RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 COL4A5P29400 1685 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 LTN1O94822 1766 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 LOC107986453A0A1B0GWG9 222 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 HYPMO75409 117 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 SAA1P0DJI8 122 aaPredicted RBP2.7□□□□□ -1.98
USP44-208ENST00000552440 COX6A1P12074 109 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 MIC13Q5XKP0 118 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 Q6P435 159 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 Q6ZR03 302 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 CYB561D1Q8N8Q1 229 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 TMEM105Q8N8V8 129 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 MAPK1IP1LQ8NDC0 245 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 CLEC2BQ92478 149 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 RAB37Q96AX2 223 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 AQP10Q96PS8 301 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 CITO14578 2027 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 BCORQ6W2J9 1755 aa2.69□□□□□ -1.98
USP44-208ENST00000552440 ZNF646O15015 1829 aaPredicted RBP2.69□□□□□ -1.98
USP44-208ENST00000552440 LAMB4A4D0S4 1761 aa2.69□□□□□ -1.98
USP44-208ENST00000552440 H3BQ85 93 aa2.69□□□□□ -1.98
USP44-208ENST00000552440 LINC00032P0C843 101 aa2.69□□□□□ -1.98
USP44-208ENST00000552440 ZNF117Q03924 483 aa2.69□□□□□ -1.98
USP44-208ENST00000552440 FUT5Q11128 374 aa2.69□□□□□ -1.98
USP44-208ENST00000552440 Q6ZS92 163 aa2.69□□□□□ -1.98
USP44-208ENST00000552440 VAMP8Q9BV40 100 aa2.69□□□□□ -1.98
USP44-208ENST00000552440 GFRA4Q9GZZ7 299 aa2.69□□□□□ -1.98
USP44-208ENST00000552440 TNFRSF19Q9NS68 423 aa2.69□□□□□ -1.98
USP44-208ENST00000552440 ANAPC1Q9H1A4 1944 aa2.69□□□□□ -1.98
USP44-208ENST00000552440 ALPK3Q96L96 1907 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 ZNF736B4DX44 427 aaPredicted RBP2.68□□□□□ -1.98
USP44-208ENST00000552440 H3BPC8 53 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 IGLC1P0CG04 106 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 DNAH10OSP0CZ25 163 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 PEBP1P30086 187 aaKnown RBP2.68□□□□□ -1.98
USP44-208ENST00000552440 OR2T2Q6IF00 324 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 OR5AK2Q8NH90 309 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 RETNLBQ9BQ08 111 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 NABP2Q9BQ15 211 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 LINC00467Q9BRT7 94 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 ASF1BQ9NVP2 202 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 NHP2Q9NX24 153 aaKnown RBP2.68□□□□□ -1.98
USP44-208ENST00000552440 TPRKBQ9Y3C4 175 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 AP4S1Q9Y587 144 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 POLEQ07864 2286 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 CDH23Q9H251 3354 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 ZFHX4Q86UP3 3567 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 BDP1A6H8Y1 2624 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 MON2Q7Z3U7 1717 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 KIF26AQ9ULI4 1882 aaPredicted RBP2.68□□□□□ -1.98
USP44-208ENST00000552440 MYH13Q9UKX3 1938 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 MUC6Q6W4X9 2439 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 IGKV3D-15A0A087WSY6 115 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 MUC21A0A0G2JKD1 596 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 A0A1B0GVY2 172 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 TMEM235A6NFC5 223 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 IGHV3-53P01767 116 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 IGLV7-43P04211 117 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 SHBGP04278 402 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 CKS2P33552 79 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 FXYD2P54710 66 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 ASB16-AS1Q495Z4 193 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 C6orf52Q5T4I8 152 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 TIMM9Q9Y5J7 89 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 RIC1Q4ADV7 1423 aa2.68□□□□□ -1.98
USP44-208ENST00000552440 PLXNB1O43157 2135 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 ARFGEF2Q9Y6D5 1785 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 TRAV7A0A075B6U4 112 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 A6NN06 94 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 LYRM1O43325 122 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 EDF1O60869 148 aaKnown RBP2.67□□□□□ -1.98
USP44-208ENST00000552440 GYPBP06028 91 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 ATP11AUNQ6ZP68 121 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 HYLS1Q96M11 299 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 TMEM106BQ9NUM4 274 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 FAM215AQ9Y5M1 114 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 LINC00312Q9Y6C7 94 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 CHD8Q9HCK8 2581 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 ZNF407Q9C0G0 2248 aa2.67□□□□□ -1.98
USP44-208ENST00000552440 KDM3BQ7LBC6 1761 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 USP34Q70CQ2 3546 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 TRBV10-2A0A0K0K1G8 114 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 SMIM31A0A1B0GVY4 71 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 PANO1I0J062 215 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 CPSF4O95639 269 aaKnown RBP2.66□□□□□ -1.98
USP44-208ENST00000552440 DEFA4P12838 97 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 IL7P13232 177 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 ZNF22P17026 224 aaPredicted RBP2.66□□□□□ -1.98
USP44-208ENST00000552440 NPC2P61916 151 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 GTF3C1Q12789 2109 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 LYZL1Q6UWQ5 148 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 FP248Q71RG6 208 aaPredicted RBP2.66□□□□□ -1.98
USP44-208ENST00000552440 POP5Q969H6 163 aaKnown RBP2.66□□□□□ -1.98
USP44-208ENST00000552440 ATG5Q9H1Y0 275 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 MED9Q9NWA0 146 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 SCN8AQ9UQD0 1980 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 MYO5AQ9Y4I1 1855 aaKnown RBP2.66□□□□□ -1.98
USP44-208ENST00000552440 RGPD2P0DJD1 1756 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 NCOR1O75376 2440 aa2.66□□□□□ -1.98
USP44-208ENST00000552440 CFAP54Q96N23 3096 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms