RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ASPHD1Q5U4P2 390 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 TLN1Q9Y490 2541 aaKnown RBP5.51□□□□□ -1.53
SYNE2-216ENST00000555002 GAGE12HA6NDE8 117 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 F6UB75 175 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 C5orf38Q86SI9 138 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 GTSF1Q8WW33 167 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 RHOHQ15669 191 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 MLANAQ16655 118 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 FAM120AOSQ5T036 256 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 NPBQ8NG41 125 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 SRSF8Q9BRL6 282 aaKnown RBP5.51□□□□□ -1.53
SYNE2-216ENST00000555002 COL24A1Q17RW2 1714 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 IGKV1D-17A0A075B6S4 117 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 CTSGP08311 255 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 IGKV1-12A0A0C4DH73 117 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 WDR86Q86TI4 376 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 Q9H8V8 135 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 PIFOQ8TCI5 191 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 REG4Q9BYZ8 158 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 CCL24O00175 119 aa5.51□□□□□ -1.53
SYNE2-216ENST00000555002 KLK5Q9Y337 293 aaPredicted RBP5.51□□□□□ -1.53
SYNE2-216ENST00000555002 IGKV1-16P04430 117 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 ZSWIM8A7E2V4 1837 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 IGHV7-4-1A0A0J9YVY3 117 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 IGHV4-59P01825 116 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 MST1P26927 711 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 NMSQ5H8A3 153 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 SLC25A29Q8N8R3 303 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 H0YIZ8 118 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 ETV2O00321 342 aaPredicted RBP5.5□□□□□ -1.53
SYNE2-216ENST00000555002 PCNX3Q9H6A9 2034 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 A0A0G2JMZ2 1700 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 LRRC37A2A6NM11 1700 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 WIPF3A6NGB9 483 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 UBE2V1Q13404 147 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 SLURP1P55000 103 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 PLXNA3P51805 1871 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 MPZP25189 248 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 FOXE3Q13461 319 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 IGFBPL1Q8WX77 278 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 TMEM14BQ9NUH8 114 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 LYPD1Q8N2G4 141 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 B9D2Q9BPU9 175 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 NRXN2Q9P2S2 1712 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 PRSS46E5RG02 174 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 GP9P14770 177 aa5.5□□□□□ -1.53
SYNE2-216ENST00000555002 SHISA3A0PJX4 238 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 APRG1Q8IVJ8 170 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 J3QQQ9 107 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 DLEU1O43261 78 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 Q6P435 159 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 NTN3O00634 580 aaPredicted RBP5.49□□□□□ -1.53
SYNE2-216ENST00000555002 WFDC11Q8NEX6 87 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 C15orf62A8K5M9 175 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 NDUFA4O00483 81 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 COX7A2LO14548 114 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 MUSTN1Q8IVN3 82 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 PDE6HQ13956 83 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 NREPQ16612 68 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 FN1P02751 2386 aaKnown RBP5.49□□□□□ -1.53
SYNE2-216ENST00000555002 ZFP36L1Q07352 338 aaKnown RBP5.49□□□□□ -1.53
SYNE2-216ENST00000555002 LY6G6FQ5SQ64 297 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 LAIR2Q6ISS4 152 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 AMTNQ6UX39 209 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 C9orf66Q5T8R8 295 aa5.49□□□□□ -1.53
SYNE2-216ENST00000555002 PRO1854Q9UHT4 67 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 C9orf118A6NHY6 69 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 CEND1Q8N111 149 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 TNS1Q9HBL0 1735 aaKnown RBP5.48□□□□□ -1.53
SYNE2-216ENST00000555002 IGLV3-32A0A0A0MS00 114 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 LOC105371267A0A1B0GV96 52 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 K7ERS5 55 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 NDUFC2O95298 119 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 CRYGSP22914 178 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 C1orf194Q5T5A4 169 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 MRPL53Q96EL3 112 aaKnown RBP5.48□□□□□ -1.53
SYNE2-216ENST00000555002 SPANXDQ9BXN6 97 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 SPRY2O43597 315 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 NUP210LQ5VU65 1888 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 BVES-AS1Q5T3Y7 98 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 GPHB5Q86YW7 130 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 DYNAPQ8N1N2 210 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 ZNF581Q9P0T4 197 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 SS18L2Q9UHA2 77 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 NOTCH4Q99466 2003 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 GFI1Q99684 422 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 C5orf63A6NC05 138 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 LTAP01374 205 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 SPART-AS1P0CW21 52 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 HIST2H2BCQ6DN03 193 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 GFRA4Q9GZZ7 299 aa5.48□□□□□ -1.53
SYNE2-216ENST00000555002 IGKV2-24A0A0C4DH68 120 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 IGKV1-6A0A0C4DH72 117 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 J3QLI3 93 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 NCOR1P1Q9H4R4 102 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 SIGLEC8Q9NYZ4 499 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 GNRH2O43555 120 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 SLAQ13239 276 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 K7EP34 96 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 TRAV1-1A0A0B4J248 108 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms