RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 LRTM2Q8N967 370 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 OR10P1Q8NGE3 313 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 Q8TAT8 98 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 RAB2BQ8WUD1 216 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 BLNKQ8WV28 456 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 SMIM4Q8WVI0 70 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 BAALCQ8WXS3 180 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 FAM167A-AS1Q96KT0 104 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 TMEM147Q9BVK8 224 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 ARL6Q9H0F7 186 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 DAZ3Q9NR90 486 aaKnown RBP2□□□□□ -2.09
SLIRP-202ENST00000553981 PRO0255Q9UI72 69 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 RABL2BQ9UNT1 228 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 FLVCR2Q9UPI3 526 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 C14orf166Q9Y224 244 aaKnown RBP2□□□□□ -2.09
SLIRP-202ENST00000553981 RCL1Q9Y2P8 373 aaKnown RBP2□□□□□ -2.09
SLIRP-202ENST00000553981 TRBV19A0A075B6N1 114 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 TRGV2A0A075B6R0 118 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 IGHV1OR15-1A0A075B7D0 117 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 IGHV3-38A0A0C4DH36 116 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 SMCO3A2RU48 225 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 RNF222A6NCQ9 220 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 DISC1C4P0D8 188 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 K7EPK0 472 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 AGPAT2O15120 278 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 HYPMO75409 117 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 ATG12O94817 140 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 SLC25A5P05141 298 aaKnown RBP1.99□□□□□ -2.09
SLIRP-202ENST00000553981 AKAIN1P0CW23 69 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 S100GP29377 79 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 BTCP35070 178 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 NUP62P37198 522 aaPredicted RBP1.99□□□□□ -2.09
SLIRP-202ENST00000553981 RAB11AP62491 216 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 AKR1C1Q04828 323 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 MRPL23Q16540 153 aaKnown RBP1.99□□□□□ -2.09
SLIRP-202ENST00000553981 LINC01556Q5JQF7 62 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 IBA57Q5T440 356 aaKnown RBP1.99□□□□□ -2.09
SLIRP-202ENST00000553981 LELP1Q5T871 98 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 KRTAP26-1Q6PEX3 210 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 LCN15Q6UWW0 184 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 CROCCP3Q8IVE0 287 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 TMEM75Q8N9X5 138 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 OR10G4Q8NGN3 311 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 RASL10AQ92737 203 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 GPR82Q96P67 336 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 ODF3Q96PU9 254 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 SDHCQ99643 169 aaPredicted RBP1.99□□□□□ -2.09
SLIRP-202ENST00000553981 CHAC1Q9BUX1 264 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 SLC25A2Q9BXI2 301 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 SAMD10Q9BYL1 202 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 PSENENQ9NZ42 101 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 ZNF492Q9P255 531 aa1.99□□□□□ -2.09
SLIRP-202ENST00000553981 SRRM2Q9UQ35 2752 aaKnown RBP1.98□□□□□ -2.09
SLIRP-202ENST00000553981 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 IGHV3-73A0A0B4J1V6 119 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 MUC21A0A0G2JKD1 596 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 SMIM31A0A1B0GVY4 71 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 IGSF23A1L1A6 192 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 C7orf66A4D0T2 115 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 FAM24AA6NFZ4 105 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 ERICH4A6NGS2 130 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 A8MU10 97 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 CCSO14618 274 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 SSSCA1O60232 199 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 MPDU1O75352 247 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 SCGB2A1O75556 95 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 CFDP00746 253 aaPredicted RBP1.98□□□□□ -2.09
SLIRP-202ENST00000553981 TYMSP04818 313 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 SLC25A6P12236 298 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 CXCL2P19875 107 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 ANXA7P20073 488 aaKnown RBP1.98□□□□□ -2.09
SLIRP-202ENST00000553981 TBPP20226 339 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 SRIP30626 198 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 LEPP41159 167 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 ZNF80P51504 273 aaPredicted RBP1.98□□□□□ -2.09
SLIRP-202ENST00000553981 ATP5IP56385 69 aaPredicted RBP1.98□□□□□ -2.09
SLIRP-202ENST00000553981 RIGQ13278 110 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 ZNF846Q147U1 533 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 TMEM183BQ1AE95 376 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 SAMD13Q5VXD3 122 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 Q75L30 129 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 MIR17HGQ75NE6 70 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 TMEM183AQ8IXX5 376 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 SLC25A29Q8N8R3 303 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 DYNC2LI1Q8TCX1 351 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 PHYHIPLQ96FC7 376 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 SMIM8Q96KF7 97 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 SLC50A1Q9BRV3 221 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 SLIRPQ9GZT3 109 aaKnown RBP1.98□□□□□ -2.09
SLIRP-202ENST00000553981 JPT2Q9H910 190 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 NPVFQ9HCQ7 196 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 DNAJC4Q9NNZ3 241 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 PTTG2Q9NZH5 202 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 CCDC59Q9P031 241 aaKnown RBP1.98□□□□□ -2.09
SLIRP-202ENST00000553981 STRAPQ9Y3F4 350 aaKnown RBP1.98□□□□□ -2.09
SLIRP-202ENST00000553981 V9GYH0 126 aa1.98□□□□□ -2.09
SLIRP-202ENST00000553981 A0A087WXM4 84 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 TRAV4A0A0B4J268 109 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 TRGV4A0A0C4DH28 118 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 DUXBA0A1W2PPF3 345 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms