RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 PFN1P07737 140 aaKnown RBP17.25■□□□□ 0.35
PVT1-219ENST00000523427 H2AFB2P0C5Z0 115 aa17.25■□□□□ 0.35
PVT1-219ENST00000523427 WFDC2Q14508 124 aa17.25■□□□□ 0.35
PVT1-219ENST00000523427 F6UZH7 168 aa17.24■□□□□ 0.35
PVT1-219ENST00000523427 LECT2O14960 151 aa17.24■□□□□ 0.35
PVT1-219ENST00000523427 TYMSP04818 313 aa17.24■□□□□ 0.35
PVT1-219ENST00000523427 SLC25A29Q8N8R3 303 aa17.24■□□□□ 0.35
PVT1-219ENST00000523427 WDR61Q9GZS3 305 aaKnown RBP17.24■□□□□ 0.35
PVT1-219ENST00000523427 LENEPQ9Y5L5 61 aa17.24■□□□□ 0.35
PVT1-219ENST00000523427 DNAH8Q96JB1 4490 aa17.23■□□□□ 0.35
PVT1-219ENST00000523427 FBLL1A6NHQ2 334 aaKnown RBP17.23■□□□□ 0.35
PVT1-219ENST00000523427 TDRG1Q3Y452 100 aa17.23■□□□□ 0.35
PVT1-219ENST00000523427 KCNIP2Q9NS61 270 aa17.23■□□□□ 0.35
PVT1-219ENST00000523427 SIX6O95475 246 aa17.22■□□□□ 0.35
PVT1-219ENST00000523427 LRRC37A5PQ49AS3 106 aa17.22■□□□□ 0.35
PVT1-219ENST00000523427 CMTM2Q8TAZ6 248 aa17.22■□□□□ 0.35
PVT1-219ENST00000523427 PRADC1Q9BSG0 188 aa17.22■□□□□ 0.35
PVT1-219ENST00000523427 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.21■□□□□ 0.35
PVT1-219ENST00000523427 TRAV21A0A0B4J279 112 aa17.21■□□□□ 0.35
PVT1-219ENST00000523427 PGPA6NDG6 321 aa17.21■□□□□ 0.35
PVT1-219ENST00000523427 KRTAP29-1A8MX34 341 aaPredicted RBP17.21■□□□□ 0.35
PVT1-219ENST00000523427 C17orf112F2Z3M2 114 aa17.21■□□□□ 0.35
PVT1-219ENST00000523427 Q8N3U1 123 aa17.21■□□□□ 0.35
PVT1-219ENST00000523427 NMES1Q9C002 83 aa17.21■□□□□ 0.35
PVT1-219ENST00000523427 SDF2L1Q9HCN8 221 aa17.21■□□□□ 0.35
PVT1-219ENST00000523427 OR5AC2Q9NZP5 309 aa17.21■□□□□ 0.35
PVT1-219ENST00000523427 C1QBP02746 253 aa17.2■□□□□ 0.34
PVT1-219ENST00000523427 FFAR4Q5NUL3 377 aa17.2■□□□□ 0.34
PVT1-219ENST00000523427 GOLT1AQ6ZVE7 132 aa17.2■□□□□ 0.34
PVT1-219ENST00000523427 TM2D2Q9BX73 214 aa17.2■□□□□ 0.34
PVT1-219ENST00000523427 LINC01620Q4KN68 170 aa17.19■□□□□ 0.34
PVT1-219ENST00000523427 LELP1Q5T871 98 aa17.19■□□□□ 0.34
PVT1-219ENST00000523427 DEFB104AQ8WTQ1 72 aa17.19■□□□□ 0.34
PVT1-219ENST00000523427 TREM1Q9NP99 234 aa17.19■□□□□ 0.34
PVT1-219ENST00000523427 TRAV8-1A0A0A6YYK1 113 aa17.18■□□□□ 0.34
PVT1-219ENST00000523427 RHOHQ15669 191 aa17.18■□□□□ 0.34
PVT1-219ENST00000523427 ZNF876PQ49A33 203 aa17.18■□□□□ 0.34
PVT1-219ENST00000523427 KHDC3LQ587J8 217 aa17.18■□□□□ 0.34
PVT1-219ENST00000523427 TMED6Q8WW62 240 aa17.18■□□□□ 0.34
PVT1-219ENST00000523427 ASB13Q8WXK3 278 aa17.18■□□□□ 0.34
PVT1-219ENST00000523427 TVP23CQ96ET8 276 aa17.18■□□□□ 0.34
PVT1-219ENST00000523427 ATP5SQ99766 215 aa17.18■□□□□ 0.34
PVT1-219ENST00000523427 CFAP126Q5VTH2 177 aa17.17■□□□□ 0.34
PVT1-219ENST00000523427 DPPA3Q6W0C5 159 aa17.17■□□□□ 0.34
PVT1-219ENST00000523427 ATP6V0E2Q8NHE4 81 aa17.17■□□□□ 0.34
PVT1-219ENST00000523427 SGK494Q96LW2 274 aa17.17■□□□□ 0.34
PVT1-219ENST00000523427 OTORQ9NRC9 128 aa17.17■□□□□ 0.34
PVT1-219ENST00000523427 MBD2Q9UBB5 411 aa17.17■□□□□ 0.34
PVT1-219ENST00000523427 FAM240BA0A1B0GVZ2 78 aa17.16■□□□□ 0.34
PVT1-219ENST00000523427 KCNS1Q96KK3 526 aa17.16■□□□□ 0.34
PVT1-219ENST00000523427 GTSF1LQ9H1H1 148 aa17.16■□□□□ 0.34
PVT1-219ENST00000523427 BOLA1Q9Y3E2 137 aa17.16■□□□□ 0.34
PVT1-219ENST00000523427 RS1O15537 224 aa17.15■□□□□ 0.34
PVT1-219ENST00000523427 TAS2R45P59539 299 aa17.15■□□□□ 0.34
PVT1-219ENST00000523427 FAM74A1Q5RGS3 127 aa17.15■□□□□ 0.34
PVT1-219ENST00000523427 Q6ZSA8 131 aa17.15■□□□□ 0.34
PVT1-219ENST00000523427 TRBV6-4A0A1B0GX49 114 aa17.14■□□□□ 0.33
PVT1-219ENST00000523427 H0YIZ8 118 aa17.14■□□□□ 0.33
PVT1-219ENST00000523427 GNG5P63218 68 aa17.14■□□□□ 0.33
PVT1-219ENST00000523427 BAALCQ8WXS3 180 aa17.13■□□□□ 0.33
PVT1-219ENST00000523427 SMIM3Q9BZL3 60 aa17.13■□□□□ 0.33
PVT1-219ENST00000523427 LAGE3Q14657 143 aa17.12■□□□□ 0.33
PVT1-219ENST00000523427 SCXQ7RTU7 201 aa17.11■□□□□ 0.33
PVT1-219ENST00000523427 DAZ4Q86SG3 579 aaKnown RBP17.11■□□□□ 0.33
PVT1-219ENST00000523427 SYT8Q8NBV8 401 aa17.11■□□□□ 0.33
PVT1-219ENST00000523427 SCGB1C1Q8TD33 95 aa17.11■□□□□ 0.33
PVT1-219ENST00000523427 DAZ3Q9NR90 486 aaKnown RBP17.11■□□□□ 0.33
PVT1-219ENST00000523427 GAGE12JA6NER3 117 aa17.1■□□□□ 0.33
PVT1-219ENST00000523427 GAGE1Q13065 139 aa17.1■□□□□ 0.33
PVT1-219ENST00000523427 GAGE4Q13068 117 aa17.1■□□□□ 0.33
PVT1-219ENST00000523427 GAGE5Q13069 117 aa17.1■□□□□ 0.33
PVT1-219ENST00000523427 GAGE13Q4V321 117 aa17.1■□□□□ 0.33
PVT1-219ENST00000523427 C11orf21Q9P2W6 132 aa17.1■□□□□ 0.33
PVT1-219ENST00000523427 TRAV8-3A0A0A6YYJ7 113 aa17.09■□□□□ 0.33
PVT1-219ENST00000523427 PGPEP1LA6NFU8 196 aa17.09■□□□□ 0.33
PVT1-219ENST00000523427 HMGB3O15347 200 aaKnown RBP17.09■□□□□ 0.33
PVT1-219ENST00000523427 SERTAD4-AS1Q5TG53 156 aa17.09■□□□□ 0.33
PVT1-219ENST00000523427 TMEM75Q8N9X5 138 aa17.09■□□□□ 0.33
PVT1-219ENST00000523427 RBFOX3A6NFN3 312 aa17.08■□□□□ 0.32
PVT1-219ENST00000523427 ZNF80P51504 273 aaPredicted RBP17.08■□□□□ 0.32
PVT1-219ENST00000523427 ZNF506Q5JVG8 444 aa17.08■□□□□ 0.32
PVT1-219ENST00000523427 NDFIP1Q9BT67 221 aa17.08■□□□□ 0.32
PVT1-219ENST00000523427 CIDEAO60543 219 aa17.07■□□□□ 0.32
PVT1-219ENST00000523427 MGST1P10620 155 aaKnown RBP17.07■□□□□ 0.32
PVT1-219ENST00000523427 A0A1W2PPV4 95 aa17.06■□□□□ 0.32
PVT1-219ENST00000523427 MZT2BQ6NZ67 158 aa17.06■□□□□ 0.32
PVT1-219ENST00000523427 LRP1Q07954 4544 aaKnown RBP17.06■□□□□ 0.32
PVT1-219ENST00000523427 GGTLC3B5MD39 225 aa17.05■□□□□ 0.32
PVT1-219ENST00000523427 GCGP01275 180 aa17.05■□□□□ 0.32
PVT1-219ENST00000523427 C9orf85Q96MD7 179 aa17.05■□□□□ 0.32
PVT1-219ENST00000523427 HSPB11Q9Y547 144 aa17.05■□□□□ 0.32
PVT1-219ENST00000523427 TAAR5O14804 337 aa17.04■□□□□ 0.32
PVT1-219ENST00000523427 TOR2AQ5JU69 321 aa17.04■□□□□ 0.32
PVT1-219ENST00000523427 OR2T35Q8NGX2 323 aa17.04■□□□□ 0.32
PVT1-219ENST00000523427 CCDC32Q9BV29 185 aa17.04■□□□□ 0.32
PVT1-219ENST00000523427 RAB2AP61019 212 aa17.03■□□□□ 0.32
PVT1-219ENST00000523427 ACOT6Q3I5F7 207 aaPredicted RBP17.03■□□□□ 0.32
PVT1-219ENST00000523427 PQLC2Q6ZP29 291 aa17.03■□□□□ 0.32
PVT1-219ENST00000523427 PPP1R1CQ8WVI7 109 aa17.03■□□□□ 0.32
PVT1-219ENST00000523427 DNAJC30Q96LL9 226 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms