RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 LINC01559Q495D7 138 aa9.01□□□□□ -0.97
SHMT2-221ENST00000555773 MUC21Q5SSG8 566 aa9.01□□□□□ -0.97
SHMT2-221ENST00000555773 FAM231DQ6ZW35 169 aa9.01□□□□□ -0.97
SHMT2-221ENST00000555773 C11orf21Q9P2W6 132 aa9.01□□□□□ -0.97
SHMT2-221ENST00000555773 TRGV11A0A075B6L2 103 aa9□□□□□ -0.97
SHMT2-221ENST00000555773 IGKV3D-20A0A0C4DH25 116 aa9□□□□□ -0.97
SHMT2-221ENST00000555773 TMEM189A5PLL7 270 aa9□□□□□ -0.97
SHMT2-221ENST00000555773 KRBOX1C9JBD0 128 aa9□□□□□ -0.97
SHMT2-221ENST00000555773 P01737 135 aa9□□□□□ -0.97
SHMT2-221ENST00000555773 C10orf91Q5T1B1 145 aa9□□□□□ -0.97
SHMT2-221ENST00000555773 NUDT10Q8NFP7 164 aa9□□□□□ -0.97
SHMT2-221ENST00000555773 NUDT11Q96G61 164 aa9□□□□□ -0.97
SHMT2-221ENST00000555773 C16orf74Q96GX8 76 aa9□□□□□ -0.97
SHMT2-221ENST00000555773 RETNQ9HD89 108 aa9□□□□□ -0.97
SHMT2-221ENST00000555773 NAGKQ9UJ70 344 aa9□□□□□ -0.97
SHMT2-221ENST00000555773 TP53TG3Q9ULZ0 132 aa9□□□□□ -0.97
SHMT2-221ENST00000555773 XKRY2A2RUG3 117 aa8.99□□□□□ -0.97
SHMT2-221ENST00000555773 B4DEV8 164 aa8.99□□□□□ -0.97
SHMT2-221ENST00000555773 AZU1P20160 251 aa8.99□□□□□ -0.97
SHMT2-221ENST00000555773 ERVFC1-1P60608 527 aa8.99□□□□□ -0.97
SHMT2-221ENST00000555773 RPS20P60866 119 aaKnown RBP8.99□□□□□ -0.97
SHMT2-221ENST00000555773 ADIRFQ15847 76 aa8.99□□□□□ -0.97
SHMT2-221ENST00000555773 IBA57Q5T440 356 aaKnown RBP8.99□□□□□ -0.97
SHMT2-221ENST00000555773 SLC7A5P1Q8MH63 180 aa8.99□□□□□ -0.97
SHMT2-221ENST00000555773 TMEM263Q8WUH6 116 aaKnown RBP8.99□□□□□ -0.97
SHMT2-221ENST00000555773 ISOC2Q96AB3 205 aa8.99□□□□□ -0.97
SHMT2-221ENST00000555773 OSTCQ9NRP0 149 aa8.99□□□□□ -0.97
SHMT2-221ENST00000555773 IGHV4-28A0A0C4DH34 117 aa8.98□□□□□ -0.97
SHMT2-221ENST00000555773 M0R036 132 aa8.98□□□□□ -0.97
SHMT2-221ENST00000555773 GNRH2O43555 120 aa8.98□□□□□ -0.97
SHMT2-221ENST00000555773 PRM2P04554 102 aa8.98□□□□□ -0.97
SHMT2-221ENST00000555773 CXCL1P09341 107 aa8.98□□□□□ -0.97
SHMT2-221ENST00000555773 ADCYAP1P18509 176 aa8.98□□□□□ -0.97
SHMT2-221ENST00000555773 DNLZQ5SXM8 178 aa8.98□□□□□ -0.97
SHMT2-221ENST00000555773 C15orf54Q8N8G6 183 aa8.98□□□□□ -0.97
SHMT2-221ENST00000555773 Q8NAQ8 132 aa8.98□□□□□ -0.97
SHMT2-221ENST00000555773 OR2D3Q8NGH3 330 aa8.98□□□□□ -0.97
SHMT2-221ENST00000555773 RNASE8Q8TDE3 154 aaKnown RBP8.98□□□□□ -0.97
SHMT2-221ENST00000555773 RNASE7Q9H1E1 156 aaKnown RBP8.98□□□□□ -0.97
SHMT2-221ENST00000555773 CARHSP1Q9Y2V2 147 aaKnown RBP8.98□□□□□ -0.97
SHMT2-221ENST00000555773 PRKDCP78527 4128 aaKnown RBP8.98□□□□□ -0.97
SHMT2-221ENST00000555773 HUWE1Q7Z6Z7 4374 aaKnown RBP8.97□□□□□ -0.97
SHMT2-221ENST00000555773 IGHV3-16A0A0C4DH30 117 aa8.97□□□□□ -0.97
SHMT2-221ENST00000555773 GATCO43716 136 aaKnown RBP8.97□□□□□ -0.97
SHMT2-221ENST00000555773 TYMSP04818 313 aa8.97□□□□□ -0.97
SHMT2-221ENST00000555773 ASIPP42127 132 aa8.97□□□□□ -0.97
SHMT2-221ENST00000555773 ZNF575Q86XF7 245 aa8.97□□□□□ -0.97
SHMT2-221ENST00000555773 SFRP2Q96HF1 295 aa8.97□□□□□ -0.97
SHMT2-221ENST00000555773 SPXQ9BT56 116 aa8.97□□□□□ -0.97
SHMT2-221ENST00000555773 C11orf68Q9H3H3 251 aaKnown RBP8.97□□□□□ -0.97
SHMT2-221ENST00000555773 RPP21Q9H633 154 aaKnown RBP8.97□□□□□ -0.97
SHMT2-221ENST00000555773 A8MWL6 223 aa8.96□□□□□ -0.98
SHMT2-221ENST00000555773 SNURFLB1AK76 121 aa8.96□□□□□ -0.98
SHMT2-221ENST00000555773 PPP1R2P9O14990 202 aa8.96□□□□□ -0.98
SHMT2-221ENST00000555773 S100A4P26447 101 aaKnown RBP8.96□□□□□ -0.98
SHMT2-221ENST00000555773 TCL1AP56279 114 aa8.96□□□□□ -0.98
SHMT2-221ENST00000555773 ZNF415Q09FC8 603 aa8.96□□□□□ -0.98
SHMT2-221ENST00000555773 DAZ2Q13117 558 aaKnown RBP8.96□□□□□ -0.98
SHMT2-221ENST00000555773 CT83Q5H943 113 aa8.96□□□□□ -0.98
SHMT2-221ENST00000555773 C11orf72Q8NBR9 251 aa8.96□□□□□ -0.98
SHMT2-221ENST00000555773 OR10G8Q8NGN5 311 aa8.96□□□□□ -0.98
SHMT2-221ENST00000555773 GSN-AS1Q9NRJ2 163 aa8.96□□□□□ -0.98
SHMT2-221ENST00000555773 MDFICQ9P1T7 246 aa8.96□□□□□ -0.98
SHMT2-221ENST00000555773 TIMM8BQ9Y5J9 83 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-221ENST00000555773 TMSB15BA0A087X1C1 80 aa8.95□□□□□ -0.98
SHMT2-221ENST00000555773 TEX48A0A1B0GUV7 120 aa8.95□□□□□ -0.98
SHMT2-221ENST00000555773 PLAC8L1A1L4L8 177 aa8.95□□□□□ -0.98
SHMT2-221ENST00000555773 GRIFINA4D1Z8 144 aa8.95□□□□□ -0.98
SHMT2-221ENST00000555773 MT-ND4LP03901 98 aa8.95□□□□□ -0.98
SHMT2-221ENST00000555773 MED14OSP0DP75 135 aa8.95□□□□□ -0.98
SHMT2-221ENST00000555773 IL36BQ9NZH7 164 aa8.95□□□□□ -0.98
SHMT2-221ENST00000555773 U3KQK5 164 aa8.95□□□□□ -0.98
SHMT2-221ENST00000555773 A0A1W2PPQ1 181 aa8.94□□□□□ -0.98
SHMT2-221ENST00000555773 FAM231BA6NCW3 169 aa8.94□□□□□ -0.98
SHMT2-221ENST00000555773 LYRM9A8MSI8 78 aa8.94□□□□□ -0.98
SHMT2-221ENST00000555773 SPART-AS1P0CW21 52 aa8.94□□□□□ -0.98
SHMT2-221ENST00000555773 EMP1P54849 157 aa8.94□□□□□ -0.98
SHMT2-221ENST00000555773 RPL19P84098 196 aaKnown RBP8.94□□□□□ -0.98
SHMT2-221ENST00000555773 PTH2Q96A98 100 aa8.94□□□□□ -0.98
SHMT2-221ENST00000555773 ANAPC16Q96DE5 110 aa8.94□□□□□ -0.98
SHMT2-221ENST00000555773 V9GYV3 84 aa8.94□□□□□ -0.98
SHMT2-221ENST00000555773 A0A0J9YWU9 116 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 F2Z2F3 143 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 M0R2P5 195 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 DEFB4AO15263 64 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 APOC3P02656 99 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 OR5AL1P0C617 328 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 ARMS2P0C7Q2 107 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 RNASE3P12724 160 aaKnown RBP8.93□□□□□ -0.98
SHMT2-221ENST00000555773 FOXA3P55318 350 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-221ENST00000555773 LGALS9BQ3B8N2 356 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 SVBPQ8N300 66 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 IL17DQ8TAD2 202 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 TSKUQ8WUA8 353 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 C9orf85Q96MD7 179 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 SSBP4Q9BWG4 385 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-221ENST00000555773 GFRA4Q9GZZ7 299 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 NOP10Q9NPE3 64 aaKnown RBP8.93□□□□□ -0.98
SHMT2-221ENST00000555773 SCRT2Q9NQ03 307 aa8.93□□□□□ -0.98
SHMT2-221ENST00000555773 CXorf65A6NEN9 183 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms