RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 SDF2L1Q9HCN8 221 aa12.18□□□□□ -0.46
RABGGTA-203ENST00000543002 DAD1P61803 113 aa12.17□□□□□ -0.46
RABGGTA-203ENST00000543002 ZNF415Q09FC8 603 aa12.17□□□□□ -0.46
RABGGTA-203ENST00000543002 TOR2AQ5JU69 321 aa12.17□□□□□ -0.46
RABGGTA-203ENST00000543002 CEMP1Q6PRD7 247 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-203ENST00000543002 NHLRC2Q8NBF2 726 aa12.17□□□□□ -0.46
RABGGTA-203ENST00000543002 TRAV10A0A0B4J240 114 aa12.16□□□□□ -0.46
RABGGTA-203ENST00000543002 NUPR2A6NF83 97 aa12.16□□□□□ -0.46
RABGGTA-203ENST00000543002 TMEM250H0YL14 139 aa12.16□□□□□ -0.46
RABGGTA-203ENST00000543002 GNRH2O43555 120 aa12.16□□□□□ -0.46
RABGGTA-203ENST00000543002 NDUFS6O75380 124 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-203ENST00000543002 ZNF674Q2M3X9 581 aa12.16□□□□□ -0.46
RABGGTA-203ENST00000543002 FAM162BQ5T6X4 162 aa12.16□□□□□ -0.46
RABGGTA-203ENST00000543002 EIF5A2Q9GZV4 153 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-203ENST00000543002 MDFICQ9P1T7 246 aa12.16□□□□□ -0.46
RABGGTA-203ENST00000543002 RAB19A4D1S5 217 aa12.15□□□□□ -0.46
RABGGTA-203ENST00000543002 SH2D1AO60880 128 aa12.15□□□□□ -0.46
RABGGTA-203ENST00000543002 TYMSP04818 313 aa12.15□□□□□ -0.46
RABGGTA-203ENST00000543002 DEFB130BP0DP73 79 aa12.15□□□□□ -0.46
RABGGTA-203ENST00000543002 DEFB130AP0DP74 79 aa12.15□□□□□ -0.46
RABGGTA-203ENST00000543002 CENPWQ5EE01 88 aa12.15□□□□□ -0.46
RABGGTA-203ENST00000543002 LINC00612Q8N6U2 182 aa12.15□□□□□ -0.46
RABGGTA-203ENST00000543002 IGKV3D-20A0A0C4DH25 116 aa12.14□□□□□ -0.47
RABGGTA-203ENST00000543002 IGHV3-16A0A0C4DH30 117 aa12.14□□□□□ -0.47
RABGGTA-203ENST00000543002 GNG4P50150 75 aa12.14□□□□□ -0.47
RABGGTA-203ENST00000543002 SMIM12Q96EX1 92 aa12.14□□□□□ -0.47
RABGGTA-203ENST00000543002 DEFB131BA0A096LNP1 70 aa12.13□□□□□ -0.47
RABGGTA-203ENST00000543002 SPINK4O60575 86 aa12.13□□□□□ -0.47
RABGGTA-203ENST00000543002 IGLV2-8P01709 118 aa12.13□□□□□ -0.47
RABGGTA-203ENST00000543002 ORM1P02763 201 aa12.13□□□□□ -0.47
RABGGTA-203ENST00000543002 Q6ZTI0 123 aa12.13□□□□□ -0.47
RABGGTA-203ENST00000543002 SPXQ9BT56 116 aa12.13□□□□□ -0.47
RABGGTA-203ENST00000543002 KLK5Q9Y337 293 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-203ENST00000543002 TRBV20OR9-2A0A075B6H5 130 aa12.12□□□□□ -0.47
RABGGTA-203ENST00000543002 GAGE12BA1L429 117 aa12.12□□□□□ -0.47
RABGGTA-203ENST00000543002 GAGE7O76087 117 aa12.12□□□□□ -0.47
RABGGTA-203ENST00000543002 GAGE12FP0CL80 117 aa12.12□□□□□ -0.47
RABGGTA-203ENST00000543002 GAGE12GP0CL81 117 aa12.12□□□□□ -0.47
RABGGTA-203ENST00000543002 GAGE12IP0CL82 117 aa12.12□□□□□ -0.47
RABGGTA-203ENST00000543002 RAB14P61106 215 aa12.12□□□□□ -0.47
RABGGTA-203ENST00000543002 IFITM2Q01629 132 aa12.12□□□□□ -0.47
RABGGTA-203ENST00000543002 LGALS9BQ3B8N2 356 aa12.12□□□□□ -0.47
RABGGTA-203ENST00000543002 PARLQ9H300 379 aa12.12□□□□□ -0.47
RABGGTA-203ENST00000543002 TRGV1A0A0A0MS02 117 aa12.11□□□□□ -0.47
RABGGTA-203ENST00000543002 B4DEV8 164 aa12.11□□□□□ -0.47
RABGGTA-203ENST00000543002 KRBOX1C9JBD0 128 aa12.11□□□□□ -0.47
RABGGTA-203ENST00000543002 C9JCJ5 164 aa12.11□□□□□ -0.47
RABGGTA-203ENST00000543002 M0R036 132 aa12.11□□□□□ -0.47
RABGGTA-203ENST00000543002 ATP5G1P05496 136 aa12.11□□□□□ -0.47
RABGGTA-203ENST00000543002 SRP19P09132 144 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-203ENST00000543002 LINC01559Q495D7 138 aa12.11□□□□□ -0.47
RABGGTA-203ENST00000543002 PRR27Q6MZM9 219 aa12.11□□□□□ -0.47
RABGGTA-203ENST00000543002 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
RABGGTA-203ENST00000543002 MRPL16Q9NX20 251 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-203ENST00000543002 CSMD3Q7Z407 3707 aa12.1□□□□□ -0.47
RABGGTA-203ENST00000543002 PGPEP1LA6NFU8 196 aa12.1□□□□□ -0.47
RABGGTA-203ENST00000543002 MGST1P10620 155 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-203ENST00000543002 RNASE3P12724 160 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-203ENST00000543002 HTN3P15516 51 aa12.1□□□□□ -0.47
RABGGTA-203ENST00000543002 DNLZQ5SXM8 178 aa12.1□□□□□ -0.47
RABGGTA-203ENST00000543002 C9orf85Q96MD7 179 aa12.1□□□□□ -0.47
RABGGTA-203ENST00000543002 TRGV2A0A075B6R0 118 aa12.09□□□□□ -0.47
RABGGTA-203ENST00000543002 M0R2P5 195 aa12.09□□□□□ -0.47
RABGGTA-203ENST00000543002 ASIPP42127 132 aa12.09□□□□□ -0.47
RABGGTA-203ENST00000543002 CEBPGP53567 150 aa12.09□□□□□ -0.47
RABGGTA-203ENST00000543002 PEA15Q15121 130 aa12.09□□□□□ -0.47
RABGGTA-203ENST00000543002 CLLU1Q5K131 121 aa12.09□□□□□ -0.47
RABGGTA-203ENST00000543002 RASL10AQ92737 203 aa12.09□□□□□ -0.47
RABGGTA-203ENST00000543002 SMDT1Q9H4I9 107 aa12.09□□□□□ -0.47
RABGGTA-203ENST00000543002 BIN3Q9NQY0 253 aa12.09□□□□□ -0.47
RABGGTA-203ENST00000543002 TENM2Q9NT68 2774 aa12.08□□□□□ -0.48
RABGGTA-203ENST00000543002 IGLL5B9A064 214 aa12.08□□□□□ -0.48
RABGGTA-203ENST00000543002 S100A4P26447 101 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-203ENST00000543002 SRSF3P84103 164 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-203ENST00000543002 ZNF575Q86XF7 245 aa12.08□□□□□ -0.48
RABGGTA-203ENST00000543002 OCC1Q8TAD7 63 aa12.08□□□□□ -0.48
RABGGTA-203ENST00000543002 TMSB15BA0A087X1C1 80 aa12.07□□□□□ -0.48
RABGGTA-203ENST00000543002 GRIFINA4D1Z8 144 aa12.07□□□□□ -0.48
RABGGTA-203ENST00000543002 C19orf71A6NCJ1 209 aa12.07□□□□□ -0.48
RABGGTA-203ENST00000543002 C9JQL5 133 aa12.07□□□□□ -0.48
RABGGTA-203ENST00000543002 F5H768 121 aa12.07□□□□□ -0.48
RABGGTA-203ENST00000543002 OR5I1Q13606 314 aa12.07□□□□□ -0.48
RABGGTA-203ENST00000543002 DAZAP1Q96EP5 407 aaKnown RBP12.07□□□□□ -0.48
RABGGTA-203ENST00000543002 FAM210BQ96KR6 192 aa12.07□□□□□ -0.48
RABGGTA-203ENST00000543002 SMIM7Q9BQ49 75 aa12.07□□□□□ -0.48
RABGGTA-203ENST00000543002 IL36BQ9NZH7 164 aa12.07□□□□□ -0.48
RABGGTA-203ENST00000543002 STARD9Q9P2P6 4700 aa12.06□□□□□ -0.48
RABGGTA-203ENST00000543002 CXCL1P09341 107 aa12.06□□□□□ -0.48
RABGGTA-203ENST00000543002 TCTAP57738 103 aa12.06□□□□□ -0.48
RABGGTA-203ENST00000543002 RPL19P84098 196 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-203ENST00000543002 PTH2Q96A98 100 aa12.06□□□□□ -0.48
RABGGTA-203ENST00000543002 IGHV4-4A0A075B6R2 117 aa12.05□□□□□ -0.48
RABGGTA-203ENST00000543002 ZNF727A8MUV8 499 aa12.05□□□□□ -0.48
RABGGTA-203ENST00000543002 LY96Q9Y6Y9 160 aa12.05□□□□□ -0.48
RABGGTA-203ENST00000543002 H3BVH4 76 aa12.04□□□□□ -0.48
RABGGTA-203ENST00000543002 K7EN84 100 aa12.04□□□□□ -0.48
RABGGTA-203ENST00000543002 ARMS2P0C7Q2 107 aa12.04□□□□□ -0.48
RABGGTA-203ENST00000543002 ZNF876PQ49A33 203 aa12.04□□□□□ -0.48
RABGGTA-203ENST00000543002 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
RABGGTA-203ENST00000543002 APLNQ9ULZ1 77 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms