RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 KLLNB2CW77 178 aa15.05■□□□□ 0
TNFRSF1A-205ENST00000534885 M0R2Z0 102 aa15.05■□□□□ 0
TNFRSF1A-205ENST00000534885 DNLZQ5SXM8 178 aa15.05■□□□□ 0
TNFRSF1A-205ENST00000534885 MRPL54Q6P161 138 aaKnown RBP15.05■□□□□ 0
TNFRSF1A-205ENST00000534885 OR2K2Q8NGT1 345 aa15.05■□□□□ 0
TNFRSF1A-205ENST00000534885 PGLYRP4Q96LB8 373 aa15.05■□□□□ 0
TNFRSF1A-205ENST00000534885 ZNF747Q9BV97 191 aa15.05■□□□□ 0
TNFRSF1A-205ENST00000534885 IGKV3D-20A0A0C4DH25 116 aa15.05■□□□□ -0
TNFRSF1A-205ENST00000534885 H3BMM0 161 aa15.05■□□□□ -0
TNFRSF1A-205ENST00000534885 FABP4P15090 132 aa15.05■□□□□ -0
TNFRSF1A-205ENST00000534885 CDPF1Q6NVV7 123 aa15.05■□□□□ -0
TNFRSF1A-205ENST00000534885 AMTNQ6UX39 209 aa15.05■□□□□ -0
TNFRSF1A-205ENST00000534885 ODF3Q96PU9 254 aa15.05■□□□□ -0
TNFRSF1A-205ENST00000534885 FAM231BA6NCW3 169 aa15.04■□□□□ -0
TNFRSF1A-205ENST00000534885 LINC01559Q495D7 138 aa15.04■□□□□ -0
TNFRSF1A-205ENST00000534885 SPINK13Q1W4C9 94 aa15.04■□□□□ -0
TNFRSF1A-205ENST00000534885 CD7P09564 240 aa15.03■□□□□ -0
TNFRSF1A-205ENST00000534885 Q6AWC8 147 aa15.03■□□□□ -0
TNFRSF1A-205ENST00000534885 C3orf56Q8N813 242 aa15.03■□□□□ -0
TNFRSF1A-205ENST00000534885 TRAV12-2A0A075B6T6 113 aa15.02■□□□□ -0
TNFRSF1A-205ENST00000534885 TRAV21A0A0B4J279 112 aa15.02■□□□□ -0
TNFRSF1A-205ENST00000534885 GRIFINA4D1Z8 144 aa15.02■□□□□ -0
TNFRSF1A-205ENST00000534885 RBMY1BA6NDE4 496 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-205ENST00000534885 RBMY1EA6NEQ0 496 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-205ENST00000534885 OR11H12B2RN74 326 aa15.02■□□□□ -0
TNFRSF1A-205ENST00000534885 RBMY1DP0C7P1 496 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-205ENST00000534885 LEPP41159 167 aa15.02■□□□□ -0
TNFRSF1A-205ENST00000534885 FOXA3P55318 350 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-205ENST00000534885 BEAN1Q3B7T3 259 aa15.02■□□□□ -0
TNFRSF1A-205ENST00000534885 HIST1H2BLQ99880 126 aa15.02■□□□□ -0
TNFRSF1A-205ENST00000534885 TPPP3Q9BW30 176 aa15.02■□□□□ -0
TNFRSF1A-205ENST00000534885 COL6A5A8TX70 2615 aa15.02□□□□□ -0.01
TNFRSF1A-205ENST00000534885 XKRY2A2RUG3 117 aa15.02□□□□□ -0.01
TNFRSF1A-205ENST00000534885 A8MTW9 85 aa15.02□□□□□ -0.01
TNFRSF1A-205ENST00000534885 PACRGQ96M98 296 aaPredicted RBP15.02□□□□□ -0.01
TNFRSF1A-205ENST00000534885 NAGKQ9UJ70 344 aa15.02□□□□□ -0.01
TNFRSF1A-205ENST00000534885 CDKN1BP46527 198 aa15.01□□□□□ -0.01
TNFRSF1A-205ENST00000534885 FXYD7P58549 80 aa15.01□□□□□ -0.01
TNFRSF1A-205ENST00000534885 RPS20P60866 119 aaKnown RBP15.01□□□□□ -0.01
TNFRSF1A-205ENST00000534885 C9orf66Q5T8R8 295 aa15.01□□□□□ -0.01
TNFRSF1A-205ENST00000534885 TRAV12-3A0A0B4J271 114 aa15□□□□□ -0.01
TNFRSF1A-205ENST00000534885 INSL3P51460 131 aa15□□□□□ -0.01
TNFRSF1A-205ENST00000534885 COA6Q5JTJ3 125 aaKnown RBP15□□□□□ -0.01
TNFRSF1A-205ENST00000534885 MUC21Q5SSG8 566 aa15□□□□□ -0.01
TNFRSF1A-205ENST00000534885 C12orf54Q6X4T0 127 aa15□□□□□ -0.01
TNFRSF1A-205ENST00000534885 WFDC10AQ9H1F0 79 aa15□□□□□ -0.01
TNFRSF1A-205ENST00000534885 C7orf71A4D174 169 aa14.99□□□□□ -0.01
TNFRSF1A-205ENST00000534885 TSPOP30536 169 aa14.99□□□□□ -0.01
TNFRSF1A-205ENST00000534885 TMEM158Q8WZ71 300 aa14.99□□□□□ -0.01
TNFRSF1A-205ENST00000534885 ARMS2P0C7Q2 107 aa14.99□□□□□ -0.01
TNFRSF1A-205ENST00000534885 IGLC6P0CF74 106 aa14.99□□□□□ -0.01
TNFRSF1A-205ENST00000534885 LYZL1Q6UWQ5 148 aa14.99□□□□□ -0.01
TNFRSF1A-205ENST00000534885 C19orf73Q9NVV2 129 aa14.99□□□□□ -0.01
TNFRSF1A-205ENST00000534885 A0A1B0GXF2 115 aa14.98□□□□□ -0.01
TNFRSF1A-205ENST00000534885 SNURFLB1AK76 121 aa14.98□□□□□ -0.01
TNFRSF1A-205ENST00000534885 ZNF324O75467 553 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1A-205ENST00000534885 ANXA2RQ3ZCQ2 193 aa14.98□□□□□ -0.01
TNFRSF1A-205ENST00000534885 FER1L6-AS1Q8NA97 138 aa14.98□□□□□ -0.01
TNFRSF1A-205ENST00000534885 WFDC9Q8NEX5 89 aa14.98□□□□□ -0.01
TNFRSF1A-205ENST00000534885 TRAPPC1Q9Y5R8 145 aa14.98□□□□□ -0.01
TNFRSF1A-205ENST00000534885 MUC21A0A0G2JKD1 596 aa14.97□□□□□ -0.01
TNFRSF1A-205ENST00000534885 MUC21A0A140T8X8 626 aa14.97□□□□□ -0.01
TNFRSF1A-205ENST00000534885 CAMPP49913 170 aa14.97□□□□□ -0.01
TNFRSF1A-205ENST00000534885 SHISA2Q6UWI4 295 aa14.97□□□□□ -0.01
TNFRSF1A-205ENST00000534885 TMEM136Q6ZRR5 245 aa14.97□□□□□ -0.01
TNFRSF1A-205ENST00000534885 ATP5L2Q7Z4Y8 100 aa14.97□□□□□ -0.01
TNFRSF1A-205ENST00000534885 STHQ8IWL8 128 aa14.97□□□□□ -0.01
TNFRSF1A-205ENST00000534885 A0A1B0GUT8 65 aa14.96□□□□□ -0.01
TNFRSF1A-205ENST00000534885 CRXO43186 299 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF1A-205ENST00000534885 AMBPP02760 352 aa14.96□□□□□ -0.01
TNFRSF1A-205ENST00000534885 IGLL1P15814 213 aa14.96□□□□□ -0.01
TNFRSF1A-205ENST00000534885 RAB4BP61018 213 aa14.96□□□□□ -0.01
TNFRSF1A-205ENST00000534885 PRR31Q5SQ13 230 aa14.96□□□□□ -0.01
TNFRSF1A-205ENST00000534885 FAM110AQ9BQ89 295 aa14.96□□□□□ -0.01
TNFRSF1A-205ENST00000534885 GNB1LQ9BYB4 327 aa14.96□□□□□ -0.01
TNFRSF1A-205ENST00000534885 CTRLP40313 264 aa14.96□□□□□ -0.02
TNFRSF1A-205ENST00000534885 HBBP68871 147 aa14.96□□□□□ -0.02
TNFRSF1A-205ENST00000534885 CBY1Q9Y3M2 126 aa14.96□□□□□ -0.02
TNFRSF1A-205ENST00000534885 CMC4P56277 68 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-205ENST00000534885 JOSD1Q15040 202 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-205ENST00000534885 RASL11AQ6T310 242 aa14.95□□□□□ -0.02
TNFRSF1A-205ENST00000534885 TRPT1Q86TN4 253 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-205ENST00000534885 RBMY1A1P0DJD3 496 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1A-205ENST00000534885 RBMY1CP0DJD4 496 aa14.94□□□□□ -0.02
TNFRSF1A-205ENST00000534885 DEFA6Q01524 100 aa14.94□□□□□ -0.02
TNFRSF1A-205ENST00000534885 RBMY1FQ15415 496 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1A-205ENST00000534885 MRPL18Q9H0U6 180 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1A-205ENST00000534885 GNRH2O43555 120 aa14.94□□□□□ -0.02
TNFRSF1A-205ENST00000534885 PKIAP61925 76 aa14.94□□□□□ -0.02
TNFRSF1A-205ENST00000534885 WDR73Q6P4I2 378 aa14.94□□□□□ -0.02
TNFRSF1A-205ENST00000534885 CLUHP3Q96NS8 147 aa14.94□□□□□ -0.02
TNFRSF1A-205ENST00000534885 MCRIP2Q9BUT9 160 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1A-205ENST00000534885 FAM159AQ6UWV7 190 aa14.93□□□□□ -0.02
TNFRSF1A-205ENST00000534885 SSBP4Q9BWG4 385 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1A-205ENST00000534885 H3BVH4 76 aa14.92□□□□□ -0.02
TNFRSF1A-205ENST00000534885 HLA-DQA1P01909 254 aa14.92□□□□□ -0.02
TNFRSF1A-205ENST00000534885 MT-ND6P03923 174 aa14.92□□□□□ -0.02
TNFRSF1A-205ENST00000534885 COX19Q49B96 90 aa14.92□□□□□ -0.02
TNFRSF1A-205ENST00000534885 BORCS7Q96B45 105 aa14.92□□□□□ -0.02
TNFRSF1A-205ENST00000534885 SLAQ13239 276 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms