RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 K7EMI3 77 aa11.03□□□□□ -0.64
VTI1B-204ENST00000554659 GAGE6Q13070 117 aa11.03□□□□□ -0.64
VTI1B-204ENST00000554659 HELZP42694 1942 aaKnown RBP11.03□□□□□ -0.64
VTI1B-204ENST00000554659 F5H768 121 aa11.03□□□□□ -0.64
VTI1B-204ENST00000554659 TICRRQ7Z2Z1 1910 aa11.03□□□□□ -0.64
VTI1B-204ENST00000554659 Q6ZVH6 145 aa11.03□□□□□ -0.64
VTI1B-204ENST00000554659 TMEM243Q9BU79 118 aa11.03□□□□□ -0.64
VTI1B-204ENST00000554659 FAM215AQ9Y5M1 114 aa11.03□□□□□ -0.64
VTI1B-204ENST00000554659 TMEM258P61165 79 aa11.02□□□□□ -0.65
VTI1B-204ENST00000554659 MGAMO43451 1857 aa11.02□□□□□ -0.65
VTI1B-204ENST00000554659 RBAKDNA6NC62 111 aa11.02□□□□□ -0.65
VTI1B-204ENST00000554659 FAM120AOSQ5T036 256 aa11.02□□□□□ -0.65
VTI1B-204ENST00000554659 MRPL53Q96EL3 112 aaKnown RBP11.02□□□□□ -0.65
VTI1B-204ENST00000554659 TRAV12-2A0A075B6T6 113 aa11.02□□□□□ -0.65
VTI1B-204ENST00000554659 TRAV13-2A0A0B4J235 113 aa11.02□□□□□ -0.65
VTI1B-204ENST00000554659 SS18L2Q9UHA2 77 aa11.02□□□□□ -0.65
VTI1B-204ENST00000554659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.02□□□□□ -0.65
VTI1B-204ENST00000554659 hADV29S1A0JD25 119 aa11.01□□□□□ -0.65
VTI1B-204ENST00000554659 ZNF493Q6ZR52 646 aa11.01□□□□□ -0.65
VTI1B-204ENST00000554659 SHANK1Q9Y566 2161 aa11.01□□□□□ -0.65
VTI1B-204ENST00000554659 PLA2G2EQ9NZK7 142 aa11.01□□□□□ -0.65
VTI1B-204ENST00000554659 FGF23Q9GZV9 251 aaPredicted RBP11.01□□□□□ -0.65
VTI1B-204ENST00000554659 IGHV7-4-1A0A0J9YVY3 117 aa11□□□□□ -0.65
VTI1B-204ENST00000554659 RNF114Q9Y508 228 aa11□□□□□ -0.65
VTI1B-204ENST00000554659 DEFB125Q8N687 156 aa11□□□□□ -0.65
VTI1B-204ENST00000554659 LENEPQ9Y5L5 61 aa11□□□□□ -0.65
VTI1B-204ENST00000554659 C17orf77Q96MU5 243 aa11□□□□□ -0.65
VTI1B-204ENST00000554659 YLPM1P49750 1951 aaKnown RBP11□□□□□ -0.65
VTI1B-204ENST00000554659 H3BUA1 57 aa11□□□□□ -0.65
VTI1B-204ENST00000554659 EGR2P11161 476 aaPredicted RBP11□□□□□ -0.65
VTI1B-204ENST00000554659 DAD1P61803 113 aa11□□□□□ -0.65
VTI1B-204ENST00000554659 RNASE13Q5GAN3 156 aaKnown RBP11□□□□□ -0.65
VTI1B-204ENST00000554659 CRYGCP07315 174 aa10.99□□□□□ -0.65
VTI1B-204ENST00000554659 PRSS29PA6NIE9 313 aa10.99□□□□□ -0.65
VTI1B-204ENST00000554659 CFC1BP0CG36 223 aa10.99□□□□□ -0.65
VTI1B-204ENST00000554659 CFC1P0CG37 223 aa10.99□□□□□ -0.65
VTI1B-204ENST00000554659 DYNAPQ8N1N2 210 aa10.99□□□□□ -0.65
VTI1B-204ENST00000554659 ANAPC1Q9H1A4 1944 aa10.99□□□□□ -0.65
VTI1B-204ENST00000554659 PLXND1Q9Y4D7 1925 aa10.99□□□□□ -0.65
VTI1B-204ENST00000554659 PRB1P04280 392 aa10.99□□□□□ -0.65
VTI1B-204ENST00000554659 UNQ6494/PRO21346Q6UXR6 183 aa10.99□□□□□ -0.65
VTI1B-204ENST00000554659 HERVK_113P63121 156 aa10.98□□□□□ -0.65
VTI1B-204ENST00000554659 NBL1P41271 181 aa10.98□□□□□ -0.65
VTI1B-204ENST00000554659 C5orf47Q569G3 176 aa10.98□□□□□ -0.65
VTI1B-204ENST00000554659 PLA2G2CQ5R387 149 aa10.98□□□□□ -0.65
VTI1B-204ENST00000554659 RHOHQ15669 191 aa10.98□□□□□ -0.65
VTI1B-204ENST00000554659 LHBP01229 141 aa10.98□□□□□ -0.65
VTI1B-204ENST00000554659 GP9P14770 177 aa10.98□□□□□ -0.65
VTI1B-204ENST00000554659 AGPAT4-IT1Q9H0P7 198 aa10.98□□□□□ -0.65
VTI1B-204ENST00000554659 DOCK8Q8NF50 2099 aa10.97□□□□□ -0.65
VTI1B-204ENST00000554659 PCP2Q8IVA1 136 aa10.97□□□□□ -0.65
VTI1B-204ENST00000554659 CFHR4Q92496 578 aa10.97□□□□□ -0.65
VTI1B-204ENST00000554659 IGF2BP2-AS1Q96M15 143 aa10.97□□□□□ -0.65
VTI1B-204ENST00000554659 SHISA9B4DS77 424 aa10.97□□□□□ -0.65
VTI1B-204ENST00000554659 CTSZQ9UBR2 303 aa10.97□□□□□ -0.65
VTI1B-204ENST00000554659 SH2D6Q7Z4S9 175 aa10.96□□□□□ -0.65
VTI1B-204ENST00000554659 C1orf43Q9BWL3 253 aa10.96□□□□□ -0.65
VTI1B-204ENST00000554659 BAALC-AS2P0C853 105 aa10.96□□□□□ -0.65
VTI1B-204ENST00000554659 RNF223E7ERA6 249 aa10.96□□□□□ -0.66
VTI1B-204ENST00000554659 J3QLI3 93 aa10.96□□□□□ -0.66
VTI1B-204ENST00000554659 NUPR1O60356 82 aa10.95□□□□□ -0.66
VTI1B-204ENST00000554659 SMIM20Q8N5G0 67 aa10.95□□□□□ -0.66
VTI1B-204ENST00000554659 TEX48A0A1B0GUV7 120 aa10.95□□□□□ -0.66
VTI1B-204ENST00000554659 C22orf46C9J442 243 aa10.95□□□□□ -0.66
VTI1B-204ENST00000554659 LINC01545Q5VT33 79 aa10.95□□□□□ -0.66
VTI1B-204ENST00000554659 PLCE1Q9P212 2302 aa10.95□□□□□ -0.66
VTI1B-204ENST00000554659 ELANEP08246 267 aa10.94□□□□□ -0.66
VTI1B-204ENST00000554659 TANC1Q9C0D5 1861 aa10.94□□□□□ -0.66
VTI1B-204ENST00000554659 A0A096LPF7 62 aa10.94□□□□□ -0.66
VTI1B-204ENST00000554659 FOXE3Q13461 319 aa10.94□□□□□ -0.66
VTI1B-204ENST00000554659 CLPSL2Q6UWE3 100 aa10.94□□□□□ -0.66
VTI1B-204ENST00000554659 ANGP03950 147 aaKnown RBP10.94□□□□□ -0.66
VTI1B-204ENST00000554659 FOXI2Q6ZQN5 318 aa10.94□□□□□ -0.66
VTI1B-204ENST00000554659 I3L2K1 104 aa10.94□□□□□ -0.66
VTI1B-204ENST00000554659 HOXB4P17483 251 aaPredicted RBP10.94□□□□□ -0.66
VTI1B-204ENST00000554659 SPANXCQ9NY87 97 aa10.94□□□□□ -0.66
VTI1B-204ENST00000554659 NDUFS5O43920 106 aa10.93□□□□□ -0.66
VTI1B-204ENST00000554659 MED13LQ71F56 2210 aa10.93□□□□□ -0.66
VTI1B-204ENST00000554659 PATE2Q6UY27 113 aa10.93□□□□□ -0.66
VTI1B-204ENST00000554659 NPBQ8NG41 125 aa10.93□□□□□ -0.66
VTI1B-204ENST00000554659 Q9H8V8 135 aa10.92□□□□□ -0.66
VTI1B-204ENST00000554659 ORMDL1Q9P0S3 153 aa10.92□□□□□ -0.66
VTI1B-204ENST00000554659 FRMPD3Q5JV73 1810 aa10.92□□□□□ -0.66
VTI1B-204ENST00000554659 KIAA1671Q9BY89 1806 aa10.92□□□□□ -0.66
VTI1B-204ENST00000554659 GNRH2O43555 120 aa10.92□□□□□ -0.66
VTI1B-204ENST00000554659 K7EIM0 57 aa10.91□□□□□ -0.66
VTI1B-204ENST00000554659 IGKV1-17P01599 117 aa10.91□□□□□ -0.66
VTI1B-204ENST00000554659 FAM167A-AS1Q96KT0 104 aa10.91□□□□□ -0.66
VTI1B-204ENST00000554659 IGLL5B9A064 214 aa10.9□□□□□ -0.66
VTI1B-204ENST00000554659 PRB2P02812 416 aaPredicted RBP10.9□□□□□ -0.66
VTI1B-204ENST00000554659 DEFB105AQ8NG35 78 aa10.9□□□□□ -0.66
VTI1B-204ENST00000554659 PCNX2A6NKB5 2137 aa10.9□□□□□ -0.66
VTI1B-204ENST00000554659 XCL1P47992 114 aa10.9□□□□□ -0.66
VTI1B-204ENST00000554659 TDRG1Q3Y452 100 aa10.9□□□□□ -0.66
VTI1B-204ENST00000554659 SPRNQ5BIV9 151 aa10.9□□□□□ -0.66
VTI1B-204ENST00000554659 SP5Q6BEB4 398 aaPredicted RBP10.9□□□□□ -0.66
VTI1B-204ENST00000554659 IGLV11-55A0A075B6I3 123 aa10.9□□□□□ -0.66
VTI1B-204ENST00000554659 F6UB75 175 aa10.9□□□□□ -0.66
VTI1B-204ENST00000554659 ACYP1P07311 99 aa10.9□□□□□ -0.66
VTI1B-204ENST00000554659 GATA1P15976 413 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms