RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 LINC00612Q8N6U2 182 aa13.17□□□□□ -0.3
GMDS-208ENST00000530927 LINC00467Q9BRT7 94 aa13.17□□□□□ -0.3
GMDS-208ENST00000530927 ATG101Q9BSB4 218 aa13.17□□□□□ -0.3
GMDS-208ENST00000530927 CARHSP1Q9Y2V2 147 aaKnown RBP13.17□□□□□ -0.3
GMDS-208ENST00000530927 TRBV7-9A0A0J9YWB2 115 aa13.16□□□□□ -0.3
GMDS-208ENST00000530927 ANXA2RQ3ZCQ2 193 aa13.16□□□□□ -0.3
GMDS-208ENST00000530927 ZNF506Q5JVG8 444 aa13.16□□□□□ -0.3
GMDS-208ENST00000530927 LINC00479Q96M42 142 aa13.16□□□□□ -0.3
GMDS-208ENST00000530927 C8orf49Q96NF6 230 aa13.16□□□□□ -0.3
GMDS-208ENST00000530927 EIF5A2Q9GZV4 153 aaKnown RBP13.16□□□□□ -0.3
GMDS-208ENST00000530927 FRAS1Q86XX4 4008 aa13.16□□□□□ -0.3
GMDS-208ENST00000530927 PEX7O00628 323 aa13.15□□□□□ -0.3
GMDS-208ENST00000530927 PDE6DO43924 150 aa13.15□□□□□ -0.3
GMDS-208ENST00000530927 IGLV2-11P01706 119 aa13.15□□□□□ -0.3
GMDS-208ENST00000530927 ATP5G1P05496 136 aa13.15□□□□□ -0.3
GMDS-208ENST00000530927 Q6AWC8 147 aa13.15□□□□□ -0.3
GMDS-208ENST00000530927 SVBPQ8N300 66 aa13.15□□□□□ -0.3
GMDS-208ENST00000530927 CYB561D1Q8N8Q1 229 aa13.15□□□□□ -0.3
GMDS-208ENST00000530927 NAGKQ9UJ70 344 aa13.15□□□□□ -0.3
GMDS-208ENST00000530927 EPPK1P58107 5090 aaKnown RBP13.15□□□□□ -0.3
GMDS-208ENST00000530927 TRAV34A0A0B4J273 112 aa13.14□□□□□ -0.31
GMDS-208ENST00000530927 HOXA5P20719 270 aa13.14□□□□□ -0.31
GMDS-208ENST00000530927 DAZ2Q13117 558 aaKnown RBP13.14□□□□□ -0.31
GMDS-208ENST00000530927 SEC11CQ9BY50 192 aa13.14□□□□□ -0.31
GMDS-208ENST00000530927 TREM1Q9NP99 234 aa13.14□□□□□ -0.31
GMDS-208ENST00000530927 MDFICQ9P1T7 246 aa13.14□□□□□ -0.31
GMDS-208ENST00000530927 LENEPQ9Y5L5 61 aa13.14□□□□□ -0.31
GMDS-208ENST00000530927 DNAH10Q8IVF4 4471 aa13.14□□□□□ -0.31
GMDS-208ENST00000530927 TRGV1A0A0A0MS02 117 aa13.13□□□□□ -0.31
GMDS-208ENST00000530927 FBLL1A6NHQ2 334 aaKnown RBP13.13□□□□□ -0.31
GMDS-208ENST00000530927 APOC3P02656 99 aa13.13□□□□□ -0.31
GMDS-208ENST00000530927 ZNF80P51504 273 aaPredicted RBP13.13□□□□□ -0.31
GMDS-208ENST00000530927 TCL1AP56279 114 aa13.13□□□□□ -0.31
GMDS-208ENST00000530927 MRPL16Q9NX20 251 aaKnown RBP13.13□□□□□ -0.31
GMDS-208ENST00000530927 PSG8Q9UQ74 426 aa13.13□□□□□ -0.31
GMDS-208ENST00000530927 NDUFS6O75380 124 aaKnown RBP13.13□□□□□ -0.31
GMDS-208ENST00000530927 SCO1O75880 301 aa13.13□□□□□ -0.31
GMDS-208ENST00000530927 PRNTQ86SH4 94 aa13.13□□□□□ -0.31
GMDS-208ENST00000530927 TMEM75Q8N9X5 138 aa13.13□□□□□ -0.31
GMDS-208ENST00000530927 SMDT1Q9H4I9 107 aa13.13□□□□□ -0.31
GMDS-208ENST00000530927 SCO2A0A1W2PP80 73 aa13.12□□□□□ -0.31
GMDS-208ENST00000530927 OR5I1Q13606 314 aa13.12□□□□□ -0.31
GMDS-208ENST00000530927 PEA15Q15121 130 aa13.12□□□□□ -0.31
GMDS-208ENST00000530927 TMEM183BQ1AE95 376 aa13.12□□□□□ -0.31
GMDS-208ENST00000530927 TMEM183AQ8IXX5 376 aa13.12□□□□□ -0.31
GMDS-208ENST00000530927 C11orf52Q96A22 123 aa13.12□□□□□ -0.31
GMDS-208ENST00000530927 FAM210BQ96KR6 192 aa13.12□□□□□ -0.31
GMDS-208ENST00000530927 TMA7Q9Y2S6 64 aaKnown RBP13.12□□□□□ -0.31
GMDS-208ENST00000530927 DNAH2Q9P225 4427 aa13.11□□□□□ -0.31
GMDS-208ENST00000530927 GNRH2O43555 120 aa13.11□□□□□ -0.31
GMDS-208ENST00000530927 SPINK4O60575 86 aa13.11□□□□□ -0.31
GMDS-208ENST00000530927 S100A9P06702 114 aaKnown RBP13.11□□□□□ -0.31
GMDS-208ENST00000530927 AKR1C3P42330 323 aa13.11□□□□□ -0.31
GMDS-208ENST00000530927 FLI1Q01543 452 aaPredicted RBP13.11□□□□□ -0.31
GMDS-208ENST00000530927 IBA57Q5T440 356 aaKnown RBP13.11□□□□□ -0.31
GMDS-208ENST00000530927 C11orf21Q9P2W6 132 aa13.11□□□□□ -0.31
GMDS-208ENST00000530927 A0A0J9YY99 117 aa13.1□□□□□ -0.31
GMDS-208ENST00000530927 TMEM250H0YL14 139 aa13.1□□□□□ -0.31
GMDS-208ENST00000530927 SNAPINO95295 136 aa13.1□□□□□ -0.31
GMDS-208ENST00000530927 NUDT3O95989 172 aa13.1□□□□□ -0.31
GMDS-208ENST00000530927 FAM159AQ6UWV7 190 aa13.1□□□□□ -0.31
GMDS-208ENST00000530927 FMC1Q96HJ9 113 aa13.1□□□□□ -0.31
GMDS-208ENST00000530927 TRAV26-1A0A087WT03 109 aa13.09□□□□□ -0.31
GMDS-208ENST00000530927 IGHV3-53P01767 116 aa13.09□□□□□ -0.31
GMDS-208ENST00000530927 P0DMU3 169 aa13.09□□□□□ -0.31
GMDS-208ENST00000530927 FAM231AP0DMU4 169 aa13.09□□□□□ -0.31
GMDS-208ENST00000530927 FAM231CP0DMU5 169 aa13.09□□□□□ -0.31
GMDS-208ENST00000530927 UBE2G1P62253 170 aa13.09□□□□□ -0.31
GMDS-208ENST00000530927 ZNF415Q09FC8 603 aa13.09□□□□□ -0.31
GMDS-208ENST00000530927 TRGV2A0A075B6R0 118 aa13.08□□□□□ -0.32
GMDS-208ENST00000530927 TRAV21A0A0B4J279 112 aa13.08□□□□□ -0.32
GMDS-208ENST00000530927 TRBV6-1A0A0K0K1D8 114 aa13.08□□□□□ -0.32
GMDS-208ENST00000530927 F8W036 122 aa13.08□□□□□ -0.32
GMDS-208ENST00000530927 TYMSP04818 313 aa13.08□□□□□ -0.32
GMDS-208ENST00000530927 POM121L12Q8N7R1 296 aa13.08□□□□□ -0.32
GMDS-208ENST00000530927 NDFIP1Q9BT67 221 aa13.08□□□□□ -0.32
GMDS-208ENST00000530927 GCGP01275 180 aa13.07□□□□□ -0.32
GMDS-208ENST00000530927 SRP19P09132 144 aaKnown RBP13.07□□□□□ -0.32
GMDS-208ENST00000530927 SRSF3P84103 164 aaKnown RBP13.07□□□□□ -0.32
GMDS-208ENST00000530927 SAPCD1Q5SSQ6 148 aa13.07□□□□□ -0.32
GMDS-208ENST00000530927 IGHV3-16A0A0C4DH30 117 aa13.06□□□□□ -0.32
GMDS-208ENST00000530927 M0R2N4 97 aa13.06□□□□□ -0.32
GMDS-208ENST00000530927 RPL35P42766 123 aaKnown RBP13.06□□□□□ -0.32
GMDS-208ENST00000530927 TDRG1Q3Y452 100 aa13.06□□□□□ -0.32
GMDS-208ENST00000530927 Q86TA4 180 aa13.06□□□□□ -0.32
GMDS-208ENST00000530927 UBE2DNLQ8IWF7 75 aa13.06□□□□□ -0.32
GMDS-208ENST00000530927 C15orf53Q8NAA6 179 aa13.06□□□□□ -0.32
GMDS-208ENST00000530927 ZFP30Q9Y2G7 519 aa13.06□□□□□ -0.32
GMDS-208ENST00000530927 IGLV2-18A0A075B6J9 118 aa13.05□□□□□ -0.32
GMDS-208ENST00000530927 LOC105371267A0A1B0GV96 52 aa13.05□□□□□ -0.32
GMDS-208ENST00000530927 DERL1Q9BUN8 251 aa13.05□□□□□ -0.32
GMDS-208ENST00000530927 NACAE9PAV3 2078 aa13.05□□□□□ -0.32
GMDS-208ENST00000530927 TRGV11A0A075B6L2 103 aa13.05□□□□□ -0.32
GMDS-208ENST00000530927 LTAP01374 205 aa13.05□□□□□ -0.32
GMDS-208ENST00000530927 ADCYAP1P18509 176 aa13.05□□□□□ -0.32
GMDS-208ENST00000530927 SMUG1Q53HV7 270 aa13.05□□□□□ -0.32
GMDS-208ENST00000530927 VSIG2Q96IQ7 327 aa13.05□□□□□ -0.32
GMDS-208ENST00000530927 C9JQL5 133 aa13.04□□□□□ -0.32
GMDS-208ENST00000530927 SFTA3P0C7M3 94 aa13.04□□□□□ -0.32
GMDS-208ENST00000530927 CEBPGP53567 150 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms