RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SPANXB1Q9NS25 103 aaPredicted RBP4.14□□□□□ -1.75
PROM1-220ENST00000540805 TRBV7-9A0A0J9YWB2 115 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 RPL13AP40429 203 aaKnown RBP4.13□□□□□ -1.75
PROM1-220ENST00000540805 CACNG7P62955 275 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 TMEM30BQ3MIR4 351 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 SYT8Q8NBV8 401 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 TRAV41A0A0B4J266 112 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 SPINK8P0C7L1 97 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 IGHV1-8P0DP01 117 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 GP9P14770 177 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 XGP55808 180 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 WT1-ASQ06250 92 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 ZNF415Q09FC8 603 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 MSMPQ1L6U9 139 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 IGFL4Q6B9Z1 124 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 C22orf34Q6ZV56 151 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 MRAPQ8TCY5 172 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 KIR2DL4Q99706 377 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 MRPL36Q9P0J6 103 aaKnown RBP4.13□□□□□ -1.75
PROM1-220ENST00000540805 TRAV8-1A0A0A6YYK1 113 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 E7EUB6 86 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 IGHV3-53P01767 116 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 CD7P09564 240 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 IFI27P40305 119 aaPredicted RBP4.13□□□□□ -1.75
PROM1-220ENST00000540805 DUX4L9Q6RFH8 374 aaPredicted RBP4.13□□□□□ -1.75
PROM1-220ENST00000540805 GATD1Q8NB37 220 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 TMEM167AQ8TBQ9 72 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 ZNF414Q96IQ9 312 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 DPH3P1Q9H4G8 78 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 OTORQ9NRC9 128 aa4.13□□□□□ -1.75
PROM1-220ENST00000540805 NPFFO15130 113 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 MSMBP08118 114 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 SMIM13P0DJ93 91 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 SYNJ2BPP57105 145 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 SPRNQ5BIV9 151 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 ZNF833PQ6ZTB9 187 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 MRAP2Q96G30 205 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 TRGV9Q99603 122 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 NHP2Q9NX24 153 aaKnown RBP4.12□□□□□ -1.75
PROM1-220ENST00000540805 FAM215AQ9Y5M1 114 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 DSCAMO60469 2012 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 IGKV2D-26A0A0A0MRZ7 120 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 A0A0U1RRA0 63 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 NPIPB5A8MRT5 1133 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 TSPAN13O95857 204 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 IGLV1-44P01699 117 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 C5orf64Q2M2E5 130 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 HIST2H2BCQ6DN03 193 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 CITED1Q99966 193 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 PEMTQ9UBM1 199 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 TEP1Q99973 2627 aaKnown RBP4.12□□□□□ -1.75
PROM1-220ENST00000540805 A0A096LNJ9 63 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 CCDC179H3BU77 68 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 TNFRSF13BO14836 293 aaPredicted RBP4.12□□□□□ -1.75
PROM1-220ENST00000540805 LHBP01229 141 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 HBDP02042 147 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 PAX8Q06710 450 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 MEIG1Q5JSS6 88 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 Q6AWC8 147 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 GTSCR1Q86UQ5 136 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 NFE4Q86UQ8 179 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 RNF125Q96EQ8 232 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 PRELID3AQ96N28 172 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 GAFA1Q96PS6 74 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 SIGLEC8Q9NYZ4 499 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 MOB4Q9Y3A3 225 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 TNFRSF18Q9Y5U5 241 aa4.12□□□□□ -1.75
PROM1-220ENST00000540805 RAI1Q7Z5J4 1906 aaPredicted RBP4.11□□□□□ -1.75
PROM1-220ENST00000540805 MUC4Q99102 2169 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 IGHV3-73A0A0B4J1V6 119 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 TRGV4A0A0C4DH28 118 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 IGHV1-3A0A0C4DH29 117 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 D6R8Y8 96 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 G3V318 75 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 J3QR89 54 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 OVOL3O00110 214 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 DEFB130BP0DP73 79 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 DEFB130AP0DP74 79 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 GATA4P43694 442 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 OR13C6PQ8NH95 151 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 SLC25A39Q9BZJ4 359 aaPredicted RBP4.11□□□□□ -1.75
PROM1-220ENST00000540805 CDIP1Q9H305 208 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 ARHGAP32A7KAX9 2087 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 PRSS29PA6NIE9 313 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 PRTN3P24158 256 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 DSCR9P59020 149 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 HERVK_113P61574 105 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 LINC01356Q8N9X3 169 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 IFI27L1Q96BM0 104 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 LINC00574Q9H8X3 128 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 TRBV6-1A0A0K0K1D8 114 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 A0A1W2PPI3 338 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 FCN3O75636 299 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 PPP1R17O96001 155 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 ORMDL3Q8N138 153 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 BCL6BQ8N143 479 aaPredicted RBP4.11□□□□□ -1.75
PROM1-220ENST00000540805 EXOC3-AS1Q8N2X6 119 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 Q8NA96 180 aa4.11□□□□□ -1.75
PROM1-220ENST00000540805 IGLV2-11P01706 119 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 CRYGCP07315 174 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms