RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 TMEM88Q6PEY1 159 aa13.9□□□□□ -0.18
EXOSC4-202ENST00000525936 C11orf21Q9P2W6 132 aa13.9□□□□□ -0.18
EXOSC4-202ENST00000525936 GCGP01275 180 aa13.89□□□□□ -0.19
EXOSC4-202ENST00000525936 PFN1P07737 140 aaKnown RBP13.89□□□□□ -0.19
EXOSC4-202ENST00000525936 TMEM183BQ1AE95 376 aa13.89□□□□□ -0.19
EXOSC4-202ENST00000525936 Q86TA4 180 aa13.89□□□□□ -0.19
EXOSC4-202ENST00000525936 TMEM183AQ8IXX5 376 aa13.89□□□□□ -0.19
EXOSC4-202ENST00000525936 TRGV11A0A075B6L2 103 aa13.88□□□□□ -0.19
EXOSC4-202ENST00000525936 F5H768 121 aa13.88□□□□□ -0.19
EXOSC4-202ENST00000525936 GNRH2O43555 120 aa13.88□□□□□ -0.19
EXOSC4-202ENST00000525936 ZNF415Q09FC8 603 aa13.88□□□□□ -0.19
EXOSC4-202ENST00000525936 FMC1Q96HJ9 113 aa13.88□□□□□ -0.19
EXOSC4-202ENST00000525936 ZFP30Q9Y2G7 519 aa13.88□□□□□ -0.19
EXOSC4-202ENST00000525936 TRGV1A0A0A0MS02 117 aa13.87□□□□□ -0.19
EXOSC4-202ENST00000525936 IGHV3-16A0A0C4DH30 117 aa13.87□□□□□ -0.19
EXOSC4-202ENST00000525936 KCNS1Q96KK3 526 aa13.87□□□□□ -0.19
EXOSC4-202ENST00000525936 SPXQ9BT56 116 aa13.87□□□□□ -0.19
EXOSC4-202ENST00000525936 DNAH6Q9C0G6 4158 aa13.87□□□□□ -0.19
EXOSC4-202ENST00000525936 TYMSP04818 313 aa13.86□□□□□ -0.19
EXOSC4-202ENST00000525936 HOXA5P20719 270 aa13.86□□□□□ -0.19
EXOSC4-202ENST00000525936 NKX2-5P52952 324 aaPredicted RBP13.86□□□□□ -0.19
EXOSC4-202ENST00000525936 RASL10AQ92737 203 aa13.86□□□□□ -0.19
EXOSC4-202ENST00000525936 MANBALQ9NQG1 85 aa13.86□□□□□ -0.19
EXOSC4-202ENST00000525936 NAGKQ9UJ70 344 aa13.86□□□□□ -0.19
EXOSC4-202ENST00000525936 LTAP01374 205 aa13.85□□□□□ -0.19
EXOSC4-202ENST00000525936 CRIP1P50238 77 aa13.85□□□□□ -0.19
EXOSC4-202ENST00000525936 C15orf53Q8NAA6 179 aa13.85□□□□□ -0.19
EXOSC4-202ENST00000525936 SDF2L1Q9HCN8 221 aa13.85□□□□□ -0.19
EXOSC4-202ENST00000525936 TRGV2A0A075B6R0 118 aa13.84□□□□□ -0.19
EXOSC4-202ENST00000525936 FABP5P3A8MUU1 101 aa13.84□□□□□ -0.19
EXOSC4-202ENST00000525936 TEX46H3BTG2 121 aa13.84□□□□□ -0.19
EXOSC4-202ENST00000525936 S100A9P06702 114 aaKnown RBP13.84□□□□□ -0.19
EXOSC4-202ENST00000525936 MRPL16Q9NX20 251 aaKnown RBP13.84□□□□□ -0.19
EXOSC4-202ENST00000525936 GNG13Q9P2W3 67 aa13.84□□□□□ -0.19
EXOSC4-202ENST00000525936 MUC4Q99102 2169 aa13.83□□□□□ -0.19
EXOSC4-202ENST00000525936 SCO2A0A1W2PP80 73 aa13.83□□□□□ -0.2
EXOSC4-202ENST00000525936 P0DMU3 169 aa13.83□□□□□ -0.2
EXOSC4-202ENST00000525936 FAM231AP0DMU4 169 aa13.83□□□□□ -0.2
EXOSC4-202ENST00000525936 FAM231CP0DMU5 169 aa13.83□□□□□ -0.2
EXOSC4-202ENST00000525936 UBE2G1P62253 170 aa13.83□□□□□ -0.2
EXOSC4-202ENST00000525936 ZC2HC1AQ96GY0 325 aa13.83□□□□□ -0.2
EXOSC4-202ENST00000525936 TXNDC17Q9BRA2 123 aa13.83□□□□□ -0.2
EXOSC4-202ENST00000525936 BOLA1Q9Y3E2 137 aa13.83□□□□□ -0.2
EXOSC4-202ENST00000525936 IGKV3D-20A0A0C4DH25 116 aa13.82□□□□□ -0.2
EXOSC4-202ENST00000525936 AKR1C3P42330 323 aa13.82□□□□□ -0.2
EXOSC4-202ENST00000525936 ALKAL2Q6UX46 152 aa13.82□□□□□ -0.2
EXOSC4-202ENST00000525936 ZNF575Q86XF7 245 aa13.82□□□□□ -0.2
EXOSC4-202ENST00000525936 MLST8Q9BVC4 326 aa13.82□□□□□ -0.2
EXOSC4-202ENST00000525936 H3BNG1 76 aa13.81□□□□□ -0.2
EXOSC4-202ENST00000525936 OR5I1Q13606 314 aa13.81□□□□□ -0.2
EXOSC4-202ENST00000525936 ZNF674Q2M3X9 581 aa13.81□□□□□ -0.2
EXOSC4-202ENST00000525936 C11orf52Q96A22 123 aa13.81□□□□□ -0.2
EXOSC4-202ENST00000525936 TRAV26-1A0A087WT03 109 aa13.8□□□□□ -0.2
EXOSC4-202ENST00000525936 M0R2P5 195 aa13.8□□□□□ -0.2
EXOSC4-202ENST00000525936 POM121L12Q8N7R1 296 aa13.8□□□□□ -0.2
EXOSC4-202ENST00000525936 LYPD6BQ8NI32 183 aa13.8□□□□□ -0.2
EXOSC4-202ENST00000525936 C9orf85Q96MD7 179 aa13.8□□□□□ -0.2
EXOSC4-202ENST00000525936 RNASE3P12724 160 aaKnown RBP13.79□□□□□ -0.2
EXOSC4-202ENST00000525936 RNF212Q495C1 297 aa13.79□□□□□ -0.2
EXOSC4-202ENST00000525936 PTH2Q96A98 100 aa13.79□□□□□ -0.2
EXOSC4-202ENST00000525936 SH2D1AO60880 128 aa13.78□□□□□ -0.2
EXOSC4-202ENST00000525936 MEF2BQ02080 365 aaPredicted RBP13.78□□□□□ -0.2
EXOSC4-202ENST00000525936 FHL2Q14192 279 aa13.78□□□□□ -0.2
EXOSC4-202ENST00000525936 DNLZQ5SXM8 178 aa13.78□□□□□ -0.2
EXOSC4-202ENST00000525936 FAM162BQ5T6X4 162 aa13.78□□□□□ -0.2
EXOSC4-202ENST00000525936 VSIG2Q96IQ7 327 aa13.78□□□□□ -0.2
EXOSC4-202ENST00000525936 KRBOX1C9JBD0 128 aa13.77□□□□□ -0.21
EXOSC4-202ENST00000525936 BCL2P10415 239 aa13.77□□□□□ -0.21
EXOSC4-202ENST00000525936 RPL35P42766 123 aaKnown RBP13.77□□□□□ -0.21
EXOSC4-202ENST00000525936 BLOC1S1P78537 153 aa13.77□□□□□ -0.21
EXOSC4-202ENST00000525936 A0A0J9YY99 117 aa13.76□□□□□ -0.21
EXOSC4-202ENST00000525936 NUDT3O95989 172 aa13.76□□□□□ -0.21
EXOSC4-202ENST00000525936 IFNA1P01562 189 aa13.76□□□□□ -0.21
EXOSC4-202ENST00000525936 TAGLN2P37802 199 aaKnown RBP13.76□□□□□ -0.21
EXOSC4-202ENST00000525936 BAGE2Q86Y30 109 aa13.76□□□□□ -0.21
EXOSC4-202ENST00000525936 ZNF479Q96JC4 524 aa13.76□□□□□ -0.21
EXOSC4-202ENST00000525936 DERL1Q9BUN8 251 aa13.76□□□□□ -0.21
EXOSC4-202ENST00000525936 VAX2Q9UIW0 290 aa13.76□□□□□ -0.21
EXOSC4-202ENST00000525936 DNAH10Q8IVF4 4471 aa13.75□□□□□ -0.21
EXOSC4-202ENST00000525936 B4DEV8 164 aa13.75□□□□□ -0.21
EXOSC4-202ENST00000525936 PDE6DO43924 150 aa13.75□□□□□ -0.21
EXOSC4-202ENST00000525936 IGHV3-53P01767 116 aa13.75□□□□□ -0.21
EXOSC4-202ENST00000525936 ORM1P02763 201 aa13.75□□□□□ -0.21
EXOSC4-202ENST00000525936 SLAQ13239 276 aa13.75□□□□□ -0.21
EXOSC4-202ENST00000525936 LINC01559Q495D7 138 aa13.75□□□□□ -0.21
EXOSC4-202ENST00000525936 NHLRC2Q8NBF2 726 aa13.75□□□□□ -0.21
EXOSC4-202ENST00000525936 TRAV4A0A0B4J268 109 aa13.74□□□□□ -0.21
EXOSC4-202ENST00000525936 ZNF876PQ49A33 203 aa13.74□□□□□ -0.21
EXOSC4-202ENST00000525936 PRO0255Q9UI72 69 aa13.74□□□□□ -0.21
EXOSC4-202ENST00000525936 HHLA3Q9XRX5 114 aa13.74□□□□□ -0.21
EXOSC4-202ENST00000525936 DNAH2Q9P225 4427 aa13.73□□□□□ -0.21
EXOSC4-202ENST00000525936 PGPEP1LA6NFU8 196 aa13.73□□□□□ -0.21
EXOSC4-202ENST00000525936 IGLV2-8P01709 118 aa13.73□□□□□ -0.21
EXOSC4-202ENST00000525936 SFTA3P0C7M3 94 aa13.73□□□□□ -0.21
EXOSC4-202ENST00000525936 CRYBA4P53673 196 aa13.73□□□□□ -0.21
EXOSC4-202ENST00000525936 FAM3BP58499 235 aaPredicted RBP13.73□□□□□ -0.21
EXOSC4-202ENST00000525936 PIK3CD-AS1Q5SR53 167 aa13.73□□□□□ -0.21
EXOSC4-202ENST00000525936 IL36BQ9NZH7 164 aa13.73□□□□□ -0.21
EXOSC4-202ENST00000525936 ASIPP42127 132 aa13.72□□□□□ -0.21
EXOSC4-202ENST00000525936 OR4C5Q8NGB2 326 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms