RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 TMEM267Q0VDI3 215 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF345Q14585 488 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 PYDC2Q56P42 97 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 SPANXN3Q5MJ09 141 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 SPATA31B1PQ5VZV4 182 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 ATP5L2Q7Z4Y8 100 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF567Q8N184 647 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 FAM24BQ8N5W8 94 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF615Q8N8J6 731 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 CNEP1R1Q8N9A8 125 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 OR51T1Q8NGJ9 327 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 OR5D16Q8NGK9 328 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 OR4C13Q8NGP0 309 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 PP6455Q8WZ26 134 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 POP5Q969H6 163 aaKnown RBP2.51□□□□□ -2.01
SNHG1-217ENST00000541578 MUCL1Q96DR8 90 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 RMI2Q96E14 147 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 ABHD14BQ96IU4 210 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 ADAT1Q9BUB4 502 aaKnown RBP2.51□□□□□ -2.01
SNHG1-217ENST00000541578 DERL1Q9BUN8 251 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF471Q9BX82 626 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-217ENST00000541578 SMIM3Q9BZL3 60 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 OR51I2Q9H344 312 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 POPDC3Q9HBV1 291 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 FKBP11Q9NYL4 201 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 CACFD1Q9UGQ2 172 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 CYSLTR1Q9Y271 337 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 WASHC3Q9Y3C0 194 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 NBEAL2Q6ZNJ1 2754 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 VWFP04275 2813 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 IGKV3D-11A0A0A0MRZ8 115 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 LOC100130705A0A1B0GUX0 176 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 KANTRA0A1W2PQU2 76 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 hADV38S2A0JD32 116 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 DHRS12A0PJE2 317 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 MEIS3P1A6NDR6 274 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 GGT3PA6NGU5 568 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 TRGV3P03979 118 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 PFN1P07737 140 aaKnown RBP2.5□□□□□ -2.01
SNHG1-217ENST00000541578 IL3P08700 152 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 SFTA3P0C7M3 94 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 IGLC1P0CG04 106 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 CCL3P10147 92 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 CXCL3P19876 107 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 SRIP30626 198 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 RPL22P35268 128 aaKnown RBP2.5□□□□□ -2.01
SNHG1-217ENST00000541578 EFNA4P52798 201 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 LINC00315P59091 139 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 LCN6P62502 163 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 DYNLT1P63172 113 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 TNFAIP6P98066 277 aaPredicted RBP2.5□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF791Q3KP31 576 aaPredicted RBP2.5□□□□□ -2.01
SNHG1-217ENST00000541578 DEFB134Q4QY38 66 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 BCL2L15Q5TBC7 163 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 TEX36Q5VZQ5 186 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 LCN8Q6JVE9 175 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 MRPL54Q6P161 138 aaKnown RBP2.5□□□□□ -2.01
SNHG1-217ENST00000541578 LYZL2Q7Z4W2 148 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 TTC9CQ8N5M4 171 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 RNF182Q8N6D2 247 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 OR51A2Q8NGJ7 313 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF675Q8TD23 568 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 MBD3L1Q8WWY6 194 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 TSLPQ969D9 159 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 DIRAS2Q96HU8 199 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 IMMP2LQ96T52 175 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 VAMP8Q9BV40 100 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 SPANXDQ9BXN6 97 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 DPY30Q9C005 99 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 ATG5Q9H1Y0 275 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 TMEM133Q9H2Q1 129 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 SMDT1Q9H4I9 107 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 HES4Q9HCC6 221 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 WNK1Q9H4A3 2382 aa2.5□□□□□ -2.01
SNHG1-217ENST00000541578 WNK2Q9Y3S1 2297 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 EXPH5Q8NEV8 1989 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 ARFGEF3Q5TH69 2177 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 IGHV3OR16-8A0A075B7F1 116 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 A0A0B4J2C4 111 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 TMEM235A6NFC5 223 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 OR4C46A6NHA9 309 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 SNRPGP15A8MWD9 76 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 B4DSR2 109 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 H3BQ15 152 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 H7C1C5 153 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 CDC42EP2O14613 210 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 LTAP01374 205 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 TRGC1P0CF51 173 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 CDK2P24941 298 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 GLRXP35754 106 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 GUCA1AP43080 201 aaPredicted RBP2.49□□□□□ -2.01
SNHG1-217ENST00000541578 OR1E2P47887 323 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 EMP1P54849 157 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 HSPE1P61604 102 aaKnown RBP2.49□□□□□ -2.01
SNHG1-217ENST00000541578 AKR1C1Q04828 323 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 GLIPR1L1Q6UWM5 242 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 KCNRGQ8N5I3 272 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 TMEM75Q8N9X5 138 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.49□□□□□ -2.01
SNHG1-217ENST00000541578 OR1L8Q8NGR8 309 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms