RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 MXRA5Q9NR99 2828 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 TRBV19A0A075B6N1 114 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 TRBV7-9A0A0J9YWB2 115 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 CTXND1A0A1B0GTU2 59 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 RBMY1BA6NDE4 496 aaKnown RBP2.24□□□□□ -2.05
VPS13B-209ENST00000521559 RBMY1EA6NEQ0 496 aaKnown RBP2.24□□□□□ -2.05
VPS13B-209ENST00000521559 FBLL1A6NHQ2 334 aaKnown RBP2.24□□□□□ -2.05
VPS13B-209ENST00000521559 ISLRO14498 428 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 OR7C2O60412 319 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 EIF3GO75821 320 aaKnown RBP eCLIP2.24□□□□□ -2.05
VPS13B-209ENST00000521559 OR10J4P0C629 311 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 RBMY1DP0C7P1 496 aaKnown RBP2.24□□□□□ -2.05
VPS13B-209ENST00000521559 ZNF688P0C7X2 276 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 STAG3L2P0CL84 134 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 STAG3L3P0CL85 134 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 PYYP10082 97 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 GCHFRP30047 84 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 CDC34P49427 236 aaPredicted RBP2.24□□□□□ -2.05
VPS13B-209ENST00000521559 PSMB3P49720 205 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 RAB5CP51148 216 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 NKX2-5P52952 324 aaPredicted RBP2.24□□□□□ -2.05
VPS13B-209ENST00000521559 DEFB131AP59861 70 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 KRTAP10-8P60410 259 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 SNRPD3P62318 126 aaKnown RBP2.24□□□□□ -2.05
VPS13B-209ENST00000521559 PSG9Q00887 426 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 ZNF726P1Q15940 193 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 PSG3Q16557 428 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 KHDC3LQ587J8 217 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 DEFB121Q5J5C9 76 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 PSMG4Q5JS54 123 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 LCN15Q6UWW0 184 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 DPPA3Q6W0C5 159 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 FAM24BQ8N5W8 94 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 SUN5Q8TC36 379 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 LRRC20Q8TCA0 184 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 MBD3L1Q8WWY6 194 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 FXYD5Q96DB9 178 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 PHYHIPLQ96FC7 376 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 LINC00052Q96N35 136 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 LINC00167Q96N53 147 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 SLC50A1Q9BRV3 221 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 TPPP3Q9BW30 176 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 KRTAP4-3Q9BYR4 195 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 TUBA4BQ9H853 241 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 ZNF331Q9NQX6 463 aaPredicted RBP2.24□□□□□ -2.05
VPS13B-209ENST00000521559 ZNF586Q9NXT0 402 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 PRELID1Q9Y255 219 aa2.24□□□□□ -2.05
VPS13B-209ENST00000521559 ANK3Q12955 4377 aaKnown RBP2.24□□□□□ -2.05
VPS13B-209ENST00000521559 TET2Q6N021 2002 aaPredicted RBP2.24□□□□□ -2.05
VPS13B-209ENST00000521559 COL6A5A8TX70 2615 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 NIPBLQ6KC79 2804 aaeCLIP2.23□□□□□ -2.05
VPS13B-209ENST00000521559 SVEP1Q4LDE5 3571 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 LOC102724200A0A096LPH7 203 aaPredicted RBP2.23□□□□□ -2.05
VPS13B-209ENST00000521559 TRAV1-1A0A0B4J248 108 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 MAP1LC3B2A6NCE7 125 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 PGPA6NDG6 321 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 KNCNA6PVL3 124 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 H3BMM0 161 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 BOLA2-SMG1P6H3BVE0 249 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 SLC17A3O00476 420 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 HMGB3O15347 200 aaKnown RBP2.23□□□□□ -2.05
VPS13B-209ENST00000521559 DUSP14O95147 198 aaKnown RBP2.23□□□□□ -2.05
VPS13B-209ENST00000521559 CXorf1O96002 111 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 ARL14EPLP0DKL9 152 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 HLA-DMBP28068 263 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 SULT1A2P50226 295 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 RANP62826 216 aaKnown RBP2.23□□□□□ -2.05
VPS13B-209ENST00000521559 UBE2L3P68036 154 aaKnown RBP2.23□□□□□ -2.05
VPS13B-209ENST00000521559 PDE6HQ13956 83 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 ACTL10Q5JWF8 245 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 EBLN2Q6P2I7 272 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 MORN3Q6PF18 240 aaPredicted RBP2.23□□□□□ -2.05
VPS13B-209ENST00000521559 LINC00322Q6ZN03 302 aaPredicted RBP2.23□□□□□ -2.05
VPS13B-209ENST00000521559 FOXI2Q6ZQN5 318 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 APRG1Q8IVJ8 170 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 LYPD1Q8N2G4 141 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 DEFB125Q8N687 156 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 RNF182Q8N6D2 247 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 ARL6IP6Q8N6S5 226 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 ZNF738Q8NE65 137 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 OR8A1Q8NGG7 326 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 FAM213BQ8TBF2 198 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 RXFP4Q8TDU9 374 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 SFT2D1Q8WV19 159 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 BLNKQ8WV28 456 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 RPUSD4Q96CM3 377 aaKnown RBP2.23□□□□□ -2.05
VPS13B-209ENST00000521559 MAP1LC3BQ9GZQ8 125 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 WFDC10AQ9H1F0 79 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 SAV1Q9H4B6 383 aaPredicted RBP2.23□□□□□ -2.05
VPS13B-209ENST00000521559 OTORQ9NRC9 128 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 TMEM167BQ9NRX6 74 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 VPS13CQ709C8 3753 aa2.23□□□□□ -2.05
VPS13B-209ENST00000521559 KIR2DL5BA0A0G2JN68 375 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 KIR2DL5BA0A0G2JPC4 375 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 A0A0J9YX75 114 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 A0A1W2PRE2 83 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 A8MTW9 85 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 ZNF705FA8MVS1 300 aaPredicted RBP2.22□□□□□ -2.05
VPS13B-209ENST00000521559 ZNF705EA8MWA4 302 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms