RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 NACAE9PAV3 2078 aa6.43□□□□□ -1.38
YBX3-218ENST00000546298 TRAV8-1A0A0A6YYK1 113 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 IGHV3-16A0A0C4DH30 117 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 C9JCJ5 164 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 TAAR5O14804 337 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 EREGO14944 169 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 GNRH2O43555 120 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 CXorf1O96002 111 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 TCRAP04437 139 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 GIPP09681 153 aaPredicted RBP6.42□□□□□ -1.38
YBX3-218ENST00000546298 SFTA3P0C7M3 94 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 GYPEP15421 78 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 ATP6V0CP27449 155 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 GCHFRP30047 84 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 LINC00315P59091 139 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 SPATA12Q7Z6I5 190 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 NFE4Q86UQ8 179 aa6.42□□□□□ -1.38
YBX3-218ENST00000546298 F6UZH7 168 aa6.41□□□□□ -1.38
YBX3-218ENST00000546298 K7EQD1 137 aa6.41□□□□□ -1.38
YBX3-218ENST00000546298 CIDEAO60543 219 aa6.41□□□□□ -1.38
YBX3-218ENST00000546298 SUMO1P63165 101 aaKnown RBP6.41□□□□□ -1.38
YBX3-218ENST00000546298 GNG5P63218 68 aa6.41□□□□□ -1.38
YBX3-218ENST00000546298 ZFP69Q49AA0 526 aa6.41□□□□□ -1.38
YBX3-218ENST00000546298 SAPCD1Q5SSQ6 148 aa6.41□□□□□ -1.38
YBX3-218ENST00000546298 SUN5Q8TC36 379 aa6.41□□□□□ -1.38
YBX3-218ENST00000546298 TVP23CQ96ET8 276 aa6.41□□□□□ -1.38
YBX3-218ENST00000546298 PSG8Q9UQ74 426 aa6.41□□□□□ -1.38
YBX3-218ENST00000546298 LY96Q9Y6Y9 160 aa6.41□□□□□ -1.38
YBX3-218ENST00000546298 VPS13DQ5THJ4 4388 aa6.41□□□□□ -1.38
YBX3-218ENST00000546298 TYMSP04818 313 aa6.4□□□□□ -1.38
YBX3-218ENST00000546298 EVI2AP22794 236 aa6.4□□□□□ -1.38
YBX3-218ENST00000546298 FLI1Q01543 452 aaPredicted RBP6.4□□□□□ -1.38
YBX3-218ENST00000546298 SMUG1Q53HV7 270 aa6.4□□□□□ -1.38
YBX3-218ENST00000546298 CYB561D1Q8N8Q1 229 aa6.4□□□□□ -1.38
YBX3-218ENST00000546298 SGK494Q96LW2 274 aa6.4□□□□□ -1.38
YBX3-218ENST00000546298 PGPEP1Q9NXJ5 209 aa6.4□□□□□ -1.38
YBX3-218ENST00000546298 EPDR1Q9UM22 224 aa6.4□□□□□ -1.38
YBX3-218ENST00000546298 MUC4Q99102 2169 aa6.4□□□□□ -1.39
YBX3-218ENST00000546298 FXYD6-FXYD2A0A087WZ82 144 aa6.39□□□□□ -1.39
YBX3-218ENST00000546298 A0A1W2PRE2 83 aa6.39□□□□□ -1.39
YBX3-218ENST00000546298 GCGP01275 180 aa6.39□□□□□ -1.39
YBX3-218ENST00000546298 PFN1P07737 140 aaKnown RBP6.39□□□□□ -1.39
YBX3-218ENST00000546298 PPT1P50897 306 aa6.39□□□□□ -1.39
YBX3-218ENST00000546298 TIRAPP58753 221 aa6.39□□□□□ -1.39
YBX3-218ENST00000546298 ERVFC1-1P60608 527 aa6.39□□□□□ -1.39
YBX3-218ENST00000546298 Q5BKY6 102 aa6.39□□□□□ -1.39
YBX3-218ENST00000546298 C10orf126Q8N4M7 172 aa6.39□□□□□ -1.39
YBX3-218ENST00000546298 TMEM75Q8N9X5 138 aa6.39□□□□□ -1.39
YBX3-218ENST00000546298 NHLRC2Q8NBF2 726 aa6.39□□□□□ -1.39
YBX3-218ENST00000546298 OR2T35Q8NGX2 323 aa6.39□□□□□ -1.39
YBX3-218ENST00000546298 PRADC1Q9BSG0 188 aa6.39□□□□□ -1.39
YBX3-218ENST00000546298 NKX6-2Q9C056 277 aaPredicted RBP6.39□□□□□ -1.39
YBX3-218ENST00000546298 HERC2O95714 4834 aa6.39□□□□□ -1.39
YBX3-218ENST00000546298 DNAH10Q8IVF4 4471 aa6.38□□□□□ -1.39
YBX3-218ENST00000546298 CTXND1A0A1B0GTU2 59 aa6.38□□□□□ -1.39
YBX3-218ENST00000546298 RS1O15537 224 aa6.38□□□□□ -1.39
YBX3-218ENST00000546298 IFNA7P01567 189 aa6.38□□□□□ -1.39
YBX3-218ENST00000546298 GATA1P15976 413 aaPredicted RBP6.38□□□□□ -1.39
YBX3-218ENST00000546298 ZNF876PQ49A33 203 aa6.38□□□□□ -1.39
YBX3-218ENST00000546298 AKR1C8PQ5T2L2 129 aa6.38□□□□□ -1.39
YBX3-218ENST00000546298 RPL7L1Q6DKI1 246 aaKnown RBP6.38□□□□□ -1.39
YBX3-218ENST00000546298 Q6ZRN7 208 aaPredicted RBP6.38□□□□□ -1.39
YBX3-218ENST00000546298 PRNTQ86SH4 94 aa6.38□□□□□ -1.39
YBX3-218ENST00000546298 PTH2Q96A98 100 aa6.38□□□□□ -1.39
YBX3-218ENST00000546298 SH3BGRL3Q9H299 93 aa6.38□□□□□ -1.39
YBX3-218ENST00000546298 MSRB1Q9NZV6 116 aa6.38□□□□□ -1.39
YBX3-218ENST00000546298 DNAH6Q9C0G6 4158 aa6.37□□□□□ -1.39
YBX3-218ENST00000546298 TRAV8-6A0A0B4J262 113 aa6.37□□□□□ -1.39
YBX3-218ENST00000546298 TRBV6-4A0A1B0GX49 114 aa6.37□□□□□ -1.39
YBX3-218ENST00000546298 RNF222A6NCQ9 220 aa6.37□□□□□ -1.39
YBX3-218ENST00000546298 GGTLC3B5MD39 225 aa6.37□□□□□ -1.39
YBX3-218ENST00000546298 IGLV2-11P01706 119 aa6.37□□□□□ -1.39
YBX3-218ENST00000546298 DNAH10OSP0CZ25 163 aa6.37□□□□□ -1.39
YBX3-218ENST00000546298 S100A4P26447 101 aaKnown RBP6.37□□□□□ -1.39
YBX3-218ENST00000546298 ZNF80P51504 273 aaPredicted RBP6.37□□□□□ -1.39
YBX3-218ENST00000546298 KRTAP10-2P60368 255 aa6.37□□□□□ -1.39
YBX3-218ENST00000546298 RHOHQ15669 191 aa6.37□□□□□ -1.39
YBX3-218ENST00000546298 CDPF1Q6NVV7 123 aa6.37□□□□□ -1.39
YBX3-218ENST00000546298 WFDC10BQ8IUB3 73 aa6.37□□□□□ -1.39
YBX3-218ENST00000546298 MAPKAPK5-AS1Q8N8E1 139 aa6.37□□□□□ -1.39
YBX3-218ENST00000546298 C9orf85Q96MD7 179 aa6.37□□□□□ -1.39
YBX3-218ENST00000546298 IGHV3-38A0A0C4DH36 116 aa6.36□□□□□ -1.39
YBX3-218ENST00000546298 FABP5P3A8MUU1 101 aa6.36□□□□□ -1.39
YBX3-218ENST00000546298 CRYGDP07320 174 aa6.36□□□□□ -1.39
YBX3-218ENST00000546298 MGST1P10620 155 aaKnown RBP6.36□□□□□ -1.39
YBX3-218ENST00000546298 RGS21Q2M5E4 152 aa6.36□□□□□ -1.39
YBX3-218ENST00000546298 CFAP126Q5VTH2 177 aa6.36□□□□□ -1.39
YBX3-218ENST00000546298 STOML3Q8TAV4 291 aa6.36□□□□□ -1.39
YBX3-218ENST00000546298 HIST1H2BAQ96A08 127 aa6.36□□□□□ -1.39
YBX3-218ENST00000546298 C11orf21Q9P2W6 132 aa6.36□□□□□ -1.39
YBX3-218ENST00000546298 KIAA1109Q2LD37 5005 aa6.35□□□□□ -1.39
YBX3-218ENST00000546298 LOC100131303A0A0U1RQF7 123 aa6.35□□□□□ -1.39
YBX3-218ENST00000546298 PGPEP1LA6NFU8 196 aa6.35□□□□□ -1.39
YBX3-218ENST00000546298 ASIPP42127 132 aa6.35□□□□□ -1.39
YBX3-218ENST00000546298 ZNF506Q5JVG8 444 aa6.35□□□□□ -1.39
YBX3-218ENST00000546298 PIK3CD-AS1Q5SR53 167 aa6.35□□□□□ -1.39
YBX3-218ENST00000546298 Q8N1X5 172 aa6.35□□□□□ -1.39
YBX3-218ENST00000546298 SLC25A29Q8N8R3 303 aa6.35□□□□□ -1.39
YBX3-218ENST00000546298 ZFP30Q9Y2G7 519 aa6.35□□□□□ -1.39
YBX3-218ENST00000546298 TNFRSF18Q9Y5U5 241 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms