ -0.5
PCNX4-213ENST00000556907 RNASE4P34096 147 aaKnown RBP11.91□□□□□ -0.5
PCNX4-213ENST00000556907 FXYD7P58549 80 aa11.91□□□□□ -0.5
PCNX4-213ENST00000556907 ZNF705AQ6ZN79 300 aaPredicted RBP11.91□□□□□ -0.5
PCNX4-213ENST00000556907 TMEM256Q8N2U0 113 aa11.91□□□□□ -0.5
PCNX4-213ENST00000556907 IMMP2LQ96T52 175 aa11.91□□□□□ -0.5
PCNX4-213ENST00000556907 IL36BQ9NZH7 164 aa11.91□□□□□ -0.5
PCNX4-213ENST00000556907 RPS20P60866 119 aaKnown RBP11.9□□□□□ -0.5
PCNX4-213ENST00000556907 CBLN2Q8IUK8 224 aa11.9□□□□□ -0.5
PCNX4-213ENST00000556907 OR2D3Q8NGH3 330 aa11.9□□□□□ -0.5
PCNX4-213ENST00000556907 SMCO4Q9NRQ5 59 aa11.9□□□□□ -0.5
PCNX4-213ENST00000556907 C11orf21Q9P2W6 132 aa11.9□□□□□ -0.5
PCNX4-213ENST00000556907 TRAV12-2A0A075B6T6 113 aa11.89□□□□□ -0.51
PCNX4-213ENST00000556907 TMEM189A5PLL7 270 aa11.89□□□□□ -0.51
PCNX4-213ENST00000556907 ZNF324O75467 553 aaPredicted RBP11.89□□□□□ -0.51
PCNX4-213ENST00000556907 TSKUQ8WUA8 353 aa11.89□□□□□ -0.51
PCNX4-213ENST00000556907 WWC2-AS2Q96NR7 200 aa11.89□□□□□ -0.51
PCNX4-213ENST00000556907 GFRA4Q9GZZ7 299 aa11.89□□□□□ -0.51
PCNX4-213ENST00000556907 TRAV12-3A0A0B4J271 114 aa11.88□□□□□ -0.51
PCNX4-213ENST00000556907 SMIM27A0A1W2PRY6 76 aa11.88□□□□□ -0.51
PCNX4-213ENST00000556907 FAM231BA6NCW3 169 aa11.88□□□□□ -0.51
PCNX4-213ENST00000556907 A8MWL6 223 aa11.88□□□□□ -0.51
PCNX4-213ENST00000556907 RPL19P84098 196 aaKnown RBP11.88□□□□□ -0.51
PCNX4-213ENST00000556907 TMEM88Q6PEY1 159 aa11.88□□□□□ -0.51
PCNX4-213ENST00000556907 TMEM208Q9BTX3 173 aa11.88□□□□□ -0.51
PCNX4-213ENST00000556907 EDA2RQ9HAV5 297 aa11.88□□□□□ -0.51
PCNX4-213ENST00000556907 TRAV9-1A0A075B6T8 112 aa11.87□□□□□ -0.51
PCNX4-213ENST00000556907 IGKV3D-20A0A0C4DH25 116 aa11.87□□□□□ -0.51
PCNX4-213ENST00000556907 XKRY2A2RUG3 117 aa11.87□□□□□ -0.51
PCNX4-213ENST00000556907 ORM1P02763 201 aa11.87□□□□□ -0.51
PCNX4-213ENST00000556907 RBMY1A1P0DJD3 496 aaKnown RBP11.87□□□□□ -0.51
PCNX4-213ENST00000556907 RBMY1CP0DJD4 496 aa11.87□□□□□ -0.51
PCNX4-213ENST00000556907 RBMY1FQ15415 496 aaKnown RBP11.87□□□□□ -0.51
PCNX4-213ENST00000556907 TDRG1Q3Y452 100 aa11.87□□□□□ -0.51
PCNX4-213ENST00000556907 KCNIP4Q6PIL6 250 aa11.87□□□□□ -0.51
PCNX4-213ENST00000556907 Q6ZQT7 251 aa11.87□□□□□ -0.51
PCNX4-213ENST00000556907 C1orf158Q8N1D5 194 aa11.87□□□□□ -0.51
PCNX4-213ENST00000556907 YPEL4Q96NS1 127 aa11.87□□□□□ -0.51
PCNX4-213ENST00000556907 C11orf68Q9H3H3 251 aaKnown RBP11.87□□□□□ -0.51
PCNX4-213ENST00000556907 X6R8D5 127 aa11.87□□□□□ -0.51
PCNX4-213ENST00000556907 TENM3Q9P273 2699 aa11.87□□□□□ -0.51
PCNX4-213ENST00000556907 S100PP25815 95 aa11.86□□□□□ -0.51
PCNX4-213ENST00000556907 IL17DQ8TAD2 202 aa11.86□□□□□ -0.51
PCNX4-213ENST00000556907 KCNS1Q96KK3 526 aa11.86□□□□□ -0.51
PCNX4-213ENST00000556907 LINC00467Q9BRT7 94 aa11.86□□□□□ -0.51
PCNX4-213ENST00000556907 NAGKQ9UJ70 344 aa11.86□□□□□ -0.51
PCNX4-213ENST00000556907 MUC4Q99102 2169 aa11.86□□□□□ -0.51
PCNX4-213ENST00000556907 STAB2Q8WWQ8 2551 aa11.86□□□□□ -0.51
PCNX4-213ENST00000556907 ANXA2RQ3ZCQ2 193 aa11.85□□□□□ -0.51
PCNX4-213ENST00000556907 DNLZQ5SXM8 178 aa11.85□□□□□ -0.51
PCNX4-213ENST00000556907 Q8NAQ8 132 aa11.85□□□□□ -0.51
PCNX4-213ENST00000556907 PYGO2Q9BRQ0 406 aa11.85□□□□□ -0.51
PCNX4-213ENST00000556907 IGHV3OR16-12A0A075B7B8 117 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 IGHV1OR15-1A0A075B7D0 117 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 TMSB15BA0A087X1C1 80 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 IGLC6P0CF74 106 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 MED14OSP0DP75 135 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 CTRLP40313 264 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 ELOBQ15370 118 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 RRN3P1Q2M238 152 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 MUC21Q5SSG8 566 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 FAM159AQ6UWV7 190 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 ZNF575Q86XF7 245 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 GTSF1Q8WW33 167 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 LINC01587Q99440 93 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 NAT8BQ9UHF3 227 aa11.84□□□□□ -0.51
PCNX4-213ENST00000556907 IGHV4-28A0A0C4DH34 117 aa11.83□□□□□ -0.52
PCNX4-213ENST00000556907 A0A0J9YWU9 116 aa11.83□□□□□ -0.52
PCNX4-213ENST00000556907 HIGD1CA8MV81 97 aa11.83□□□□□ -0.52
PCNX4-213ENST00000556907 TYMSP04818 313 aa11.83□□□□□ -0.52
PCNX4-213ENST00000556907 GZMBP10144 247 aa11.83□□□□□ -0.52
PCNX4-213ENST00000556907 FOXA3P55318 350 aaPredicted RBP11.83□□□□□ -0.52
PCNX4-213ENST00000556907 TCL1AP56279 114 aa11.83□□□□□ -0.52
PCNX4-213ENST00000556907 BTF3L4Q96K17 158 aa11.83□□□□□ -0.52
PCNX4-213ENST00000556907 URGCP-MRPS24S4R325 110 aa11.83□□□□□ -0.52
PCNX4-213ENST00000556907 TRGV11A0A075B6L2 103 aa11.82□□□□□ -0.52
PCNX4-213ENST00000556907 TRBV24-1A0A075B6N3 115 aa11.82□□□□□ -0.52
PCNX4-213ENST00000556907 A0A1W2PPQ1 181 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms