RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 ZNF414Q96IQ9 312 aa3.18□□□□□ -1.9
ITGB1-219ENST00000534049 FAM19A4Q96LR4 140 aa3.18□□□□□ -1.9
ITGB1-219ENST00000534049 C2orf48Q96LS8 159 aa3.18□□□□□ -1.9
ITGB1-219ENST00000534049 C18orf15Q96N68 181 aa3.18□□□□□ -1.9
ITGB1-219ENST00000534049 HIST1H4GQ99525 98 aa3.18□□□□□ -1.9
ITGB1-219ENST00000534049 WFDC6Q9BQY6 131 aa3.18□□□□□ -1.9
ITGB1-219ENST00000534049 DPH3P1Q9H4G8 78 aa3.18□□□□□ -1.9
ITGB1-219ENST00000534049 PDFQ9HBH1 243 aa3.18□□□□□ -1.9
ITGB1-219ENST00000534049 TMEM167BQ9NRX6 74 aa3.18□□□□□ -1.9
ITGB1-219ENST00000534049 PSENENQ9NZ42 101 aa3.18□□□□□ -1.9
ITGB1-219ENST00000534049 LSM7Q9UK45 103 aaKnown RBP3.18□□□□□ -1.9
ITGB1-219ENST00000534049 R4GMQ9 66 aa3.18□□□□□ -1.9
ITGB1-219ENST00000534049 ATMQ13315 3056 aa3.18□□□□□ -1.9
ITGB1-219ENST00000534049 ASH1LQ9NR48 2969 aaKnown RBP3.18□□□□□ -1.9
ITGB1-219ENST00000534049 TRBV20OR9-2A0A075B6H5 130 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 TRBV10-2A0A0K0K1G8 114 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 PGPA6NDG6 321 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 H3BMM0 161 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 UPK2O00526 184 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 CCL22O00626 93 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 LYPD3O95274 346 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 IGLV3-27P01718 113 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 CISD3P0C7P0 127 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 GP1BBP13224 206 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 CD59P13987 128 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 MAGEA5P43359 124 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 HIST1H4AP62805 103 aaKnown RBP3.17□□□□□ -1.9
ITGB1-219ENST00000534049 RPL18Q07020 188 aaKnown RBP3.17□□□□□ -1.9
ITGB1-219ENST00000534049 ATXN8Q156A1 80 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 CST6Q15828 149 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 ZNF56Q15929 161 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 RSPO1Q2MKA7 263 aaPredicted RBP3.17□□□□□ -1.9
ITGB1-219ENST00000534049 UBE2WQ96B02 151 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 MRPL53Q96EL3 112 aaKnown RBP3.17□□□□□ -1.9
ITGB1-219ENST00000534049 PAXXQ9BUH6 204 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 EMC6Q9BV81 110 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 AICDAQ9GZX7 198 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 SLC25A22Q9H936 323 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 DEC1Q9P2X7 70 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 LINC00527Q9UJ94 153 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 RPUSD1Q9UJJ7 312 aaKnown RBP3.17□□□□□ -1.9
ITGB1-219ENST00000534049 AMMECR1Q9Y4X0 333 aaPredicted RBP3.17□□□□□ -1.9
ITGB1-219ENST00000534049 SELENOKQ9Y6D0 94 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 CPAMD8Q8IZJ3 1885 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 ABCA7Q8IZY2 2146 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 NUP205Q92621 2012 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 NCKAP5O14513 1909 aa3.17□□□□□ -1.9
ITGB1-219ENST00000534049 ANKRD12Q6UB98 2062 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 ACACAQ13085 2346 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 SHROOM3Q8TF72 1996 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 HELZ2Q9BYK8 2649 aaKnown RBP3.16□□□□□ -1.9
ITGB1-219ENST00000534049 TRBV7-3A0A075B6L6 115 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 LOC107984156A0A0G2JMH3 177 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 hADV29S1A0JD25 119 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 NCBP2LA6PVI3 153 aaKnown RBP3.16□□□□□ -1.9
ITGB1-219ENST00000534049 K7ERJ3 54 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 TCL1BO95988 128 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 IGKV1D-33P01593 117 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 IGKV1-33P01594 117 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 IGLV3-25P01717 112 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 HBDP02042 147 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 IGF1P05019 195 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 UBE2D1P51668 147 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 GFERP55789 205 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 PCBD1P61457 104 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 HERVK_113P61574 105 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 RPL18AQ02543 176 aaKnown RBP3.16□□□□□ -1.9
ITGB1-219ENST00000534049 SP6Q3SY56 376 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 Q6ZRP5 223 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 ARL17AQ8IVW1 177 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 DEFB119Q8N690 84 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 PFN4Q8NHR9 129 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 BRK1Q8WUW1 75 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 FMC1Q96HJ9 113 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 ARHGAP5-AS1Q96IT6 56 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 S1PR3Q99500 378 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 FOXC2Q99958 501 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 HES7Q9BYE0 225 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 TTTY10Q9BZA0 68 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 DAZ1Q9NQZ3 744 aaKnown RBP3.16□□□□□ -1.9
ITGB1-219ENST00000534049 OTORQ9NRC9 128 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 F11RQ9Y624 299 aaKnown RBP3.16□□□□□ -1.9
ITGB1-219ENST00000534049 PIKFYVEQ9Y2I7 2098 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 MGAQ8IWI9 3026 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 BOD1L1Q8NFC6 3051 aa3.16□□□□□ -1.9
ITGB1-219ENST00000534049 GCN1Q92616 2671 aaKnown RBP3.16□□□□□ -1.9
ITGB1-219ENST00000534049 ATG2BQ96BY7 2078 aa3.15□□□□□ -1.9
ITGB1-219ENST00000534049 GON4LQ3T8J9 2241 aa3.15□□□□□ -1.9
ITGB1-219ENST00000534049 ZNF462Q96JM2 2506 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 A0A0B4J2C4 111 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 IGHV1-58A0A0C4DH39 117 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 A0A1B0GTH9 108 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 A0A1B0GWA3 101 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 PLAC8L1A1L4L8 177 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 LYRM9A8MSI8 78 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 PRSS46E5RG02 174 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 H3BVH4 76 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 NDUFB3O43676 98 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 NDUFC1O43677 76 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 OXTP01178 125 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms