RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 NAA38Q9BRA0 125 aaKnown RBP11.71□□□□□ -0.54
CLPTM1-202ENST00000541297 NPFFR1Q9GZQ6 430 aa11.71□□□□□ -0.54
CLPTM1-202ENST00000541297 ZNF702PQ9H963 129 aa11.71□□□□□ -0.54
CLPTM1-202ENST00000541297 IGHV3-49A0A0A0MS15 119 aa11.7□□□□□ -0.54
CLPTM1-202ENST00000541297 FXYD7P58549 80 aa11.7□□□□□ -0.54
CLPTM1-202ENST00000541297 SERTM2A0A1B0GWG4 89 aa11.7□□□□□ -0.54
CLPTM1-202ENST00000541297 OR4X2Q8NGF9 303 aa11.7□□□□□ -0.54
CLPTM1-202ENST00000541297 USMG5Q96IX5 58 aa11.7□□□□□ -0.54
CLPTM1-202ENST00000541297 JMJD8Q96S16 334 aa11.7□□□□□ -0.54
CLPTM1-202ENST00000541297 MRPS12O15235 138 aaKnown RBP11.69□□□□□ -0.54
CLPTM1-202ENST00000541297 GATD1Q8NB37 220 aa11.69□□□□□ -0.54
CLPTM1-202ENST00000541297 PSG8Q9UQ74 426 aa11.69□□□□□ -0.54
CLPTM1-202ENST00000541297 UFSP1Q6NVU6 142 aa11.69□□□□□ -0.54
CLPTM1-202ENST00000541297 SIGLEC8Q9NYZ4 499 aa11.69□□□□□ -0.54
CLPTM1-202ENST00000541297 TRBV19A0A075B6N1 114 aa11.68□□□□□ -0.54
CLPTM1-202ENST00000541297 CLPSL1A2RUU4 121 aa11.68□□□□□ -0.54
CLPTM1-202ENST00000541297 D6R8Y8 96 aa11.68□□□□□ -0.54
CLPTM1-202ENST00000541297 H3BUT2 72 aa11.68□□□□□ -0.54
CLPTM1-202ENST00000541297 PSMB8P28062 276 aa11.68□□□□□ -0.54
CLPTM1-202ENST00000541297 FER1L6-AS1Q8NA97 138 aa11.68□□□□□ -0.54
CLPTM1-202ENST00000541297 AP1S3Q96PC3 154 aa11.68□□□□□ -0.54
CLPTM1-202ENST00000541297 TRBV6-1A0A0K0K1D8 114 aa11.68□□□□□ -0.54
CLPTM1-202ENST00000541297 C9orf118A6NHY6 69 aa11.68□□□□□ -0.54
CLPTM1-202ENST00000541297 IGHG4P01861 327 aa11.68□□□□□ -0.54
CLPTM1-202ENST00000541297 TEX29Q8N6K0 151 aa11.68□□□□□ -0.54
CLPTM1-202ENST00000541297 TMEM75Q8N9X5 138 aa11.68□□□□□ -0.54
CLPTM1-202ENST00000541297 TMEM213A2RRL7 107 aa11.67□□□□□ -0.54
CLPTM1-202ENST00000541297 H3BRM9 83 aa11.67□□□□□ -0.54
CLPTM1-202ENST00000541297 BRI3O95415 125 aa11.67□□□□□ -0.54
CLPTM1-202ENST00000541297 TMSB15BA0A087X1C1 80 aa11.67□□□□□ -0.54
CLPTM1-202ENST00000541297 A0A0G2JLM5 398 aa11.67□□□□□ -0.54
CLPTM1-202ENST00000541297 A0A1B0GW15 77 aa11.67□□□□□ -0.54
CLPTM1-202ENST00000541297 CACNG7P62955 275 aa11.67□□□□□ -0.54
CLPTM1-202ENST00000541297 PSG3Q16557 428 aa11.67□□□□□ -0.54
CLPTM1-202ENST00000541297 UNQ9165/PRO28630Q6UXU0 137 aa11.67□□□□□ -0.54
CLPTM1-202ENST00000541297 GTF2H5Q6ZYL4 71 aa11.67□□□□□ -0.54
CLPTM1-202ENST00000541297 BOD1L2Q8IYS8 172 aa11.67□□□□□ -0.54
CLPTM1-202ENST00000541297 DPF1Q92782 380 aa11.67□□□□□ -0.54
CLPTM1-202ENST00000541297 C8orf49Q96NF6 230 aa11.67□□□□□ -0.54
CLPTM1-202ENST00000541297 A6NDN8 102 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 DNAJC9-AS1A6NH13 148 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 M0R3E3 92 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 SIGLEC15Q6ZMC9 328 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 AMN1Q8IY45 258 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 WFDC12Q8WWY7 111 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 ZNF580Q9UK33 172 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 KIR3DS1Q14943 382 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 LYZL1Q6UWQ5 148 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 ZNF493Q6ZR52 646 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 RAB37Q96AX2 223 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 PRELID3AQ96N28 172 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 ESM1Q9NQ30 184 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 BUB3O43684 328 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 RPL7P18124 248 aaKnown RBP11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 LGALS9BQ3B8N2 356 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 LGALS9CQ6DKI2 356 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 OR1N2Q8NGR9 330 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 METTL26Q96S19 204 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 SMAD5-AS1Q9Y6J3 95 aa11.66□□□□□ -0.54
CLPTM1-202ENST00000541297 K7EQM0 130 aa11.65□□□□□ -0.54
CLPTM1-202ENST00000541297 ATP6V0BQ99437 205 aa11.65□□□□□ -0.54
CLPTM1-202ENST00000541297 IGFL4Q6B9Z1 124 aa11.65□□□□□ -0.55
CLPTM1-202ENST00000541297 HIVEP2P31629 2446 aa11.64□□□□□ -0.55
CLPTM1-202ENST00000541297 K7EP34 96 aa11.64□□□□□ -0.55
CLPTM1-202ENST00000541297 FAM104BQ5XKR9 115 aa11.64□□□□□ -0.55
CLPTM1-202ENST00000541297 Q6AWC8 147 aa11.64□□□□□ -0.55
CLPTM1-202ENST00000541297 ADAMTSL5Q6ZMM2 481 aa11.64□□□□□ -0.55
CLPTM1-202ENST00000541297 PCP2Q8IVA1 136 aa11.64□□□□□ -0.55
CLPTM1-202ENST00000541297 U3KQK5 164 aa11.64□□□□□ -0.55
CLPTM1-202ENST00000541297 HSD52Q0P140 79 aa11.63□□□□□ -0.55
CLPTM1-202ENST00000541297 MRPL51Q4U2R6 128 aaKnown RBP11.63□□□□□ -0.55
CLPTM1-202ENST00000541297 ORMDL3Q8N138 153 aa11.63□□□□□ -0.55
CLPTM1-202ENST00000541297 SMKR1H3BMG3 65 aa11.63□□□□□ -0.55
CLPTM1-202ENST00000541297 CT45A10P0DMU9 189 aa11.63□□□□□ -0.55
CLPTM1-202ENST00000541297 NMUP48645 174 aa11.63□□□□□ -0.55
CLPTM1-202ENST00000541297 OR2K2Q8NGT1 345 aa11.63□□□□□ -0.55
CLPTM1-202ENST00000541297 SETD2Q9BYW2 2564 aaPredicted RBP11.62□□□□□ -0.55
CLPTM1-202ENST00000541297 TMEM189A5PLL7 270 aa11.62□□□□□ -0.55
CLPTM1-202ENST00000541297 G3V4G9 280 aa11.62□□□□□ -0.55
CLPTM1-202ENST00000541297 NDUFA4O00483 81 aa11.62□□□□□ -0.55
CLPTM1-202ENST00000541297 HBDP02042 147 aa11.62□□□□□ -0.55
CLPTM1-202ENST00000541297 HIST2H2BDQ6DRA6 164 aa11.62□□□□□ -0.55
CLPTM1-202ENST00000541297 WFDC3Q8IUB2 231 aa11.62□□□□□ -0.55
CLPTM1-202ENST00000541297 TMEM86BQ8N661 226 aa11.62□□□□□ -0.55
CLPTM1-202ENST00000541297 OR9G4Q8NGQ1 327 aa11.62□□□□□ -0.55
CLPTM1-202ENST00000541297 IFI27L1Q96BM0 104 aa11.62□□□□□ -0.55
CLPTM1-202ENST00000541297 FLNBO75369 2602 aaKnown RBP11.62□□□□□ -0.55
CLPTM1-202ENST00000541297 HLA-DMBP28068 263 aa11.61□□□□□ -0.55
CLPTM1-202ENST00000541297 LYPD1Q8N2G4 141 aa11.61□□□□□ -0.55
CLPTM1-202ENST00000541297 AAMDCQ9H7C9 122 aa11.61□□□□□ -0.55
CLPTM1-202ENST00000541297 LY6G6DO95868 133 aa11.61□□□□□ -0.55
CLPTM1-202ENST00000541297 PDE6HQ13956 83 aa11.61□□□□□ -0.55
CLPTM1-202ENST00000541297 Q8N2B8 174 aa11.61□□□□□ -0.55
CLPTM1-202ENST00000541297 DKK2Q9UBU2 259 aa11.61□□□□□ -0.55
CLPTM1-202ENST00000541297 SIVA1O15304 175 aa11.6□□□□□ -0.55
CLPTM1-202ENST00000541297 SH2D1AO60880 128 aa11.6□□□□□ -0.55
CLPTM1-202ENST00000541297 NPYP01303 97 aa11.6□□□□□ -0.55
CLPTM1-202ENST00000541297 TM4SF20Q53R12 229 aa11.6□□□□□ -0.55
CLPTM1-202ENST00000541297 Q6ZSV7 163 aa11.6□□□□□ -0.55
CLPTM1-202ENST00000541297 EDN2P20800 178 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms