RNA–Protein interactions for RNA: ENST00000529764.1

LTBP3-215, Transcript of latent transforming growth factor beta binding protein 3, human

TSL 5

Gene LTBP3, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP3-215	ENST00000529764	C11orf72	Q8NBR9	251 aa		4.62	□□□□□ -1.67
LTBP3-215	ENST00000529764	OR4C5	Q8NGB2	326 aa		4.62	□□□□□ -1.67
LTBP3-215	ENST00000529764	MRPL16	Q9NX20	251 aa	Known RBP	4.62	□□□□□ -1.67
LTBP3-215	ENST00000529764	MRPS16	Q9Y3D3	137 aa	Known RBP	4.62	□□□□□ -1.67
LTBP3-215	ENST00000529764	LINC00588	Q9Y4M8	146 aa		4.62	□□□□□ -1.67
LTBP3-215	ENST00000529764	TRAV4	A0A0B4J268	109 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764		A0A0D9SG52	128 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764		K7EP13	123 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	SIVA1	O15304	175 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	GCG	P01275	180 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	IGHV3-53	P01767	116 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	PFN1	P07737	140 aa	Known RBP	4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	RPL7L1	Q6DKI1	246 aa	Known RBP	4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764		Q6ZR54	194 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	NEGR1	Q7Z3B1	354 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	PRNT	Q86SH4	94 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	TMEM75	Q8N9X5	138 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	ZNRF2	Q8NHG8	242 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	RASL10A	Q92737	203 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	HIST1H2BA	Q96A08	127 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	TCEAL7	Q9BRU2	100 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	PRADC1	Q9BSG0	188 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	UPK3B	Q9BT76	320 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	TP53TG3	Q9ULZ0	132 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	EPDR1	Q9UM22	224 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764	PSG8	Q9UQ74	426 aa		4.61	□□□□□ -1.67
LTBP3-215	ENST00000529764		A0A096LPF7	62 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	MAP1LC3B2	A6NCE7	125 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	RNF222	A6NCQ9	220 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	FABP5P3	A8MUU1	101 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	UMAD1	C9J7I0	102 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	PFDN1	O60925	122 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	HOXA5	P20719	270 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	EVI2A	P22794	236 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	CRYBA4	P53673	196 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	GNG5	P63218	68 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	ZNF345	Q14585	488 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	PRR9	Q5T870	116 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	EIF5AL1	Q6IS14	154 aa	Known RBP	4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	NFE4	Q86UQ8	179 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	C8orf49	Q96NF6	230 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	MAP1LC3B	Q9GZQ8	125 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	PLEC	Q15149	4684 aa	Known RBP	4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	NACA	E9PAV3	2078 aa		4.6	□□□□□ -1.67
LTBP3-215	ENST00000529764	TRAV8-1	A0A0A6YYK1	113 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	HMSD	A8MTL9	139 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	RTL8C	O15255	209 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	EIF3G	O75821	320 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	TYMS	P04818	313 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	S100A9	P06702	114 aa	Known RBP	4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	ASIP	P42127	132 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	UBE2G2	P60604	165 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	ESRG	Q1W209	222 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	ZNF876P	Q49A33	203 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	CST9LP1	Q5W188	147 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	DPPA3	Q6W0C5	159 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	C10orf126	Q8N4M7	172 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	NHLRC2	Q8NBF2	726 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	SYT8	Q8NBV8	401 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	SUN5	Q8TC36	379 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	FMC1	Q96HJ9	113 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	SGK494	Q96LW2	274 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	ZNF471	Q9BX82	626 aa	Predicted RBP	4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	MDFIC	Q9P1T7	246 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	ZFP30	Q9Y2G7	519 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	LY96	Q9Y6Y9	160 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	ARL2-SNX15	V9GYD0	113 aa		4.59	□□□□□ -1.67
LTBP3-215	ENST00000529764	DNAH1	Q9P2D7	4330 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	TRAV8-6	A0A0B4J262	113 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	IGHV3-16	A0A0C4DH30	117 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764		A8MWV9	139 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	PEX7	O00628	323 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	GNRH2	O43555	120 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	NXPH4	O95158	308 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	SFTA3	P0C7M3	94 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	SEC11B	P0C7V7	166 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	MED14OS	P0DP75	135 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	TPT1	P13693	172 aa	Known RBP	4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	GYPE	P15421	78 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	AKR1C3	P42330	323 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	FHIT	P49789	147 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	FHL2	Q14192	279 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	RHOH	Q15669	191 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764		Q5BKY6	102 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	KCNRG	Q8N5I3	272 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	VSIG2	Q96IQ7	327 aa		4.58	□□□□□ -1.68
LTBP3-215	ENST00000529764	MUC4	Q99102	2169 aa		4.57	□□□□□ -1.68
LTBP3-215	ENST00000529764	TRBV6-4	A0A1B0GX49	114 aa		4.57	□□□□□ -1.68
LTBP3-215	ENST00000529764	FAM74A7	A6NL05	159 aa		4.57	□□□□□ -1.68
LTBP3-215	ENST00000529764		B4DEV8	164 aa		4.57	□□□□□ -1.68
LTBP3-215	ENST00000529764	GGTLC3	B5MD39	225 aa		4.57	□□□□□ -1.68
LTBP3-215	ENST00000529764		K7EQD1	137 aa		4.57	□□□□□ -1.68
LTBP3-215	ENST00000529764	BCL2L11	O43521	198 aa		4.57	□□□□□ -1.68
LTBP3-215	ENST00000529764	MGST1	P10620	155 aa	Known RBP	4.57	□□□□□ -1.68
LTBP3-215	ENST00000529764	FGF8	P55075	233 aa	Predicted RBP	4.57	□□□□□ -1.68
LTBP3-215	ENST00000529764	PIK3CD-AS1	Q5SR53	167 aa		4.57	□□□□□ -1.68
LTBP3-215	ENST00000529764	FAM162B	Q5T6X4	162 aa		4.57	□□□□□ -1.68
LTBP3-215	ENST00000529764	LYPD5	Q6UWN5	251 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms