RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 KRTAP1-5Q9BYS1 174 aa6.76□□□□□ -1.33
HDAC7-229ENST00000549883 TRGV11A0A075B6L2 103 aa6.75□□□□□ -1.33
HDAC7-229ENST00000549883 BCL2L11O43521 198 aa6.75□□□□□ -1.33
HDAC7-229ENST00000549883 CRYBA4P53673 196 aa6.75□□□□□ -1.33
HDAC7-229ENST00000549883 CCL18P55774 89 aa6.75□□□□□ -1.33
HDAC7-229ENST00000549883 RASL10AQ92737 203 aa6.75□□□□□ -1.33
HDAC7-229ENST00000549883 ZNF471Q9BX82 626 aaPredicted RBP6.75□□□□□ -1.33
HDAC7-229ENST00000549883 ARL2-SNX15V9GYD0 113 aa6.75□□□□□ -1.33
HDAC7-229ENST00000549883 NBDYA0A0U1RRE5 68 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 SERTM2A0A1B0GWG4 89 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 PRSS29PA6NIE9 313 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 H3BNG1 76 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 PEX7O00628 323 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 PAX4O43316 350 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 IFNA7P01567 189 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 CRIP1P50238 77 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 DPPA3Q6W0C5 159 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 TMUB2Q71RG4 321 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 Q86TA4 180 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 FAM213BQ8TBF2 198 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 SPXQ9BT56 116 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 NDFIP1Q9BT67 221 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 FAT2Q9NYQ8 4349 aa6.74□□□□□ -1.33
HDAC7-229ENST00000549883 DNAH2Q9P225 4427 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 IGKV3D-20A0A0C4DH25 116 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 A0A0D9SG52 128 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 LOC100131303A0A0U1RQF7 123 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 C9JCJ5 164 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 K7EQM0 130 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 M0R2P5 195 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 PAGE4O60829 102 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 SEC11BP0C7V7 166 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 FAM3BP58499 235 aaPredicted RBP6.73□□□□□ -1.33
HDAC7-229ENST00000549883 LGALSLQ3ZCW2 172 aaPredicted RBP6.73□□□□□ -1.33
HDAC7-229ENST00000549883 SMUG1Q53HV7 270 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 C1orf134Q5TEV5 83 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 CST9LP1Q5W188 147 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 Q6ZNX1 250 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 SFT2D1Q8WV19 159 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 Q9H8V8 135 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 SDF2L1Q9HCN8 221 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 PRO0255Q9UI72 69 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 HHLA3Q9XRX5 114 aa6.73□□□□□ -1.33
HDAC7-229ENST00000549883 TRGV4A0A0C4DH28 118 aa6.72□□□□□ -1.33
HDAC7-229ENST00000549883 KANTRA0A1W2PQU2 76 aa6.72□□□□□ -1.33
HDAC7-229ENST00000549883 PGPEP1LA6NFU8 196 aa6.72□□□□□ -1.33
HDAC7-229ENST00000549883 PFN1P07737 140 aaKnown RBP6.72□□□□□ -1.33
HDAC7-229ENST00000549883 RNASE3P12724 160 aaKnown RBP6.72□□□□□ -1.33
HDAC7-229ENST00000549883 CCL20P78556 96 aa6.72□□□□□ -1.33
HDAC7-229ENST00000549883 LINC00336Q6ZUF6 198 aa6.72□□□□□ -1.33
HDAC7-229ENST00000549883 ZNF575Q86XF7 245 aa6.72□□□□□ -1.33
HDAC7-229ENST00000549883 MBD3L1Q8WWY6 194 aa6.72□□□□□ -1.33
HDAC7-229ENST00000549883 ZC2HC1AQ96GY0 325 aa6.72□□□□□ -1.33
HDAC7-229ENST00000549883 KCNS1Q96KK3 526 aa6.72□□□□□ -1.33
HDAC7-229ENST00000549883 C9orf85Q96MD7 179 aa6.72□□□□□ -1.33
HDAC7-229ENST00000549883 MRPS16Q9Y3D3 137 aaKnown RBP6.72□□□□□ -1.33
HDAC7-229ENST00000549883 hCG_2014768A0A024R1R8 64 aa6.71□□□□□ -1.34
HDAC7-229ENST00000549883 IGHV3-73A0A0B4J1V6 119 aa6.71□□□□□ -1.34
HDAC7-229ENST00000549883 TRAV4A0A0B4J268 109 aa6.71□□□□□ -1.34
HDAC7-229ENST00000549883 K7EQD1 137 aa6.71□□□□□ -1.34
HDAC7-229ENST00000549883 PFDN1O60925 122 aa6.71□□□□□ -1.34
HDAC7-229ENST00000549883 TNP2Q05952 138 aa6.71□□□□□ -1.34
HDAC7-229ENST00000549883 SAPCD1Q5SSQ6 148 aa6.71□□□□□ -1.34
HDAC7-229ENST00000549883 NHLRC2Q8NBF2 726 aa6.71□□□□□ -1.34
HDAC7-229ENST00000549883 OR4C5Q8NGB2 326 aa6.71□□□□□ -1.34
HDAC7-229ENST00000549883 UPK3BQ9BT76 320 aa6.71□□□□□ -1.34
HDAC7-229ENST00000549883 ICOSQ9Y6W8 199 aa6.71□□□□□ -1.34
HDAC7-229ENST00000549883 SCO2A0A1W2PP80 73 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 UMAD1C9J7I0 102 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 M0R036 132 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 SH2D1AO60880 128 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 GYPEP15421 78 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 ZNF876PQ49A33 203 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 ZFP69Q49AA0 526 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 ZNF506Q5JVG8 444 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 CFAP126Q5VTH2 177 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 LYPD5Q6UWN5 251 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 Q6ZSN1 163 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 TCTE3Q8IZS6 198 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 STOML3Q8TAV4 291 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 HIST1H2BAQ96A08 127 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 JPT2Q9H910 190 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 DNAH17Q9UFH2 4485 aa6.7□□□□□ -1.34
HDAC7-229ENST00000549883 GRIFINA4D1Z8 144 aa6.69□□□□□ -1.34
HDAC7-229ENST00000549883 FBLL1A6NHQ2 334 aaKnown RBP6.69□□□□□ -1.34
HDAC7-229ENST00000549883 FABP5P3A8MUU1 101 aa6.69□□□□□ -1.34
HDAC7-229ENST00000549883 RS1O15537 224 aa6.69□□□□□ -1.34
HDAC7-229ENST00000549883 NXPH4O95158 308 aa6.69□□□□□ -1.34
HDAC7-229ENST00000549883 LTAP01374 205 aa6.69□□□□□ -1.34
HDAC7-229ENST00000549883 H2AFB1P0C5Y9 115 aa6.69□□□□□ -1.34
HDAC7-229ENST00000549883 TPT1P13693 172 aaKnown RBP6.69□□□□□ -1.34
HDAC7-229ENST00000549883 GATA1P15976 413 aaPredicted RBP6.69□□□□□ -1.34
HDAC7-229ENST00000549883 PPT1P50897 306 aa6.69□□□□□ -1.34
HDAC7-229ENST00000549883 C6orf223Q8N319 242 aa6.69□□□□□ -1.34
HDAC7-229ENST00000549883 NKX6-2Q9C056 277 aaPredicted RBP6.69□□□□□ -1.34
HDAC7-229ENST00000549883 Q9UF83 564 aa6.69□□□□□ -1.34
HDAC7-229ENST00000549883 TNFRSF18Q9Y5U5 241 aa6.69□□□□□ -1.34
HDAC7-229ENST00000549883 TMSB15BA0A087X1C1 80 aa6.68□□□□□ -1.34
HDAC7-229ENST00000549883 A0A1B0GVG6 124 aa6.68□□□□□ -1.34
HDAC7-229ENST00000549883 KRBOX1C9JBD0 128 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms