RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 IGHV3-53P01767 116 aa12.56□□□□□ -0.4
VARS2-212ENST00000542001 WDFY3Q8IZQ1 3526 aa12.56□□□□□ -0.4
VARS2-212ENST00000542001 PAX1P15863 534 aa12.55□□□□□ -0.4
VARS2-212ENST00000542001 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
VARS2-212ENST00000542001 RAX2Q96IS3 184 aa12.55□□□□□ -0.4
VARS2-212ENST00000542001 MS4A6AQ9H2W1 248 aa12.55□□□□□ -0.4
VARS2-212ENST00000542001 IGLV11-55A0A075B6I3 123 aa12.55□□□□□ -0.4
VARS2-212ENST00000542001 C9orf139Q6ZV77 190 aa12.55□□□□□ -0.4
VARS2-212ENST00000542001 Q8N9W7 124 aa12.55□□□□□ -0.4
VARS2-212ENST00000542001 ZNF747Q9BV97 191 aa12.55□□□□□ -0.4
VARS2-212ENST00000542001 GEMIN7Q9H840 131 aaKnown RBP12.55□□□□□ -0.4
VARS2-212ENST00000542001 FAM231BA6NCW3 169 aa12.55□□□□□ -0.4
VARS2-212ENST00000542001 ZNF876PQ49A33 203 aa12.55□□□□□ -0.4
VARS2-212ENST00000542001 MRPL35Q9NZE8 188 aaKnown RBP12.55□□□□□ -0.4
VARS2-212ENST00000542001 K7ERJ3 54 aa12.54□□□□□ -0.4
VARS2-212ENST00000542001 OR11H6Q8NGC7 330 aa12.54□□□□□ -0.4
VARS2-212ENST00000542001 B4DSR2 109 aa12.54□□□□□ -0.4
VARS2-212ENST00000542001 MRPS16Q9Y3D3 137 aaKnown RBP12.54□□□□□ -0.4
VARS2-212ENST00000542001 MSMBP08118 114 aa12.54□□□□□ -0.4
VARS2-212ENST00000542001 GAGE12BA1L429 117 aa12.53□□□□□ -0.4
VARS2-212ENST00000542001 TRBV12-3P01733 135 aa12.53□□□□□ -0.4
VARS2-212ENST00000542001 SAMD5Q5TGI4 173 aa12.53□□□□□ -0.4
VARS2-212ENST00000542001 AKAP13Q12802 2813 aa12.53□□□□□ -0.4
VARS2-212ENST00000542001 OVOL1O14753 267 aa12.53□□□□□ -0.4
VARS2-212ENST00000542001 SUMO2P61956 95 aaKnown RBP12.53□□□□□ -0.4
VARS2-212ENST00000542001 HIST2H2BDQ6DRA6 164 aa12.53□□□□□ -0.4
VARS2-212ENST00000542001 CST9LQ9H4G1 147 aa12.53□□□□□ -0.4
VARS2-212ENST00000542001 TRAV2A0A0B4J234 112 aa12.53□□□□□ -0.4
VARS2-212ENST00000542001 NPIPB6E9PJ23 425 aa12.53□□□□□ -0.4
VARS2-212ENST00000542001 ZNF80P51504 273 aaPredicted RBP12.53□□□□□ -0.4
VARS2-212ENST00000542001 DEFB136Q30KP8 78 aa12.53□□□□□ -0.4
VARS2-212ENST00000542001 PHLDA1Q8WV24 401 aaPredicted RBP12.53□□□□□ -0.4
VARS2-212ENST00000542001 PRSS22Q9GZN4 317 aa12.53□□□□□ -0.4
VARS2-212ENST00000542001 DMXL2Q8TDJ6 3036 aa12.53□□□□□ -0.4
VARS2-212ENST00000542001 CENPVL3A0A0U1RRI6 287 aa12.52□□□□□ -0.4
VARS2-212ENST00000542001 TMEM238LA0A1B0GVL6 79 aa12.52□□□□□ -0.4
VARS2-212ENST00000542001 A6NJY4 79 aa12.52□□□□□ -0.4
VARS2-212ENST00000542001 HSD52Q0P140 79 aa12.52□□□□□ -0.4
VARS2-212ENST00000542001 SRSF8Q9BRL6 282 aaKnown RBP12.52□□□□□ -0.4
VARS2-212ENST00000542001 IGHV4-59P01825 116 aa12.52□□□□□ -0.4
VARS2-212ENST00000542001 IGHV4-30-2A0A087WSY4 118 aa12.52□□□□□ -0.41
VARS2-212ENST00000542001 IGHV3-16A0A0C4DH30 117 aa12.52□□□□□ -0.41
VARS2-212ENST00000542001 ZNF479Q96JC4 524 aa12.52□□□□□ -0.41
VARS2-212ENST00000542001 GTSF1LQ9H1H1 148 aa12.52□□□□□ -0.41
VARS2-212ENST00000542001 DAZ1Q9NQZ3 744 aaKnown RBP12.52□□□□□ -0.41
VARS2-212ENST00000542001 TOMM7Q9P0U1 55 aa12.52□□□□□ -0.41
VARS2-212ENST00000542001 COL5A1P20908 1838 aaPredicted RBP12.52□□□□□ -0.41
VARS2-212ENST00000542001 CRYGCP07315 174 aa12.52□□□□□ -0.41
VARS2-212ENST00000542001 VCX2Q9H322 139 aa12.52□□□□□ -0.41
VARS2-212ENST00000542001 IGHV4-39P01824 125 aa12.51□□□□□ -0.41
VARS2-212ENST00000542001 DEFB131AP59861 70 aa12.51□□□□□ -0.41
VARS2-212ENST00000542001 DPH3P1Q9H4G8 78 aa12.51□□□□□ -0.41
VARS2-212ENST00000542001 OCIAD2Q56VL3 154 aa12.51□□□□□ -0.41
VARS2-212ENST00000542001 VWC2LB2RUY7 222 aa12.51□□□□□ -0.41
VARS2-212ENST00000542001 SAMD13Q5VXD3 122 aa12.51□□□□□ -0.41
VARS2-212ENST00000542001 C8orf31Q8N9H6 132 aa12.51□□□□□ -0.41
VARS2-212ENST00000542001 RRN3P1Q2M238 152 aa12.5□□□□□ -0.41
VARS2-212ENST00000542001 ORMDL2Q53FV1 153 aa12.5□□□□□ -0.41
VARS2-212ENST00000542001 IGF2-ASQ6U949 168 aa12.5□□□□□ -0.41
VARS2-212ENST00000542001 C19orf84I3L1E1 186 aa12.5□□□□□ -0.41
VARS2-212ENST00000542001 GAGE1Q13065 139 aa12.5□□□□□ -0.41
VARS2-212ENST00000542001 RNASE13Q5GAN3 156 aaKnown RBP12.5□□□□□ -0.41
VARS2-212ENST00000542001 CHAC1Q9BUX1 264 aa12.5□□□□□ -0.41
VARS2-212ENST00000542001 BUB3O43684 328 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 UNQ9165/PRO28630Q6UXU0 137 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 KLF12Q9Y4X4 402 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 LINC00310P59036 64 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 MEIG1Q5JSS6 88 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 BVES-AS1Q5T3Y7 98 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 C2orf66Q6UXQ4 117 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 RPL39LQ96EH5 51 aaKnown RBP12.49□□□□□ -0.41
VARS2-212ENST00000542001 KALRNO60229 2985 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 ATMQ13315 3056 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 SEC11AP67812 179 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 AMTNQ6UX39 209 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 MBD6Q96DN6 1003 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 MRAP2Q96G30 205 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 LINC00574Q9H8X3 128 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 FLNBO75369 2602 aaKnown RBP12.49□□□□□ -0.41
VARS2-212ENST00000542001 ZZEF1O43149 2961 aa12.49□□□□□ -0.41
VARS2-212ENST00000542001 C1orf122Q6ZSJ8 110 aa12.48□□□□□ -0.41
VARS2-212ENST00000542001 IGF1P05019 195 aa12.48□□□□□ -0.41
VARS2-212ENST00000542001 ANKRD17O75179 2603 aaKnown RBP12.48□□□□□ -0.41
VARS2-212ENST00000542001 C19orf71A6NCJ1 209 aa12.47□□□□□ -0.41
VARS2-212ENST00000542001 C2orf70A6NJV1 201 aa12.47□□□□□ -0.41
VARS2-212ENST00000542001 KLF5Q13887 457 aaPredicted RBP12.47□□□□□ -0.41
VARS2-212ENST00000542001 ZNF625Q96I27 306 aaPredicted RBP12.47□□□□□ -0.41
VARS2-212ENST00000542001 YAE1D1Q9NRH1 226 aa12.47□□□□□ -0.41
VARS2-212ENST00000542001 COX8AP10176 69 aa12.47□□□□□ -0.41
VARS2-212ENST00000542001 XCL2Q9UBD3 114 aa12.47□□□□□ -0.41
VARS2-212ENST00000542001 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
VARS2-212ENST00000542001 CD28P10747 220 aa12.47□□□□□ -0.41
VARS2-212ENST00000542001 OR9G4Q8NGQ1 327 aa12.47□□□□□ -0.41
VARS2-212ENST00000542001 IGHV3-38A0A0C4DH36 116 aa12.46□□□□□ -0.41
VARS2-212ENST00000542001 CD5LO43866 347 aa12.46□□□□□ -0.41
VARS2-212ENST00000542001 TRGV2A0A075B6R0 118 aa12.46□□□□□ -0.41
VARS2-212ENST00000542001 LYRM7Q5U5X0 104 aa12.46□□□□□ -0.41
VARS2-212ENST00000542001 KLHL30-AS1Q8NEE0 82 aa12.46□□□□□ -0.41
VARS2-212ENST00000542001 MLST8Q9BVC4 326 aa12.46□□□□□ -0.41
VARS2-212ENST00000542001 RPL13AP40429 203 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms