RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 H7BZZ5 65 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 DNAL4O96015 105 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 CD24P25063 80 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 UBE2E1P51965 193 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 APOC4P55056 127 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 UBE2BP63146 152 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 DEFB134Q4QY38 66 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 C2orf83Q53S99 150 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 CLLU1OSQ5K130 101 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 Q6ZPA2 131 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 COX8CQ7Z4L0 72 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 Q86TA4 180 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 WDR86Q86TI4 376 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 DYNAPQ8N1N2 210 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 EEF1AKMT3Q96AZ1 226 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 FXYD5Q96DB9 178 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 PLPPR2Q96GM1 343 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 UBE2E2Q96LR5 201 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 CNFNQ9BYD5 112 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 ZNF71Q9NQZ8 489 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-218ENST00000541615 TMEM14CQ9P0S9 112 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 UBE2D4Q9Y2X8 147 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 PDE4DIPQ5VU43 2346 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 PTPRBP23467 1997 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 IGKV1-27A0A075B6S5 117 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 PRSS38A1L453 326 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 M0R3E3 92 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 TRIAP1O43715 76 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 ERC2-IT1O76042 136 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-218ENST00000541615 PVRIGQ6DKI7 326 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 VN1R4Q7Z5H5 301 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 SMCR5Q8TEV8 140 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 TOMM6Q96B49 74 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 COX14Q96I36 57 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 TMEM141Q96I45 108 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 C17orf77Q96MU5 243 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 PRR25Q96S07 402 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 Q9H3A6 140 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 C11orf68Q9H3H3 251 aaKnown RBP3.94□□□□□ -1.78
SNHG1-218ENST00000541615 RBM12B-AS1Q9P1G2 102 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 EML5Q05BV3 1969 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 PCDH15Q96QU1 1955 aa3.94□□□□□ -1.78
SNHG1-218ENST00000541615 IGLV3-32A0A0A0MS00 114 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 A0A0J9YXY3 114 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 A0A1W2PP55 124 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 TMEM30CPA0ZSE6 113 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 H3BS24 57 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 PDE6HQ13956 83 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 ECSCRQ19T08 205 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 Q1T7F1 81 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 ESRGQ1W209 222 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 FAM27BQ5VT28 67 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 LYZL1Q6UWQ5 148 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 WFDC3Q8IUB2 231 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 C20orf197Q8N268 126 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 CYSTM1Q9H1C7 97 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 PCNX3Q9H6A9 2034 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 SCN10AQ9Y5Y9 1956 aa3.93□□□□□ -1.78
SNHG1-218ENST00000541615 SHANK1Q9Y566 2161 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 HEATR5BQ9P2D3 2071 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 IGLV2-18A0A075B6J9 118 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 IGKV1D-43A0A0B4J1Z2 117 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-218ENST00000541615 C17orf98A8MV24 154 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 SMKR1H3BMG3 65 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 OVOL3O00110 214 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 CCL21O00585 134 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 LEPROTO15243 131 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 GRPP07492 148 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 BLCAPP62952 87 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 ERHP84090 104 aaKnown RBP3.92□□□□□ -1.78
SNHG1-218ENST00000541615 GFRALQ6UXV0 394 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 LINC00322Q6ZN03 302 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-218ENST00000541615 PHF5AQ7RTV0 110 aaKnown RBP3.92□□□□□ -1.78
SNHG1-218ENST00000541615 THAP8Q8NA92 274 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 TMEM14BQ9NUH8 114 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-218ENST00000541615 TNRC18O15417 2968 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-218ENST00000541615 PHF3Q92576 2039 aaKnown RBP3.92□□□□□ -1.78
SNHG1-218ENST00000541615 MYO9BQ13459 2157 aa3.92□□□□□ -1.78
SNHG1-218ENST00000541615 IGHV1OR21-1A0A087WYE8 117 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 A0A096LPE4 126 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 TRAV8-3A0A0A6YYJ7 113 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 A0A1W2PPZ6 126 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 FAM223BA6NKX1 122 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 COX7A2LO14548 114 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 SH2D1AO60880 128 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 IGHV3-13P01766 116 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 BAALC-AS2P0C853 105 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 ZNF80P51504 273 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-218ENST00000541615 ZNF134P52741 427 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 PRCDQ00LT1 54 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 NSUN5P1Q3KNT7 163 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 ZNF876PQ49A33 203 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 Q6ZVQ6 151 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 VMO1Q7Z5L0 202 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 PRNTQ86SH4 94 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 MUSTN1Q8IVN3 82 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 FAM223AQ8IWN6 122 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 223.2 ms