RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 PRM2P04554 102 aa4.22□□□□□ -1.73
ABCF1-207ENST00000542772 CXCL1P09341 107 aa4.22□□□□□ -1.73
ABCF1-207ENST00000542772 SFTA3P0C7M3 94 aa4.22□□□□□ -1.73
ABCF1-207ENST00000542772 FOXA3P55318 350 aaPredicted RBP4.22□□□□□ -1.73
ABCF1-207ENST00000542772 OR5I1Q13606 314 aa4.22□□□□□ -1.73
ABCF1-207ENST00000542772 RRN3P1Q2M238 152 aa4.22□□□□□ -1.73
ABCF1-207ENST00000542772 LINC01559Q495D7 138 aa4.22□□□□□ -1.73
ABCF1-207ENST00000542772 IBA57Q5T440 356 aaKnown RBP4.22□□□□□ -1.73
ABCF1-207ENST00000542772 FAM162BQ5T6X4 162 aa4.22□□□□□ -1.73
ABCF1-207ENST00000542772 FAM159AQ6UWV7 190 aa4.22□□□□□ -1.73
ABCF1-207ENST00000542772 Q8NAQ8 132 aa4.22□□□□□ -1.73
ABCF1-207ENST00000542772 RNASE8Q8TDE3 154 aaKnown RBP4.22□□□□□ -1.73
ABCF1-207ENST00000542772 PTH2Q96A98 100 aa4.22□□□□□ -1.73
ABCF1-207ENST00000542772 SSBP4Q9BWG4 385 aaPredicted RBP4.22□□□□□ -1.73
ABCF1-207ENST00000542772 OSTCQ9NRP0 149 aa4.22□□□□□ -1.73
ABCF1-207ENST00000542772 NAT8Q9UHE5 227 aa4.22□□□□□ -1.73
ABCF1-207ENST00000542772 IGHV3-16A0A0C4DH30 117 aa4.21□□□□□ -1.74
ABCF1-207ENST00000542772 TMEM189A5PLL7 270 aa4.21□□□□□ -1.74
ABCF1-207ENST00000542772 ZNF705GA8MUZ8 300 aaPredicted RBP4.21□□□□□ -1.74
ABCF1-207ENST00000542772 ADCYAP1P18509 176 aa4.21□□□□□ -1.74
ABCF1-207ENST00000542772 CEBPGP53567 150 aa4.21□□□□□ -1.74
ABCF1-207ENST00000542772 PNRC1Q12796 327 aaPredicted RBP4.21□□□□□ -1.74
ABCF1-207ENST00000542772 DAZ2Q13117 558 aaKnown RBP4.21□□□□□ -1.74
ABCF1-207ENST00000542772 NHLRC2Q8NBF2 726 aa4.21□□□□□ -1.74
ABCF1-207ENST00000542772 C11orf72Q8NBR9 251 aa4.21□□□□□ -1.74
ABCF1-207ENST00000542772 IL17DQ8TAD2 202 aa4.21□□□□□ -1.74
ABCF1-207ENST00000542772 TMEM263Q8WUH6 116 aaKnown RBP4.21□□□□□ -1.74
ABCF1-207ENST00000542772 ISOC2Q96AB3 205 aa4.21□□□□□ -1.74
ABCF1-207ENST00000542772 TMEM208Q9BTX3 173 aa4.21□□□□□ -1.74
ABCF1-207ENST00000542772 C11orf68Q9H3H3 251 aaKnown RBP4.21□□□□□ -1.74
ABCF1-207ENST00000542772 SCRT2Q9NQ03 307 aa4.21□□□□□ -1.74
ABCF1-207ENST00000542772 CARHSP1Q9Y2V2 147 aaKnown RBP4.21□□□□□ -1.74
ABCF1-207ENST00000542772 TRGV11A0A075B6L2 103 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 IGHV3OR16-12A0A075B7B8 117 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 IGHV4-28A0A0C4DH34 117 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 FAM231BA6NCW3 169 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 F8W036 122 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 ORM1P02763 201 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 TYMSP04818 313 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 MED14OSP0DP75 135 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 MGST1P10620 155 aaKnown RBP4.2□□□□□ -1.74
ABCF1-207ENST00000542772 RNASE3P12724 160 aaKnown RBP4.2□□□□□ -1.74
ABCF1-207ENST00000542772 TCL1AP56279 114 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 RPS20P60866 119 aaKnown RBP4.2□□□□□ -1.74
ABCF1-207ENST00000542772 LGALS9BQ3B8N2 356 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 CT83Q5H943 113 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 PIK3CD-AS1Q5SR53 167 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 MUC21Q5SSG8 566 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 WDR73Q6P4I2 378 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 LINC00612Q8N6U2 182 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 RASL10AQ92737 203 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 DAZAP1Q96EP5 407 aaKnown RBP4.2□□□□□ -1.74
ABCF1-207ENST00000542772 C16orf74Q96GX8 76 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 C9orf85Q96MD7 179 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 C18orf15Q96N68 181 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 SPXQ9BT56 116 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 EDA2RQ9HAV5 297 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 RETNQ9HD89 108 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 IL36BQ9NZH7 164 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 MDFICQ9P1T7 246 aa4.2□□□□□ -1.74
ABCF1-207ENST00000542772 MUC4Q99102 2169 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 IGHV4-4A0A075B6R2 117 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 CBY3A6NI87 242 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 LYRM9A8MSI8 78 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 B4DEV8 164 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 SNAI2O43623 268 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 GATCO43716 136 aaKnown RBP4.19□□□□□ -1.74
ABCF1-207ENST00000542772 SPINK4O60575 86 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 P01737 135 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 OR5AL1P0C617 328 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 ARMS2P0C7Q2 107 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 IGLC6P0CF74 106 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 HTN1P15515 57 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 ERVFC1-1P60608 527 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 PRR27Q6MZM9 219 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 OR10G8Q8NGN5 311 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 SFRP2Q96HF1 295 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 NDUFAF3Q9BU61 184 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 GFRA4Q9GZZ7 299 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 RNASE7Q9H1E1 156 aaKnown RBP4.19□□□□□ -1.74
ABCF1-207ENST00000542772 GSN-AS1Q9NRJ2 163 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 TMEM242Q9NWH2 141 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 DKK2Q9UBU2 259 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 TIMM8BQ9Y5J9 83 aaPredicted RBP4.19□□□□□ -1.74
ABCF1-207ENST00000542772 U3KQK5 164 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 V9GYV3 84 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 TENM3Q9P273 2699 aa4.19□□□□□ -1.74
ABCF1-207ENST00000542772 A0A0J9YWU9 116 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 A0A1W2PPQ1 181 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 SMIM27A0A1W2PRY6 76 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 XKRY2A2RUG3 117 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 GRIFINA4D1Z8 144 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 A8MWL6 223 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 SNURFLB1AK76 121 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 F2Z2F3 143 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 M0R036 132 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 M0R2P5 195 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 PPP1R2P9O14990 202 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 SPART-AS1P0CW21 52 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 RPL19P84098 196 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms