RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 DPH3Q96FX2 82 aa11.37□□□□□ -0.59
GCFC2-211ENST00000541687 FAM110DQ8TAY7 271 aaPredicted RBP11.37□□□□□ -0.59
GCFC2-211ENST00000541687 RHPN1-AS1Q9BWJ2 59 aa11.37□□□□□ -0.59
GCFC2-211ENST00000541687 TP73-AS1Q9UF72 201 aa11.37□□□□□ -0.59
GCFC2-211ENST00000541687 DSCAML1Q8TD84 2053 aa11.37□□□□□ -0.59
GCFC2-211ENST00000541687 TRBV7-1A0A0A6YYK4 115 aa11.37□□□□□ -0.59
GCFC2-211ENST00000541687 PAX1P15863 534 aa11.37□□□□□ -0.59
GCFC2-211ENST00000541687 PGPEP1Q9NXJ5 209 aa11.37□□□□□ -0.59
GCFC2-211ENST00000541687 CD5LO43866 347 aa11.36□□□□□ -0.59
GCFC2-211ENST00000541687 A0A087WWL8 130 aa11.36□□□□□ -0.59
GCFC2-211ENST00000541687 ETDBQ3ZM63 59 aa11.36□□□□□ -0.59
GCFC2-211ENST00000541687 C8orf86Q6ZUL3 223 aa11.36□□□□□ -0.59
GCFC2-211ENST00000541687 CST9LQ9H4G1 147 aa11.36□□□□□ -0.59
GCFC2-211ENST00000541687 IGHV2-70DA0A0C4DH43 119 aa11.35□□□□□ -0.59
GCFC2-211ENST00000541687 IGF2-ASQ6U949 168 aa11.35□□□□□ -0.59
GCFC2-211ENST00000541687 C9orf139Q6ZV77 190 aa11.35□□□□□ -0.59
GCFC2-211ENST00000541687 KLF5Q13887 457 aaPredicted RBP11.35□□□□□ -0.59
GCFC2-211ENST00000541687 ADAMTSL5Q6ZMM2 481 aa11.35□□□□□ -0.59
GCFC2-211ENST00000541687 MRPL52Q86TS9 123 aaKnown RBP11.35□□□□□ -0.59
GCFC2-211ENST00000541687 DKK2Q9UBU2 259 aa11.35□□□□□ -0.59
GCFC2-211ENST00000541687 NBL1P41271 181 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 ZNF747Q9BV97 191 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 OVOL1O14753 267 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 SMPXQ9UHP9 88 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 RNF114Q9Y508 228 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 IGHV7-81A0A0B4J1V7 117 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 F6UB75 175 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 PF4P02776 101 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 LRRK2Q5S007 2527 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 TRAV8-4A0A0B4J246 113 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 CTSGP08311 255 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 ESDP10768 282 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 NEGR1Q7Z3B1 354 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 OR11H6Q8NGC7 330 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 CHAC1Q9BUX1 264 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 LINC00574Q9H8X3 128 aa11.34□□□□□ -0.59
GCFC2-211ENST00000541687 M0R2P5 195 aa11.33□□□□□ -0.6
GCFC2-211ENST00000541687 DTX2Q86UW9 622 aa11.33□□□□□ -0.6
GCFC2-211ENST00000541687 AGPAT4-IT1Q9H0P7 198 aa11.33□□□□□ -0.6
GCFC2-211ENST00000541687 KLF12Q9Y4X4 402 aa11.33□□□□□ -0.6
GCFC2-211ENST00000541687 CRYGCP07315 174 aa11.33□□□□□ -0.6
GCFC2-211ENST00000541687 FOXE3Q13461 319 aa11.33□□□□□ -0.6
GCFC2-211ENST00000541687 HOXB4P17483 251 aaPredicted RBP11.33□□□□□ -0.6
GCFC2-211ENST00000541687 ZFP36P26651 326 aaKnown RBP11.33□□□□□ -0.6
GCFC2-211ENST00000541687 PRAC2D3DTV9 90 aa11.32□□□□□ -0.6
GCFC2-211ENST00000541687 ZFAND6Q6FIF0 208 aa11.32□□□□□ -0.6
GCFC2-211ENST00000541687 CSTL1Q9H114 145 aa11.32□□□□□ -0.6
GCFC2-211ENST00000541687 IGLV11-55A0A075B6I3 123 aa11.32□□□□□ -0.6
GCFC2-211ENST00000541687 ZNF625Q96I27 306 aaPredicted RBP11.32□□□□□ -0.6
GCFC2-211ENST00000541687 DLX4Q92988 240 aaPredicted RBP11.32□□□□□ -0.6
GCFC2-211ENST00000541687 CHCHD5Q9BSY4 110 aa11.32□□□□□ -0.6
GCFC2-211ENST00000541687 INS-IGF2F8WCM5 200 aa11.31□□□□□ -0.6
GCFC2-211ENST00000541687 C11orf68Q9H3H3 251 aaKnown RBP11.31□□□□□ -0.6
GCFC2-211ENST00000541687 LINC00158P58513 81 aa11.31□□□□□ -0.6
GCFC2-211ENST00000541687 DEFB1P60022 68 aa11.31□□□□□ -0.6
GCFC2-211ENST00000541687 ADORA2A-AS1P86434 159 aa11.31□□□□□ -0.6
GCFC2-211ENST00000541687 BVES-AS1Q5T3Y7 98 aa11.31□□□□□ -0.6
GCFC2-211ENST00000541687 LINC00477Q96M19 166 aa11.31□□□□□ -0.6
GCFC2-211ENST00000541687 DPH3P1Q9H4G8 78 aa11.31□□□□□ -0.6
GCFC2-211ENST00000541687 C9JAW5 83 aa11.31□□□□□ -0.6
GCFC2-211ENST00000541687 SPINK8P0C7L1 97 aa11.31□□□□□ -0.6
GCFC2-211ENST00000541687 COX8AP10176 69 aa11.31□□□□□ -0.6
GCFC2-211ENST00000541687 CFHR4Q92496 578 aa11.31□□□□□ -0.6
GCFC2-211ENST00000541687 PCP2Q8IVA1 136 aa11.3□□□□□ -0.6
GCFC2-211ENST00000541687 SPXQ9BT56 116 aa11.3□□□□□ -0.6
GCFC2-211ENST00000541687 FANCD2OSQ96PS1 177 aa11.3□□□□□ -0.6
GCFC2-211ENST00000541687 TNRC18O15417 2968 aaPredicted RBP11.3□□□□□ -0.6
GCFC2-211ENST00000541687 IGHV1-69DA0A0B4J2H0 117 aa11.3□□□□□ -0.6
GCFC2-211ENST00000541687 IGHV1-69P01742 117 aa11.3□□□□□ -0.6
GCFC2-211ENST00000541687 IGHV3-53P01767 116 aa11.3□□□□□ -0.6
GCFC2-211ENST00000541687 C2orf82Q6UX34 121 aa11.3□□□□□ -0.6
GCFC2-211ENST00000541687 TTTY13Q9BZ97 58 aa11.3□□□□□ -0.6
GCFC2-211ENST00000541687 ATXN8Q156A1 80 aa11.29□□□□□ -0.6
GCFC2-211ENST00000541687 ANKRD39Q53RE8 183 aa11.29□□□□□ -0.6
GCFC2-211ENST00000541687 MRPL35Q9NZE8 188 aaKnown RBP11.29□□□□□ -0.6
GCFC2-211ENST00000541687 ABCA12Q86UK0 2595 aa11.29□□□□□ -0.6
GCFC2-211ENST00000541687 TRAV8-3A0A0A6YYJ7 113 aa11.29□□□□□ -0.6
GCFC2-211ENST00000541687 TRGV4A0A0C4DH28 118 aa11.29□□□□□ -0.6
GCFC2-211ENST00000541687 C19orf71A6NCJ1 209 aa11.29□□□□□ -0.6
GCFC2-211ENST00000541687 RBMY1BA6NDE4 496 aaKnown RBP11.29□□□□□ -0.6
GCFC2-211ENST00000541687 RBMY1EA6NEQ0 496 aaKnown RBP11.29□□□□□ -0.6
GCFC2-211ENST00000541687 RBMY1DP0C7P1 496 aaKnown RBP11.29□□□□□ -0.6
GCFC2-211ENST00000541687 RBMY1A1P0DJD3 496 aaKnown RBP11.29□□□□□ -0.6
GCFC2-211ENST00000541687 RBMY1CP0DJD4 496 aa11.29□□□□□ -0.6
GCFC2-211ENST00000541687 SYNJ2BPP57105 145 aa11.29□□□□□ -0.6
GCFC2-211ENST00000541687 CFAP161Q6P656 301 aa11.29□□□□□ -0.6
GCFC2-211ENST00000541687 GATD1Q8NB37 220 aa11.29□□□□□ -0.6
GCFC2-211ENST00000541687 TMEM238C9JI98 176 aa11.29□□□□□ -0.6
GCFC2-211ENST00000541687 STHQ8IWL8 128 aa11.29□□□□□ -0.6
GCFC2-211ENST00000541687 MUC3AQ02505 3323 aa11.29□□□□□ -0.6
GCFC2-211ENST00000541687 CCL25O15444 150 aa11.28□□□□□ -0.6
GCFC2-211ENST00000541687 ANXA2RQ3ZCQ2 193 aa11.28□□□□□ -0.6
GCFC2-211ENST00000541687 PAX4O43316 350 aa11.28□□□□□ -0.6
GCFC2-211ENST00000541687 LOXL1Q08397 574 aaPredicted RBP11.28□□□□□ -0.6
GCFC2-211ENST00000541687 Q8N9W7 124 aa11.28□□□□□ -0.6
GCFC2-211ENST00000541687 POLQO75417 2590 aa11.28□□□□□ -0.6
GCFC2-211ENST00000541687 TRAV12-2A0A075B6T6 113 aa11.28□□□□□ -0.6
GCFC2-211ENST00000541687 C2orf70A6NJV1 201 aa11.28□□□□□ -0.6
GCFC2-211ENST00000541687 DAZ1Q9NQZ3 744 aaKnown RBP11.28□□□□□ -0.6
GCFC2-211ENST00000541687 B4DSR2 109 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms