RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 F2Z2F3 143 aa6.26□□□□□ -1.41
RAB5B-210ENST00000553116 CUBNO60494 3623 aa6.26□□□□□ -1.41
RAB5B-210ENST00000553116 RNASE1P07998 156 aaKnown RBP6.26□□□□□ -1.41
RAB5B-210ENST00000553116 SNRPD3P62318 126 aaKnown RBP6.26□□□□□ -1.41
RAB5B-210ENST00000553116 SLAQ13239 276 aa6.26□□□□□ -1.41
RAB5B-210ENST00000553116 TCTEX1D4Q5JR98 221 aa6.26□□□□□ -1.41
RAB5B-210ENST00000553116 MUC21Q5SSG8 566 aa6.26□□□□□ -1.41
RAB5B-210ENST00000553116 Q6AWC8 147 aa6.26□□□□□ -1.41
RAB5B-210ENST00000553116 Q6ZN92 141 aa6.26□□□□□ -1.41
RAB5B-210ENST00000553116 C9orf47Q6ZRZ4 202 aa6.26□□□□□ -1.41
RAB5B-210ENST00000553116 VAMP8Q9BV40 100 aa6.26□□□□□ -1.41
RAB5B-210ENST00000553116 MS4A6AQ9H2W1 248 aa6.26□□□□□ -1.41
RAB5B-210ENST00000553116 LGALS9O00182 355 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 SOCS3O14543 225 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 ARMS2P0C7Q2 107 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 RPS20P60866 119 aaKnown RBP6.25□□□□□ -1.41
RAB5B-210ENST00000553116 PSMG4Q5JS54 123 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 COL5A1-AS1Q5SY13 56 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 SAMD13Q5VXD3 122 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 DYNLRB2Q8TF09 96 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 WIPF2Q8TF74 440 aaPredicted RBP6.25□□□□□ -1.41
RAB5B-210ENST00000553116 PEMTQ9UBM1 199 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 OTOGQ6ZRI0 2925 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 PAFAH1B2P68402 229 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 OR8A1Q8NGG7 326 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 LINC00477Q96M19 166 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 NAA38Q9BRA0 125 aaKnown RBP6.25□□□□□ -1.41
RAB5B-210ENST00000553116 RNF114Q9Y508 228 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 SAP30O75446 220 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 LYZL1Q6UWQ5 148 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 JMJD8Q96S16 334 aa6.25□□□□□ -1.41
RAB5B-210ENST00000553116 GPX1P07203 203 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 HILS1P60008 231 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 GDF5OSQ5U4N7 250 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 FER1L6-AS1Q8NA97 138 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 SAMD10Q9BYL1 202 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 TMEM160Q9NX00 188 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 A0A1B0GXF2 115 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 CD28P10747 220 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 TCTAP57738 103 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 KLF5Q13887 457 aaPredicted RBP6.24□□□□□ -1.41
RAB5B-210ENST00000553116 COX8CQ7Z4L0 72 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 LINC01006Q8NI28 216 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 DCANP1Q8TF63 244 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 INAFM1C9JVW0 142 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 IGKV3-20P01619 116 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 PMCHP20382 165 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 OR9G4Q8NGQ1 327 aa6.24□□□□□ -1.41
RAB5B-210ENST00000553116 TIMM8BQ9Y5J9 83 aaPredicted RBP6.24□□□□□ -1.41
RAB5B-210ENST00000553116 SETXQ7Z333 2677 aaKnown RBP6.23□□□□□ -1.41
RAB5B-210ENST00000553116 SERF1AO75920 110 aa6.23□□□□□ -1.41
RAB5B-210ENST00000553116 CDKN1BP46527 198 aa6.23□□□□□ -1.41
RAB5B-210ENST00000553116 HNRNPA3P51991 378 aaKnown RBP6.23□□□□□ -1.41
RAB5B-210ENST00000553116 FOXA3P55318 350 aaPredicted RBP6.23□□□□□ -1.41
RAB5B-210ENST00000553116 GAGE1Q13065 139 aa6.23□□□□□ -1.41
RAB5B-210ENST00000553116 TWIST1Q15672 202 aa6.23□□□□□ -1.41
RAB5B-210ENST00000553116 COA6Q5JTJ3 125 aaKnown RBP6.23□□□□□ -1.41
RAB5B-210ENST00000553116 DLX4Q92988 240 aaPredicted RBP6.23□□□□□ -1.41
RAB5B-210ENST00000553116 AGRNO00468 2067 aa6.23□□□□□ -1.41
RAB5B-210ENST00000553116 A4D1N5 150 aa6.23□□□□□ -1.41
RAB5B-210ENST00000553116 RNASE4P34096 147 aaKnown RBP6.23□□□□□ -1.41
RAB5B-210ENST00000553116 EBLN2Q6P2I7 272 aa6.23□□□□□ -1.41
RAB5B-210ENST00000553116 Q6ZWC4 215 aa6.23□□□□□ -1.41
RAB5B-210ENST00000553116 SMIM15Q7Z3B0 74 aa6.23□□□□□ -1.41
RAB5B-210ENST00000553116 CITED2Q99967 270 aaPredicted RBP6.23□□□□□ -1.41
RAB5B-210ENST00000553116 LENEPQ9Y5L5 61 aa6.23□□□□□ -1.41
RAB5B-210ENST00000553116 MIEN1Q9BRT3 115 aa6.22□□□□□ -1.41
RAB5B-210ENST00000553116 NTF3P20783 257 aa6.22□□□□□ -1.41
RAB5B-210ENST00000553116 TSSC4Q9Y5U2 329 aaPredicted RBP6.22□□□□□ -1.41
RAB5B-210ENST00000553116 ANK3Q12955 4377 aaKnown RBP6.22□□□□□ -1.41
RAB5B-210ENST00000553116 NSD1Q96L73 2696 aaPredicted RBP6.22□□□□□ -1.41
RAB5B-210ENST00000553116 TRAV21A0A0B4J279 112 aa6.22□□□□□ -1.41
RAB5B-210ENST00000553116 A0A1B0GW15 77 aa6.22□□□□□ -1.41
RAB5B-210ENST00000553116 K7EQG2 157 aa6.22□□□□□ -1.41
RAB5B-210ENST00000553116 S100A4P26447 101 aaKnown RBP6.22□□□□□ -1.41
RAB5B-210ENST00000553116 SPATA45Q537H7 98 aa6.22□□□□□ -1.41
RAB5B-210ENST00000553116 OR10J3Q5JRS4 329 aa6.22□□□□□ -1.41
RAB5B-210ENST00000553116 PRR9Q5T870 116 aa6.22□□□□□ -1.41
RAB5B-210ENST00000553116 KIR2DL5BA0A0G2JN68 375 aa6.21□□□□□ -1.41
RAB5B-210ENST00000553116 KIR2DL5BA0A0G2JPC4 375 aa6.21□□□□□ -1.41
RAB5B-210ENST00000553116 CCL24O00175 119 aa6.21□□□□□ -1.41
RAB5B-210ENST00000553116 Q0VG73 95 aa6.21□□□□□ -1.41
RAB5B-210ENST00000553116 NSUN5P1Q3KNT7 163 aa6.21□□□□□ -1.41
RAB5B-210ENST00000553116 RNASEKQ6P5S7 137 aaKnown RBP6.21□□□□□ -1.41
RAB5B-210ENST00000553116 Q6ZQT7 251 aa6.21□□□□□ -1.41
RAB5B-210ENST00000553116 KIR2DL5AQ8N109 375 aa6.21□□□□□ -1.41
RAB5B-210ENST00000553116 RAX2Q96IS3 184 aa6.21□□□□□ -1.41
RAB5B-210ENST00000553116 C18orf32Q8TCD1 76 aa6.21□□□□□ -1.42
RAB5B-210ENST00000553116 HIVEP1P15822 2718 aa6.21□□□□□ -1.42
RAB5B-210ENST00000553116 IGKV3D-20A0A0C4DH25 116 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 H0Y8G0 127 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 AMTP48728 403 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 FAM19A2Q8N3H0 131 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 ZFAND2AQ8N6M9 145 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 RCHY1Q96PM5 261 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 C16orf95Q9H693 158 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 C11orf21Q9P2W6 132 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 H3BVH4 76 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 HSBP1O75506 76 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 CTRLP40313 264 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms