RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 ANGPTL5Q86XS5 388 aa0.52□□□□□ -2.33
CD44-215ENST00000525241 KRTAP2-1Q9BYU5 128 aa0.52□□□□□ -2.33
CD44-215ENST00000525241 ORMDL1Q9P0S3 153 aa0.52□□□□□ -2.33
CD44-215ENST00000525241 LAMTOR3Q9UHA4 124 aa0.52□□□□□ -2.33
CD44-215ENST00000525241 MED31Q9Y3C7 131 aa0.52□□□□□ -2.33
CD44-215ENST00000525241 V9GYQ6 96 aa0.52□□□□□ -2.33
CD44-215ENST00000525241 ERCC6Q03468 1493 aa0.52□□□□□ -2.33
CD44-215ENST00000525241 HELZP42694 1942 aaKnown RBP0.52□□□□□ -2.33
CD44-215ENST00000525241 CD2P06729 351 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 BCL2P10415 239 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 NEFHP12036 1026 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 COX7CP15954 63 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 S100A11P31949 105 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 EIF3IQ13347 325 aaKnown RBP0.51□□□□□ -2.33
CD44-215ENST00000525241 KIAA0100Q14667 2235 aaKnown RBP0.51□□□□□ -2.33
CD44-215ENST00000525241 Q5XG85 94 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 C2orf82Q6UX34 121 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 FOXI2Q6ZQN5 318 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 ZCCHC23Q6ZST2 131 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 RBBP6Q7Z6E9 1792 aaKnown RBP0.51□□□□□ -2.33
CD44-215ENST00000525241 FAM216BQ8N7L0 139 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 DLC1Q96QB1 1528 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 AMELYQ99218 206 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 NAT8BQ9UHF3 227 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 ADGRG4Q8IZF6 3080 aa0.51□□□□□ -2.33
CD44-215ENST00000525241 ABCA1O95477 2261 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 ESPL1Q14674 2120 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 PTPRMP28827 1452 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 CHD9Q3L8U1 2897 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 H3BQV1 296 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 KPNA4O00629 521 aaPredicted RBP0.5□□□□□ -2.33
CD44-215ENST00000525241 IGHV3-33P01772 117 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 IFNA4P05014 189 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 PSG9Q00887 426 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 FAM74A1Q5RGS3 127 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 GLIPR1L1Q6UWM5 242 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 SBSPONQ8IVN8 264 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 OR4K15Q8NH41 348 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 EFCAB11Q9BUY7 163 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 NIT2Q9NQR4 276 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 MED11Q9P086 117 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 MYCBP2O75592 4640 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 FRAS1Q86XX4 4008 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 MYH13Q9UKX3 1938 aa0.5□□□□□ -2.33
CD44-215ENST00000525241 CLASP1Q7Z460 1538 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 LRRC7Q96NW7 1537 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 DOPEY2Q9Y3R5 2298 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 SPAG17Q6Q759 2223 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 MED13LQ71F56 2210 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 LOC107984640A0A0U1RRK4 108 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 OR2T8A6NH00 312 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 E7EQ34 232 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 H0YJX3 145 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 IFNA21P01568 189 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 CCL4P13236 92 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 TMEM128Q5BJH2 165 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 HAGHLQ6PII5 290 aaPredicted RBP0.49□□□□□ -2.33
CD44-215ENST00000525241 LRRC18Q8N456 261 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.49□□□□□ -2.33
CD44-215ENST00000525241 PLPP5Q8NEB5 264 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 OR10AG1Q8NH19 301 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 NAT14Q8WUY8 206 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 DYDC1Q8WWB3 177 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 ISOC1Q96CN7 298 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 ZNF714Q96N38 554 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 CCDC115Q96NT0 180 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 MCEEQ96PE7 176 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 CDK5RAP2Q96SN8 1893 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 MAP2P11137 1827 aaKnown RBP0.49□□□□□ -2.33
CD44-215ENST00000525241 PTPRQQ9UMZ3 2332 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 ALKQ9UM73 1620 aa0.49□□□□□ -2.33
CD44-215ENST00000525241 TACC2O95359 2948 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 MYH6P13533 1939 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 TRBV27A0A0K0K1C4 114 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 KLF7O75840 302 aaPredicted RBP0.48□□□□□ -2.33
CD44-215ENST00000525241 IGLV3-1P01715 115 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 FABP4P15090 132 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 EFNA4P52798 201 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 MIR22HGQ0VDD5 57 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 DEFB132Q7Z7B7 95 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 TAC4Q86UU9 113 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 MORN4Q8NDC4 146 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 BORCS5Q969J3 196 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 CBLN4Q9NTU7 201 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 CHD7Q9P2D1 2997 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 CC2D2AQ9P2K1 1620 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 EHBP1L1Q8N3D4 1523 aa0.48□□□□□ -2.33
CD44-215ENST00000525241 ZCCHC6Q5VYS8 1495 aaKnown RBP0.48□□□□□ -2.33
CD44-215ENST00000525241 AFDNP55196 1824 aaKnown RBP0.48□□□□□ -2.33
CD44-215ENST00000525241 ANKRD30AQ9BXX3 1397 aa0.47□□□□□ -2.33
CD44-215ENST00000525241 RIMS1Q86UR5 1692 aaKnown RBP0.47□□□□□ -2.33
CD44-215ENST00000525241 A0A0J9YY99 117 aa0.47□□□□□ -2.33
CD44-215ENST00000525241 A6NN06 94 aa0.47□□□□□ -2.33
CD44-215ENST00000525241 F8W1H4 67 aa0.47□□□□□ -2.33
CD44-215ENST00000525241 SMIM15Q7Z3B0 74 aa0.47□□□□□ -2.33
CD44-215ENST00000525241 IFT20Q8IY31 132 aa0.47□□□□□ -2.33
CD44-215ENST00000525241 SELENOSQ9BQE4 189 aa0.47□□□□□ -2.33
CD44-215ENST00000525241 CCDC32Q9BV29 185 aa0.47□□□□□ -2.33
CD44-215ENST00000525241 LAMTOR2Q9Y2Q5 125 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms