RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 NUPR1O60356 82 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 CBLN1P23435 193 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 RPL27AP46776 148 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 FUT5Q11128 374 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 NMSQ5H8A3 153 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 AGPAT4-IT1Q9H0P7 198 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 FAM60AQ9NP50 221 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 SCRT2Q9NQ03 307 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 C19orf84I3L1E1 186 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 EBI3Q14213 229 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 NOXRED1Q6NXP6 359 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 ADM2Q7Z4H4 148 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 PCP2Q8IVA1 136 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 OPRPNQ99935 248 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 TTTY13Q9BZ97 58 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 TRAPPC1Q9Y5R8 145 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 RBAKDNA6NC62 111 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 SDCBPO00560 298 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 TLX1NBP0CAT3 122 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 LYZP61626 148 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 KISS1Q15726 138 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 C7orf65Q6ZTY9 151 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 PPP1R1CQ8WVI7 109 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 RBMXL1Q96E39 390 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 C11orf1Q9H5F2 150 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 SRCAPQ6ZRS2 3230 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 LRP4O75096 1905 aa3.63□□□□□ -1.83
ECHDC1-222ENST00000531967 RBP4P02753 201 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 NANOS2P60321 138 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 DEFB132Q7Z7B7 95 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 CLECL1Q8IZS7 167 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 CEND1Q8N111 149 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 C15orf56Q8N910 161 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 ZNF714Q96N38 554 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 XAGE1AQ9HD64 81 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 PRO0461Q9UI25 63 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 LOC730098B7Z3J9 87 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 IGHV3-7P01780 117 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 HBDP02042 147 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 C3orf79P0CE67 100 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 SMIM13P0DJ93 91 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 IGHV3-30-3P0DP02 117 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 CCL3P10147 92 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 HIST1H4AP62805 103 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 ZC2HC1BQ5TFG8 222 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 TMEM136Q6ZRR5 245 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 MIR17HGQ75NE6 70 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 COPS9Q8WXC6 57 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 AQP3Q92482 292 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 DIRC1Q969H9 104 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 LITAFQ99732 161 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 DEFB126Q9BYW3 111 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 NMES1Q9C002 83 aa3.62□□□□□ -1.83
ECHDC1-222ENST00000531967 PTHLHP12272 177 aa3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 INSL4Q14641 139 aa3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 ZNF791Q3KP31 576 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 LINC01545Q5VT33 79 aa3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 HMGN2P46Q86SG4 172 aa3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 BAGE3Q86Y29 109 aa3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 BAGE2Q86Y30 109 aa3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 TNFRSF19Q9NS68 423 aa3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 HCFC1P51610 2035 aa3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 CPSF4O95639 269 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 P0C879 139 aa3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 COX7CP15954 63 aa3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 C14orf178Q8N769 122 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 CIRBP-AS1Q8TBR5 109 aa3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 LINC00479Q96M42 142 aa3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 MDC1Q14676 2089 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-222ENST00000531967 COL4A2P08572 1712 aa3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 H3BT86 120 aa3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 CCL22O00626 93 aa3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 NTM-AS1Q6ZSK4 140 aa3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 LSM10Q969L4 123 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 SDF2L1Q9HCN8 221 aa3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 TP53TG3Q9ULZ0 132 aa3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 PLXNB1O43157 2135 aa3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 KIAA1549LQ6ZVL6 1849 aa3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 FAM24AA6NFZ4 105 aa3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 A8MWP4 228 aa3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 HLA-DQA1P01909 254 aa3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 CDK5R1Q15078 307 aa3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 ZFP2Q6ZN57 461 aa3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 C16orf47Q6ZP98 133 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 FAM103A1Q9BTL3 118 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-222ENST00000531967 A6NED7 52 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 A6NIN4 97 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 IGHV4-34P06331 123 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 FXYD7P58549 80 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 Q1RN00 199 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 SOSTDC1Q6X4U4 206 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 OR8B3Q8NGG8 313 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 DSCR8Q96T75 97 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 IGKV3D-20A0A0C4DH25 116 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 TRBV7-7A0A0K0K1E9 115 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 CCL5P13501 91 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 C16orf74Q96GX8 76 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 SCGB3A1Q96QR1 104 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 SERP1Q9Y6X1 66 aa3.59□□□□□ -1.83
ECHDC1-222ENST00000531967 TANC2Q9HCD6 1990 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms