RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 NMBP08949 121 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 UBE2MP61081 183 aaKnown RBP0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 HSPE1P61604 102 aaKnown RBP0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 UBE2D2P62837 147 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 MRPS25P82663 173 aaKnown RBP0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 CYLC2Q14093 348 aaPredicted RBP0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 FLOT2Q14254 428 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 ZNF506Q5JVG8 444 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 ETFRF1Q6IPR1 90 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 PRSS54Q6PEW0 395 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 LYZL1Q6UWQ5 148 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 LYZL2Q7Z4W2 148 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 FUNDC1Q8IVP5 155 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 H1FOOQ8IZA3 346 aaPredicted RBP0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 MNS1Q8NEH6 495 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR10D4PQ8NGN7 298 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR2T35Q8NGX2 323 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 DEDD2Q8WXF8 326 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 MRPL53Q96EL3 112 aaKnown RBP0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 C2orf48Q96LS8 159 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 NSMCE2Q96MF7 247 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 IMMP2LQ96T52 175 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 ATP5SQ99766 215 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 CMSS1Q9BQ75 279 aaKnown RBP0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 HDHD3Q9BSH5 251 aaPredicted RBP0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 TMEM59Q9BXS4 323 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 LPAR5Q9H1C0 372 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 IMPAD1Q9NX62 359 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 TAS2R4Q9NYW5 299 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR5AC2Q9NZP5 309 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 COMMD9Q9P000 198 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 AK3Q9UIJ7 227 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 GNG8Q9UK08 70 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 IGLV4-69A0A075B6H9 119 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 C19orf71A6NCJ1 209 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 SPAG7O75391 227 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 KRASP01116 189 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 NPPAP01160 153 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR2T7P0C7T2 308 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 COX4I1P13073 169 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 RPL7P18124 248 aaKnown RBP0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 SULT1A2P50226 295 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 ETV1P50549 477 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 ARPC4P59998 168 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 CATR1Q13166 79 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 EIF4EBP1Q13541 118 aaPredicted RBP0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 KRTAP19-8Q3LI54 63 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 FAM159AQ6UWV7 190 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 LHFPL1Q86WI0 220 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 JAGN1Q8N5M9 183 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR2D3Q8NGH3 330 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 MRPL48Q96GC5 212 aaKnown RBP0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 ACY3Q96HD9 319 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 NIPSNAP1Q9BPW8 284 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 SRRQ9GZT4 340 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 RAB17Q9H0T7 212 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 JPT2Q9H910 190 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 NPVFQ9HCQ7 196 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 NDUFA13Q9P0J0 144 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 RBM12B-AS1Q9P1G2 102 aa0.91□□□□□ -2.26
TRAV1-1-201ENST00000542354 MUC19Q7Z5P9 8384 aa0.9□□□□□ -2.26
TRAV1-1-201ENST00000542354 IGKV1D-13A0A0B4J2D9 117 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 IGHV1-58A0A0C4DH39 117 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 CCDC182A6NF36 153 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 ZFP92A6NM28 416 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 INS-IGF2F8WCM5 200 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 CFDP00746 253 aaPredicted RBP0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 CDK1P06493 297 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 OR4E1P0C645 316 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 IGKV1-13P0DP09 117 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 HRES1P13985 223 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 ZNF19P17023 458 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 F2RP25116 425 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 PRSS3P35030 304 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 HTR2BP41595 481 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 UBE2AP49459 152 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 CAMPP49913 170 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 SNRPEP62304 92 aaKnown RBP0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 UBE2V1Q13404 147 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 LBHQ53QV2 105 aaPredicted RBP0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 AMMECR1LQ6DCA0 310 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 ZFP2Q6ZN57 461 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 ARRDC1Q8N5I2 433 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 NUP35Q8NFH5 326 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 TSPAN14Q8NG11 270 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 OR8J3Q8NGG0 315 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 SVIPQ8NHG7 77 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 RNASEH2CQ8TDP1 164 aaKnown RBP0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 PGLYRP4Q96LB8 373 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 URM1Q9BTM9 101 aaKnown RBP0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 C20orf27Q9GZN8 174 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 PPCSQ9HAB8 311 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 ENY2Q9NPA8 101 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 CCL28Q9NRJ3 127 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 FLVCR2Q9UPI3 526 aa0.9□□□□□ -2.27
TRAV1-1-201ENST00000542354 IGLV4-3A0A075B6K6 122 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 A0A087X0K7 114 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 ERICH4A6NGS2 130 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 EI24O14681 340 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms